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CSPI05G23820 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G23820
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr5:23729333..23730571
RNA-Seq ExpressionCSPI05G23820
SyntenyCSPI05G23820
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034426.1 putative lipoprotein yfhM [Cucumis melo var. makuwa]1.6e-1391.67Show/hide
Query:  MADQTQHLVMSFFLVSLLIIFFNTVSASRATVMIHLGQDFPASQAANQ
        MADQTQHLVMSF L+SLLIIFFNTVSASRAT M+HLGQDFPASQAANQ
Subjt:  MADQTQHLVMSFFLVSLLIIFFNTVSASRATVMIHLGQDFPASQAANQ
KGN51928.1 hypothetical protein Csa_009059 [Cucumis sativus]8.4e-1597.92Show/hide
Query:  MADQTQHLVMSFFLVSLLIIFFNTVSASRATVMIHLGQDFPASQAANQ
        MADQTQHLVMSFFLVSLLIIFFNTVSASRATVMIHLGQDFPASQA NQ
Subjt:  MADQTQHLVMSFFLVSLLIIFFNTVSASRATVMIHLGQDFPASQAANQ
XP_008446367.1 PREDICTED: uncharacterized protein LOC103489129 [Cucumis melo]1.4e-1492Show/hide
Query:  MKMADQTQHLVMSFFLVSLLIIFFNTVSASRATVMIHLGQDFPASQAANQ
        MKMADQTQHLVMSF L+SLLIIFFNTVSASRAT M+HLGQDFPASQAANQ
Subjt:  MKMADQTQHLVMSFFLVSLLIIFFNTVSASRATVMIHLGQDFPASQAANQ
TrEMBL top hitse value%identityAlignment
A0A0A0KQN6 Uncharacterized protein4.1e-1597.92Show/hide
Query:  MADQTQHLVMSFFLVSLLIIFFNTVSASRATVMIHLGQDFPASQAANQ
        MADQTQHLVMSFFLVSLLIIFFNTVSASRATVMIHLGQDFPASQA NQ
Subjt:  MADQTQHLVMSFFLVSLLIIFFNTVSASRATVMIHLGQDFPASQAANQ
A0A1S3BEE6 uncharacterized protein LOC1034891296.9e-1592Show/hide
Query:  MKMADQTQHLVMSFFLVSLLIIFFNTVSASRATVMIHLGQDFPASQAANQ
        MKMADQTQHLVMSF L+SLLIIFFNTVSASRAT M+HLGQDFPASQAANQ
Subjt:  MKMADQTQHLVMSFFLVSLLIIFFNTVSASRATVMIHLGQDFPASQAANQ
A0A5A7SX31 Putative lipoprotein yfhM7.7e-1491.67Show/hide
Query:  MADQTQHLVMSFFLVSLLIIFFNTVSASRATVMIHLGQDFPASQAANQ
        MADQTQHLVMSF L+SLLIIFFNTVSASRAT M+HLGQDFPASQAANQ
Subjt:  MADQTQHLVMSFFLVSLLIIFFNTVSASRATVMIHLGQDFPASQAANQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAATGGCAGACCAAACCCAACACTTGGTTATGAGTTTTTTCCTTGTCTCTTTACTGATCATCTTCTTCAATACTGTCTCTGCATCAAGGGCAACAGTCATGATCCA
TCTTGGTCAAGACTTTCCAGCTTCCCAAGCTGCAAACCAGGTATATATAAATATATATGTACACTCAATTTATAGAAATGATTTAGGCCTGATCGATTTCTTCAATGGCA
GAAGAATCAGCCACTGGAGAATTTGTGGAATGGCAGAATGGATTTGCAGTTCAATGACTATCAAATATTTGGAGCTAATCCTCGACATACTCCAAAGCCAACAGGGAAAG
TCTGATAGAATAAATGTTCATCAAAATGGCTTATCAATGTGA
mRNA sequenceShow/hide mRNA sequence
AGTCTCCCCCATATGCAAATATTTGATAATAGAAGTGAAACAAGAATAATATTTCATACAAGTGTCCAAAGTTTAAGAAGAGTTTATGAGTTTGTTTTGGCCGACAAGAT
GGGATGACAAATTGTAGTCAGTGCTTATATTCGACTGTAAAATTCTCGTTCACAATCCATTACAAGGTTGACCAAAATGGTTTTTCAAATTTGTTCATCATCATTTTTCA
GATTTTCCTTCTTCTTCCCACTCAGAATTTCTCACCCATTTCTTGTTTTGTTTTCTATCGTCTCTTTCTCTTCATTCTTAAAATTTGTCAGTAGAATTGACTTCTTTCTC
ATTCTCCACTAATTAGCTTCCATGGTGGATCAAACTCCATTACTTTTCTTGATTCACTTCTCTTCCCGTATTCCTTTTCAGTCTTCAATCCTTTAGAAACTGGCCTTTAA
AAAAGTCATGAAACAAGACAATTTGCTCATCATTTCTGATATTATAACTGCGTTCTAAGAAGTGGGTAAGGTAAGTTTTTTCCTCTTTTGTTAAAAGTCTACTCATTATT
TTATCACTTTCTGTAATCCCCACTCACGTTGTGACTTTGAAATCTAAAGAAAAAAAAGTTTAAAAGTTGGGTAATCTTCCAGAAACGTTTCTATGTGCTTCAATTCACAA
ACCCGTTTACCAGTATATATATGAGAGTTATAAGTGGATGAAGATCAAAACTGTGTAATGAAAATGGCAGACCAAACCCAACACTTGGTTATGAGTTTTTTCCTTGTCTC
TTTACTGATCATCTTCTTCAATACTGTCTCTGCATCAAGGGCAACAGTCATGATCCATCTTGGTCAAGACTTTCCAGCTTCCCAAGCTGCAAACCAGGTATATATAAATA
TATATGTACACTCAATTTATAGAAATGATTTAGGCCTGATCGATTTCTTCAATGGCAGAAGAATCAGCCACTGGAGAATTTGTGGAATGGCAGAATGGATTTGCAGTTCA
ATGACTATCAAATATTTGGAGCTAATCCTCGACATACTCCAAAGCCAACAGGGAAAGTCTGATAGAATAAATGTTCATCAAAATGGCTTATCAATGTGAACTCTTTAACT
TAATCGCAGAAATGTCCAATTGGGCAGTTCTAAGTATAGATATTGGAGAC
Protein sequenceShow/hide protein sequence
MKMADQTQHLVMSFFLVSLLIIFFNTVSASRATVMIHLGQDFPASQAANQVYINIYVHSIYRNDLGLIDFFNGRRISHWRICGMAEWICSSMTIKYLELILDILQSQQGK
SDRINVHQNGLSM