; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI05G23560 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G23560
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionbinding partner of ACD11 1
Genome locationChr5:23595568..23598726
RNA-Seq ExpressionCSPI05G23560
SyntenyCSPI05G23560
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR034360 - Vip1-like, RNA recognition motif, plant
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574098.1 Binding partner of ACD11 1, partial [Cucurbita argyrosperma subsp. sororia]1.2e-11889.84Show/hide
Query:  KNMNPGGYTVEVTGLSPVATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGAKIVDQRVCITRWGHFDDEFGFWSRPPGHQEED
        +NMNPGGYTVEVTGLSP ATEKD+LDFFAFSGAIELVEIVRSGEDACTAYV+FKDAYSQETACLLSGA IVDQRVCITRWGHFD+EF FWSRP G+ EED
Subjt:  KNMNPGGYTVEVTGLSPVATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGAKIVDQRVCITRWGHFDDEFGFWSRPPGHQEED

Query:  STPASAQRSQFISSAGNAVTMAQEVVKTMLAMGYVLGKDTLTKAKAFDESHQVSATAAAKVADLSHRIGLTDMLGAGYEAVKSVDEKYHVLETTKSAISA
         TP SAQRSQF+S+AG AV+MAQ+VVKTMLAMGYVLGKDT TKAKAFDESHQVSATAAAKVADLS+RIGLTDM+GAGYEA K++DEKYHVL+TTKSAISA
Subjt:  STPASAQRSQFISSAGNAVTMAQEVVKTMLAMGYVLGKDTLTKAKAFDESHQVSATAAAKVADLSHRIGLTDMLGAGYEAVKSVDEKYHVLETTKSAISA

Query:  TGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLEH
        TGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGL+H
Subjt:  TGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLEH

KAG7013155.1 Binding partner of ACD11 1 [Cucurbita argyrosperma subsp. argyrosperma]4.1e-11990.24Show/hide
Query:  KNMNPGGYTVEVTGLSPVATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGAKIVDQRVCITRWGHFDDEFGFWSRPPGHQEED
        +NMNPGGYTVEVTGLSP ATEKD+LDFFAFSGAIELVEIVRSGEDACTAYV+FKDAYSQETACLLSGA IVDQRVCITRWGHFD+EF FWSRP G+ EED
Subjt:  KNMNPGGYTVEVTGLSPVATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGAKIVDQRVCITRWGHFDDEFGFWSRPPGHQEED

Query:  STPASAQRSQFISSAGNAVTMAQEVVKTMLAMGYVLGKDTLTKAKAFDESHQVSATAAAKVADLSHRIGLTDMLGAGYEAVKSVDEKYHVLETTKSAISA
         TP SAQRSQF+S+AG AV+MAQ+VVKTMLAMGYVLGKDT TKAKAFDESHQVSATAAAKVADLS+RIGLTDM+GAGYEA K++DEKYHVL+TTKSAISA
Subjt:  STPASAQRSQFISSAGNAVTMAQEVVKTMLAMGYVLGKDTLTKAKAFDESHQVSATAAAKVADLSHRIGLTDMLGAGYEAVKSVDEKYHVLETTKSAISA

Query:  TGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLEH
        TGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLEH
Subjt:  TGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLEH

XP_004135186.1 binding partner of ACD11 1 [Cucumis sativus]8.8e-130100Show/hide
Query:  MNPGGYTVEVTGLSPVATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGAKIVDQRVCITRWGHFDDEFGFWSRPPGHQEEDST
        MNPGGYTVEVTGLSPVATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGAKIVDQRVCITRWGHFDDEFGFWSRPPGHQEEDST
Subjt:  MNPGGYTVEVTGLSPVATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGAKIVDQRVCITRWGHFDDEFGFWSRPPGHQEEDST

Query:  PASAQRSQFISSAGNAVTMAQEVVKTMLAMGYVLGKDTLTKAKAFDESHQVSATAAAKVADLSHRIGLTDMLGAGYEAVKSVDEKYHVLETTKSAISATG
        PASAQRSQFISSAGNAVTMAQEVVKTMLAMGYVLGKDTLTKAKAFDESHQVSATAAAKVADLSHRIGLTDMLGAGYEAVKSVDEKYHVLETTKSAISATG
Subjt:  PASAQRSQFISSAGNAVTMAQEVVKTMLAMGYVLGKDTLTKAKAFDESHQVSATAAAKVADLSHRIGLTDMLGAGYEAVKSVDEKYHVLETTKSAISATG

Query:  RTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLEH
        RTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLEH
Subjt:  RTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLEH

XP_008446330.1 PREDICTED: binding partner of ACD11 1 [Cucumis melo]1.8e-12797.95Show/hide
Query:  MNPGGYTVEVTGLSPVATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGAKIVDQRVCITRWGHFDDEFGFWSRPPGHQEEDST
        MNPGGYTVEVTGLSP+ATEKDVLDFFAFSGAIELVEIVRSG+DACTAYVTFKDAYSQETACLLSGAKIVDQRVCITRWGHFDDEFGFWSRPPGHQEEDST
Subjt:  MNPGGYTVEVTGLSPVATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGAKIVDQRVCITRWGHFDDEFGFWSRPPGHQEEDST

Query:  PASAQRSQFISSAGNAVTMAQEVVKTMLAMGYVLGKDTLTKAKAFDESHQVSATAAAKVADLSHRIGLTDMLGAGYEAVKSVDEKYHVLETTKSAISATG
         ASAQRSQFISSAGNAVTMAQEVVKTMLAMGYVLGKDT TKAKAFDESHQVSATAAAKVADLSHRIGLTDMLGAG+EAVKSVDEKYHVLETTKSAISATG
Subjt:  PASAQRSQFISSAGNAVTMAQEVVKTMLAMGYVLGKDTLTKAKAFDESHQVSATAAAKVADLSHRIGLTDMLGAGYEAVKSVDEKYHVLETTKSAISATG

Query:  RTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLEH
        RTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLEH
Subjt:  RTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLEH

XP_038892042.1 binding partner of ACD11 1 [Benincasa hispida]2.6e-12192.62Show/hide
Query:  MNPGGYTVEVTGLSPVATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGAKIVDQRVCITRWGHFDDEFGFWSRPPGHQEEDST
        MNPGGYTVEVTGLSP ATEKDVLDFFAFSGAI+LVEI+RSG+DACTAYVTFKDAYSQETACLLSGAKI+DQRVCITRWG+FDDEFGFWSR  GH EEDST
Subjt:  MNPGGYTVEVTGLSPVATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGAKIVDQRVCITRWGHFDDEFGFWSRPPGHQEEDST

Query:  PASAQRSQFISSAGNAVTMAQEVVKTMLAMGYVLGKDTLTKAKAFDESHQVSATAAAKVADLSHRIGLTDMLGAGYEAVKSVDEKYHVLETTKSAISATG
        PASAQRSQFISSAGNAVTMAQEVVKTMLAMGYVLGKDTLTKAKA DESHQVS TAAAKVADLSHRIGLTDM+GAG+EAVK++DEKYHVL+TTKSAISATG
Subjt:  PASAQRSQFISSAGNAVTMAQEVVKTMLAMGYVLGKDTLTKAKAFDESHQVSATAAAKVADLSHRIGLTDMLGAGYEAVKSVDEKYHVLETTKSAISATG

Query:  RTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLEH
        +TAAAAADTVVRSSYFSRGALFMSDALNRAAK AADLGSRGLEH
Subjt:  RTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLEH

TrEMBL top hitse value%identityAlignment
A0A0A0KSM6 RRM domain-containing protein4.2e-130100Show/hide
Query:  MNPGGYTVEVTGLSPVATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGAKIVDQRVCITRWGHFDDEFGFWSRPPGHQEEDST
        MNPGGYTVEVTGLSPVATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGAKIVDQRVCITRWGHFDDEFGFWSRPPGHQEEDST
Subjt:  MNPGGYTVEVTGLSPVATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGAKIVDQRVCITRWGHFDDEFGFWSRPPGHQEEDST

Query:  PASAQRSQFISSAGNAVTMAQEVVKTMLAMGYVLGKDTLTKAKAFDESHQVSATAAAKVADLSHRIGLTDMLGAGYEAVKSVDEKYHVLETTKSAISATG
        PASAQRSQFISSAGNAVTMAQEVVKTMLAMGYVLGKDTLTKAKAFDESHQVSATAAAKVADLSHRIGLTDMLGAGYEAVKSVDEKYHVLETTKSAISATG
Subjt:  PASAQRSQFISSAGNAVTMAQEVVKTMLAMGYVLGKDTLTKAKAFDESHQVSATAAAKVADLSHRIGLTDMLGAGYEAVKSVDEKYHVLETTKSAISATG

Query:  RTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLEH
        RTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLEH
Subjt:  RTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLEH

A0A1S3BET5 binding partner of ACD11 18.9e-12897.95Show/hide
Query:  MNPGGYTVEVTGLSPVATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGAKIVDQRVCITRWGHFDDEFGFWSRPPGHQEEDST
        MNPGGYTVEVTGLSP+ATEKDVLDFFAFSGAIELVEIVRSG+DACTAYVTFKDAYSQETACLLSGAKIVDQRVCITRWGHFDDEFGFWSRPPGHQEEDST
Subjt:  MNPGGYTVEVTGLSPVATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGAKIVDQRVCITRWGHFDDEFGFWSRPPGHQEEDST

Query:  PASAQRSQFISSAGNAVTMAQEVVKTMLAMGYVLGKDTLTKAKAFDESHQVSATAAAKVADLSHRIGLTDMLGAGYEAVKSVDEKYHVLETTKSAISATG
         ASAQRSQFISSAGNAVTMAQEVVKTMLAMGYVLGKDT TKAKAFDESHQVSATAAAKVADLSHRIGLTDMLGAG+EAVKSVDEKYHVLETTKSAISATG
Subjt:  PASAQRSQFISSAGNAVTMAQEVVKTMLAMGYVLGKDTLTKAKAFDESHQVSATAAAKVADLSHRIGLTDMLGAGYEAVKSVDEKYHVLETTKSAISATG

Query:  RTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLEH
        RTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLEH
Subjt:  RTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLEH

A0A5D3CVI0 Binding partner of ACD11 18.9e-12897.95Show/hide
Query:  MNPGGYTVEVTGLSPVATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGAKIVDQRVCITRWGHFDDEFGFWSRPPGHQEEDST
        MNPGGYTVEVTGLSP+ATEKDVLDFFAFSGAIELVEIVRSG+DACTAYVTFKDAYSQETACLLSGAKIVDQRVCITRWGHFDDEFGFWSRPPGHQEEDST
Subjt:  MNPGGYTVEVTGLSPVATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGAKIVDQRVCITRWGHFDDEFGFWSRPPGHQEEDST

Query:  PASAQRSQFISSAGNAVTMAQEVVKTMLAMGYVLGKDTLTKAKAFDESHQVSATAAAKVADLSHRIGLTDMLGAGYEAVKSVDEKYHVLETTKSAISATG
         ASAQRSQFISSAGNAVTMAQEVVKTMLAMGYVLGKDT TKAKAFDESHQVSATAAAKVADLSHRIGLTDMLGAG+EAVKSVDEKYHVLETTKSAISATG
Subjt:  PASAQRSQFISSAGNAVTMAQEVVKTMLAMGYVLGKDTLTKAKAFDESHQVSATAAAKVADLSHRIGLTDMLGAGYEAVKSVDEKYHVLETTKSAISATG

Query:  RTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLEH
        RTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLEH
Subjt:  RTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLEH

A0A6J1G2B1 binding partner of ACD11 1-like1.3e-11890.57Show/hide
Query:  MNPGGYTVEVTGLSPVATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGAKIVDQRVCITRWGHFDDEFGFWSRPPGHQEEDST
        MNPGGYTVEVTGLSP ATEKD+LDFFAFSGAIELVEIVRSGEDACTAYV+FKDAYSQETACLLSGA IVDQRVCITRWGHFD+EF FWSRP G+ EED T
Subjt:  MNPGGYTVEVTGLSPVATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGAKIVDQRVCITRWGHFDDEFGFWSRPPGHQEEDST

Query:  PASAQRSQFISSAGNAVTMAQEVVKTMLAMGYVLGKDTLTKAKAFDESHQVSATAAAKVADLSHRIGLTDMLGAGYEAVKSVDEKYHVLETTKSAISATG
        P SAQRSQF+S+AG AV+MAQ+VVKTMLAMGYVLGKDT TKAKAFDESHQVSATAAAKVADLS+RIGLTDM+GAGYEA K++DEKYHVL+TTKSAISATG
Subjt:  PASAQRSQFISSAGNAVTMAQEVVKTMLAMGYVLGKDTLTKAKAFDESHQVSATAAAKVADLSHRIGLTDMLGAGYEAVKSVDEKYHVLETTKSAISATG

Query:  RTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLEH
        RTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLEH
Subjt:  RTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLEH

A0A6J1HUH9 binding partner of ACD11 1-like isoform X18.3e-11890.16Show/hide
Query:  MNPGGYTVEVTGLSPVATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGAKIVDQRVCITRWGHFDDEFGFWSRPPGHQEEDST
        MNPGGYTVEVTGLSP ATEKD+LDFFAFSGAIELVEIVRSGEDACTAYV+FKDAYSQETACLLSGA IVDQRVCITRWGHFD+EF FWSRP G+ EED T
Subjt:  MNPGGYTVEVTGLSPVATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGAKIVDQRVCITRWGHFDDEFGFWSRPPGHQEEDST

Query:  PASAQRSQFISSAGNAVTMAQEVVKTMLAMGYVLGKDTLTKAKAFDESHQVSATAAAKVADLSHRIGLTDMLGAGYEAVKSVDEKYHVLETTKSAISATG
        PASAQRSQF S+ G AV+MAQ+VVKTMLAMGYVLGKDT TKAKAFDESHQVSATAAAKVADLS+RIGLTDM+GAGYEA K++DEKYHVL+TTKSAISATG
Subjt:  PASAQRSQFISSAGNAVTMAQEVVKTMLAMGYVLGKDTLTKAKAFDESHQVSATAAAKVADLSHRIGLTDMLGAGYEAVKSVDEKYHVLETTKSAISATG

Query:  RTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLEH
        RTAAAAADTVVRSSYFSRGALF+SDALNRAAKAAADLGSRGLEH
Subjt:  RTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLEH

SwissProt top hitse value%identityAlignment
P87216 Protein vip14.0e-0828.57Show/hide
Query:  VEVTGLSPVATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGAKIVDQRVCITRWGHFDDEFGFWSRPPGHQEEDSTPASAQRS
        V VT +SP  TEK + DFF+F G +  +   +SGE   TA + F+   + +TA LL  A +   ++ IT                    ED   AS    
Subjt:  VEVTGLSPVATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGAKIVDQRVCITRWGHFDDEFGFWSRPPGHQEEDSTPASAQRS

Query:  QFISSAGNAVTMAQE------VVKTMLAMGYVLGKDTLTKAKAFDESHQVSATAAAKVADLSHRIGLTDMLGAGYEAVKSVDEKYHVLE
             AG      QE      ++  +L+ GY L   TL K+   D+S+ VS+                 +L +    V+SV+E+YHV E
Subjt:  QFISSAGNAVTMAQE------VVKTMLAMGYVLGKDTLTKAKAFDESHQVSATAAAKVADLSHRIGLTDMLGAGYEAVKSVDEKYHVLE

Q9LFD5 Binding partner of ACD11 11.4e-3439.83Show/hide
Query:  TVEVTGLSPVATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGAKIVDQRVCITRWGHFDDEFGFWSRPPGHQEEDSTPASAQR
        +V+V  LS  ATE D+ +FF+FSG +E ++I +S E   +AYVTFK+    ETA LLSGA I DQ V I    ++                 S PA+   
Subjt:  TVEVTGLSPVATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGAKIVDQRVCITRWGHFDDEFGFWSRPPGHQEEDSTPASAQR

Query:  SQFISSAGNAVTMAQEVVKTMLAMGYVLGKDTLTKAKAFDESHQVSATAAAKVADLSHRIGLTDMLGAG----YEAVKSVDEKYHVLETTKSAISATGRT
            S A + V  A++VV +MLA G++LGKD + KAKAFDE H  ++TA A VA L  +IGL+  L AG     E +K+VD+ + V E TKS  +A  +T
Subjt:  SQFISSAGNAVTMAQEVVKTMLAMGYVLGKDTLTKAKAFDESHQVSATAAAKVADLSHRIGLTDMLGAG----YEAVKSVDEKYHVLETTKSAISATGRT

Query:  AAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLE
         ++A   V+++ Y   G  + + A NR A+AA ++G +  E
Subjt:  AAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLE

Arabidopsis top hitse value%identityAlignment
AT1G14340.1 RNA-binding (RRM/RBD/RNP motifs) family protein7.5e-7965.13Show/hide
Query:  GYTVEVTGLSPVATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGAKIVDQRVCITRWGHFDDEFGFWSRPP-GHQEEDSTPAS
        GY VEVTGLSP  T  D++DFF+FSG I+ ++IVRSGE ACTAYV FKD+YSQETA LL+GA I+DQRVCITRWG   +EF FW+    G ++E  +   
Subjt:  GYTVEVTGLSPVATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGAKIVDQRVCITRWGHFDDEFGFWSRPP-GHQEEDSTPAS

Query:  AQRSQFISSAGNAVTMAQEVVKTMLAMGYVLGKDTLTKAKAFDESHQVSATAAAKVADLSHRIGLTDMLGAGYEAVKSVDEKYHVLETTKSAISATGRTA
        AQRS+F  +AG AVT AQEVVK MLA G+VLGKD L+KAKAFDESH VSA A A+V+ L  RIGLTD +  G EAV+  D++YHV +T KSA+ ATGRTA
Subjt:  AQRSQFISSAGNAVTMAQEVVKTMLAMGYVLGKDTLTKAKAFDESHQVSATAAAKVADLSHRIGLTDMLGAGYEAVKSVDEKYHVLETTKSAISATGRTA

Query:  AAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRG
        AAAA +VV SSYFS GAL++S AL RAAKAA+DLG+RG
Subjt:  AAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRG

AT3G01210.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.5e-5550.79Show/hide
Query:  MNPGGYTVEVTGLSPVATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGAKIVDQRVCITRWGHFDDEFGFWSRPPGHQEEDST
        M P GY  +VT LSP ATEKDV  FF+  G +ELVEI     DA TAYVTF+DAY+ + A LLSGA IVDQ V I+ +G +  E          QEED +
Subjt:  MNPGGYTVEVTGLSPVATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGAKIVDQRVCITRWGHFDDEFGFWSRPPGHQEEDST

Query:  PASAQRSQFISSAGNAVTMAQEVVKTMLAMGYVLGKDTLTKAKAFDESHQVSATAAAKVADLSHRIGLTDMLGAGYEAVKSVDEKYHVLETTKSAI----
            +   F SS G A+T+AQ+VV+TMLA GYVL KD + KAKA DES + S+  A K+A++SH +GLT  + +  E V+S DEKYH  + TKSA+    
Subjt:  PASAQRSQFISSAGNAVTMAQEVVKTMLAMGYVLGKDTLTKAKAFDESHQVSATAAAKVADLSHRIGLTDMLGAGYEAVKSVDEKYHVLETTKSAI----

Query:  -------SATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRG
               + TG+ AAAAA +VV S YF+ GAL+ SDAL RAAKAAA +G  G
Subjt:  -------SATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRG

AT4G17720.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.1e-3740.57Show/hide
Query:  TVEVTGLSPVATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGAKIVDQRVCITRWGHFDDEFGFWSRPPGHQEEDSTPASAQR
        TV+V+ +S  AT++D+ +FF+FSG I  +E     E    AYVTFKD    ETA LLSGA IVD  V +             S  P +Q      AS + 
Subjt:  TVEVTGLSPVATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGAKIVDQRVCITRWGHFDDEFGFWSRPPGHQEEDSTPASAQR

Query:  SQFISS--AGNAV-TMAQEVVKTMLAMGYVLGKDTLTKAKAFDESHQVSATAAAKVADLSHRIGLTDMLGAGY----EAVKSVDEKYHVLETTKSAISAT
             S  AG++V   A++VV +MLA G++LGKD + KAK+ DE HQ+++TA+AKVA    +IG TD +  G     E V+ VD+KY V E TKSAI+A 
Subjt:  SQFISS--AGNAV-TMAQEVVKTMLAMGYVLGKDTLTKAKAFDESHQVSATAAAKVADLSHRIGLTDMLGAGY----EAVKSVDEKYHVLETTKSAISAT

Query:  GRTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLE
         +T + A   ++++ Y   GA +++ A N+ AKAA ++G +  E
Subjt:  GRTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLE

AT5G16840.1 binding partner of acd11 11.0e-3539.83Show/hide
Query:  TVEVTGLSPVATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGAKIVDQRVCITRWGHFDDEFGFWSRPPGHQEEDSTPASAQR
        +V+V  LS  ATE D+ +FF+FSG +E ++I +S E   +AYVTFK+    ETA LLSGA I DQ V I    ++                 S PA+   
Subjt:  TVEVTGLSPVATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGAKIVDQRVCITRWGHFDDEFGFWSRPPGHQEEDSTPASAQR

Query:  SQFISSAGNAVTMAQEVVKTMLAMGYVLGKDTLTKAKAFDESHQVSATAAAKVADLSHRIGLTDMLGAG----YEAVKSVDEKYHVLETTKSAISATGRT
            S A + V  A++VV +MLA G++LGKD + KAKAFDE H  ++TA A VA L  +IGL+  L AG     E +K+VD+ + V E TKS  +A  +T
Subjt:  SQFISSAGNAVTMAQEVVKTMLAMGYVLGKDTLTKAKAFDESHQVSATAAAKVADLSHRIGLTDMLGAG----YEAVKSVDEKYHVLETTKSAISATGRT

Query:  AAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLE
         ++A   V+++ Y   G  + + A NR A+AA ++G +  E
Subjt:  AAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLE

AT5G16840.2 binding partner of acd11 11.2e-3639.83Show/hide
Query:  TVEVTGLSPVATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGAKIVDQRVCITRWGHFDDEFGFWSRPPGHQEEDSTPASAQR
        +V+V  LS  ATE D+ +FF+FSG +E ++I  S E   +AYVTFK+    ETA LLSGA I DQ V I    ++                 S PA+   
Subjt:  TVEVTGLSPVATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGAKIVDQRVCITRWGHFDDEFGFWSRPPGHQEEDSTPASAQR

Query:  SQFISSAGNAVTMAQEVVKTMLAMGYVLGKDTLTKAKAFDESHQVSATAAAKVADLSHRIGLTDMLGAG----YEAVKSVDEKYHVLETTKSAISATGRT
            S A + V  A++VV +MLA G++LGKD + KAKAFDE H  ++TA A VA L  +IGL+  L AG     E +K+VD+ + V E TKS  +A  +T
Subjt:  SQFISSAGNAVTMAQEVVKTMLAMGYVLGKDTLTKAKAFDESHQVSATAAAKVADLSHRIGLTDMLGAG----YEAVKSVDEKYHVLETTKSAISATGRT

Query:  AAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLE
         ++A   V+++ Y   G  + + A NR A+AA ++G +  E
Subjt:  AAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGGCCCAGTTAGTTTCACTGTGGTCTATTCAGCTCGGCGGCAGAGTCTTTGGCGCCTCCTTTCTTCGAGAGTTTTCTCAAGCTTGTCTTCAGAAATTTATCTCTGG
GAGTCAATTCCTCTGTCTTCCTCCGCAAGTATCATATTTCTACAAACGAATTGGTGAATTAAGTTACTGTTGCTGCAAAAATATGAATCCCGGTGGTTATACGGTTGAAG
TGACGGGCTTGTCTCCTGTAGCAACAGAGAAAGATGTCCTCGATTTCTTCGCTTTCTCTGGCGCAATCGAGCTCGTTGAGATTGTTAGATCTGGTGAAGATGCCTGCACT
GCTTATGTAACATTCAAAGATGCTTATTCTCAAGAGACTGCTTGCTTGCTGAGTGGTGCAAAAATTGTAGATCAAAGAGTTTGTATAACACGGTGGGGACATTTTGATGA
TGAATTTGGTTTTTGGAGTAGGCCTCCTGGTCACCAGGAAGAAGACAGTACTCCTGCTTCGGCACAAAGAAGTCAGTTCATTTCCAGTGCTGGTAACGCAGTAACCATGG
CCCAGGAAGTAGTCAAAACCATGCTGGCCATGGGTTACGTGCTGGGTAAAGACACATTGACAAAAGCTAAAGCCTTCGATGAATCTCATCAGGTTTCAGCAACGGCAGCA
GCTAAGGTAGCAGATTTGAGTCATAGAATTGGCCTTACTGACATGTTAGGTGCGGGTTATGAAGCAGTTAAATCCGTGGATGAGAAGTACCACGTATTGGAGACCACCAA
ATCAGCTATATCAGCCACAGGAAGAACAGCTGCCGCTGCTGCCGATACTGTGGTCAGGAGTAGCTACTTCTCTAGGGGAGCTCTTTTCATGTCTGATGCCCTGAATCGAG
CGGCCAAAGCTGCAGCTGACTTGGGTAGTCGTGGTCTTGAACATTAG
mRNA sequenceShow/hide mRNA sequence
ATGACGGCCCAGTTAGTTTCACTGTGGTCTATTCAGCTCGGCGGCAGAGTCTTTGGCGCCTCCTTTCTTCGAGAGTTTTCTCAAGCTTGTCTTCAGAAATTTATCTCTGG
GAGTCAATTCCTCTGTCTTCCTCCGCAAGTATCATATTTCTACAAACGAATTGGTGAATTAAGTTACTGTTGCTGCAAAAATATGAATCCCGGTGGTTATACGGTTGAAG
TGACGGGCTTGTCTCCTGTAGCAACAGAGAAAGATGTCCTCGATTTCTTCGCTTTCTCTGGCGCAATCGAGCTCGTTGAGATTGTTAGATCTGGTGAAGATGCCTGCACT
GCTTATGTAACATTCAAAGATGCTTATTCTCAAGAGACTGCTTGCTTGCTGAGTGGTGCAAAAATTGTAGATCAAAGAGTTTGTATAACACGGTGGGGACATTTTGATGA
TGAATTTGGTTTTTGGAGTAGGCCTCCTGGTCACCAGGAAGAAGACAGTACTCCTGCTTCGGCACAAAGAAGTCAGTTCATTTCCAGTGCTGGTAACGCAGTAACCATGG
CCCAGGAAGTAGTCAAAACCATGCTGGCCATGGGTTACGTGCTGGGTAAAGACACATTGACAAAAGCTAAAGCCTTCGATGAATCTCATCAGGTTTCAGCAACGGCAGCA
GCTAAGGTAGCAGATTTGAGTCATAGAATTGGCCTTACTGACATGTTAGGTGCGGGTTATGAAGCAGTTAAATCCGTGGATGAGAAGTACCACGTATTGGAGACCACCAA
ATCAGCTATATCAGCCACAGGAAGAACAGCTGCCGCTGCTGCCGATACTGTGGTCAGGAGTAGCTACTTCTCTAGGGGAGCTCTTTTCATGTCTGATGCCCTGAATCGAG
CGGCCAAAGCTGCAGCTGACTTGGGTAGTCGTGGTCTTGAACATTAGTGTGAGAGAGTGCTTCTATCTCATCCATTGTAAATAAAGAAATTTAGATGCATACCTTTAAAT
TTGCAAGTATTACGATATTTTATTAGATGGTACATTAATCTAAATGCTGTATGTATAAGTTTAAACCTTTAAATTTCATAGAGTTCAATTACACGTACTGGTTATTTGAC
CCCACAAGTTCGCTAAATTTTAACCTCAAATTCTGTAAAATTGGATCTGAGATGGTCTTTATTGGGTCGTTTGTCAGTTTGTAAATTCAGTACCCTTGGAGTCAAATCTA
TTCTTTTAGCACTCTTGGAAACGTCTCCCAATATGTACTTTTTACAATCCTTCCGTTTACAGATTGTCTTTTCCTT
Protein sequenceShow/hide protein sequence
MTAQLVSLWSIQLGGRVFGASFLREFSQACLQKFISGSQFLCLPPQVSYFYKRIGELSYCCCKNMNPGGYTVEVTGLSPVATEKDVLDFFAFSGAIELVEIVRSGEDACT
AYVTFKDAYSQETACLLSGAKIVDQRVCITRWGHFDDEFGFWSRPPGHQEEDSTPASAQRSQFISSAGNAVTMAQEVVKTMLAMGYVLGKDTLTKAKAFDESHQVSATAA
AKVADLSHRIGLTDMLGAGYEAVKSVDEKYHVLETTKSAISATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRGLEH