; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI05G24010 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G24010
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionGCK domain-containing protein
Genome locationChr5:23815896..23817070
RNA-Seq ExpressionCSPI05G24010
SyntenyCSPI05G24010
Gene Ontology termsGO:0006414 - translational elongation (biological process)
GO:0003746 - translation elongation factor activity (molecular function)
InterPro domainsIPR012891 - GCK


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008446394.1 PREDICTED: transcription elongation factor spt5-like [Cucumis melo]5.7e-7591.72Show/hide
Query:  MSTSESKLQDAESNAAATKTLEDQPQSDTPNYSEEKSSEEASLSGKISESGGGDEGGEDI----EEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKN
        MSTSESKLQDAESNAAA+KTLEDQPQSD+ ++S+EKSSEEASLSGKISESGGGDEGGEDI    EEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKN
Subjt:  MSTSESKLQDAESNAAATKTLEDQPQSDTPNYSEEKSSEEASLSGKISESGGGDEGGEDI----EEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKN

Query:  KEDIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKETTPSASQQDTNSDEQKASVGGK
        KEDIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKE  PSASQ+DTNSDEQKAS GGK
Subjt:  KEDIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKETTPSASQQDTNSDEQKASVGGK

XP_011655692.1 uncharacterized protein LOC105435574 [Cucumis sativus]3.7e-82100Show/hide
Query:  MSTSESKLQDAESNAAATKTLEDQPQSDTPNYSEEKSSEEASLSGKISESGGGDEGGEDIEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKNKEDI
        MSTSESKLQDAESNAAATKTLEDQPQSDTPNYSEEKSSEEASLSGKISESGGGDEGGEDIEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKNKEDI
Subjt:  MSTSESKLQDAESNAAATKTLEDQPQSDTPNYSEEKSSEEASLSGKISESGGGDEGGEDIEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKNKEDI

Query:  VEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKETTPSASQQDTNSDEQKASVGGK
        VEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKETTPSASQQDTNSDEQKASVGGK
Subjt:  VEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKETTPSASQQDTNSDEQKASVGGK

XP_022997117.1 uncharacterized protein LOC111492108 [Cucurbita maxima]2.7e-6180Show/hide
Query:  MSTSESKLQDAESN--AAATKTLEDQPQSDTPNYSEEKSSEEASLSGKISESGGGDEGGEDIEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKNKE
        MSTSESKLQDAESN  AAA KT EDQ Q   PN+SEEKS +E+  SGKISESGG DEGGED++EEEEGECGFCLFMKGGGCRDSF+ WEKCIEEAEKNKE
Subjt:  MSTSESKLQDAESN--AAATKTLEDQPQSDTPNYSEEKSSEEASLSGKISESGGGDEGGEDIEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKNKE

Query:  DIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKETTPSASQQDTNSDEQKASVG
        DIVEKCFEVTGALKKCMEAH DYYEPILKAEKMAE EAIIELEKE+TP+A+QQ T+S + +   G
Subjt:  DIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKETTPSASQQDTNSDEQKASVG

XP_023536143.1 uncharacterized protein LOC111797387 [Cucurbita pepo subsp. pepo]9.4e-6281.1Show/hide
Query:  MSTSESKLQDAESN-AAATKTLEDQPQSDTPNYSEEKSSEEASLSGKISESGGGDEGGEDIEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKNKED
        MSTSESKLQDAESN AAATKT EDQ Q   PN+SEEKS EE+  SGKIS SGG DEGGED++EEEEGECGFCLFMKGGGCRDSF+ WEKCIEEAEKNKED
Subjt:  MSTSESKLQDAESN-AAATKTLEDQPQSDTPNYSEEKSSEEASLSGKISESGGGDEGGEDIEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKNKED

Query:  IVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKETTPSASQQDTNSDEQKASVG
        IVEKCFEVTGALKKCMEAH DYYEPILKAEKMAE EAIIELEKE+TP+A+QQ T+S + +   G
Subjt:  IVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKETTPSASQQDTNSDEQKASVG

XP_038893081.1 uncharacterized protein LOC120081968 [Benincasa hispida]3.7e-6680.23Show/hide
Query:  MSTSESKLQDAESNAAATKTLEDQPQSDTPNYSEEKSSEEASLSGKISESGGGDEGGEDIEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKNKEDI
        MSTSESKLQDAES AAATKTLEDQPQS + N SEEK SEE++ SG+I ESGGGDE GED+EEEEEGECGFCLFMKGGGC+DSFI WEKCIEEAEKNKEDI
Subjt:  MSTSESKLQDAESNAAATKTLEDQPQSDTPNYSEEKSSEEASLSGKISESGGGDEGGEDIEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKNKEDI

Query:  VEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKETTPSASQQDTNS------------DEQKASVGGK
        VEKCFEVTGALKKCMEAH DYYEPILKAEKMAEEEAIIELEKE TP+A+QQ++NS            +EQKAS GGK
Subjt:  VEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKETTPSASQQDTNS------------DEQKASVGGK

TrEMBL top hitse value%identityAlignment
A0A0A0KU46 GCK domain-containing protein1.8e-82100Show/hide
Query:  MSTSESKLQDAESNAAATKTLEDQPQSDTPNYSEEKSSEEASLSGKISESGGGDEGGEDIEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKNKEDI
        MSTSESKLQDAESNAAATKTLEDQPQSDTPNYSEEKSSEEASLSGKISESGGGDEGGEDIEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKNKEDI
Subjt:  MSTSESKLQDAESNAAATKTLEDQPQSDTPNYSEEKSSEEASLSGKISESGGGDEGGEDIEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKNKEDI

Query:  VEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKETTPSASQQDTNSDEQKASVGGK
        VEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKETTPSASQQDTNSDEQKASVGGK
Subjt:  VEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKETTPSASQQDTNSDEQKASVGGK

A0A1S3BFM8 transcription elongation factor spt5-like2.7e-7591.72Show/hide
Query:  MSTSESKLQDAESNAAATKTLEDQPQSDTPNYSEEKSSEEASLSGKISESGGGDEGGEDI----EEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKN
        MSTSESKLQDAESNAAA+KTLEDQPQSD+ ++S+EKSSEEASLSGKISESGGGDEGGEDI    EEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKN
Subjt:  MSTSESKLQDAESNAAATKTLEDQPQSDTPNYSEEKSSEEASLSGKISESGGGDEGGEDI----EEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKN

Query:  KEDIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKETTPSASQQDTNSDEQKASVGGK
        KEDIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKE  PSASQ+DTNSDEQKAS GGK
Subjt:  KEDIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKETTPSASQQDTNSDEQKASVGGK

A0A5A7SVC8 Transcription elongation factor spt5-like2.7e-7591.72Show/hide
Query:  MSTSESKLQDAESNAAATKTLEDQPQSDTPNYSEEKSSEEASLSGKISESGGGDEGGEDI----EEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKN
        MSTSESKLQDAESNAAA+KTLEDQPQSD+ ++S+EKSSEEASLSGKISESGGGDEGGEDI    EEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKN
Subjt:  MSTSESKLQDAESNAAATKTLEDQPQSDTPNYSEEKSSEEASLSGKISESGGGDEGGEDI----EEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKN

Query:  KEDIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKETTPSASQQDTNSDEQKASVGGK
        KEDIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKE  PSASQ+DTNSDEQKAS GGK
Subjt:  KEDIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKETTPSASQQDTNSDEQKASVGGK

A0A6J1GZI9 transcription elongation factor spt54.7e-5982.35Show/hide
Query:  MSTSESKLQDAESN----AAATKTLEDQPQSDTPNYSEEKSSEEASLSGKISESGGGDEGGEDIEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKN
        MSTSESKLQDAESN    AAA KT EDQ Q   PN+SEEKS EE+  SGKISESGG DEGGED++EEEE ECGFCLFMKGGGCRDSF+ WEKCIEEAEKN
Subjt:  MSTSESKLQDAESN----AAATKTLEDQPQSDTPNYSEEKSSEEASLSGKISESGGGDEGGEDIEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKN

Query:  KEDIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKETTPSAS
        KEDIVEKCFE+TGALKKCMEAH DYYEPILKAEKMAE EAIIELEKE+TP+A+
Subjt:  KEDIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKETTPSAS

A0A6J1K434 uncharacterized protein LOC1114921081.3e-6180Show/hide
Query:  MSTSESKLQDAESN--AAATKTLEDQPQSDTPNYSEEKSSEEASLSGKISESGGGDEGGEDIEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKNKE
        MSTSESKLQDAESN  AAA KT EDQ Q   PN+SEEKS +E+  SGKISESGG DEGGED++EEEEGECGFCLFMKGGGCRDSF+ WEKCIEEAEKNKE
Subjt:  MSTSESKLQDAESN--AAATKTLEDQPQSDTPNYSEEKSSEEASLSGKISESGGGDEGGEDIEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKNKE

Query:  DIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKETTPSASQQDTNSDEQKASVG
        DIVEKCFEVTGALKKCMEAH DYYEPILKAEKMAE EAIIELEKE+TP+A+QQ T+S + +   G
Subjt:  DIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKETTPSASQQDTNSDEQKASVG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G14048.1 GCK domain-containing protein4.1e-0740.24Show/hide
Query:  EEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKNKEDIVEKCFEVTGALKKCME-AHPDYYEPILKAEKMAEEEAIIELE
        EEEE+GE  F  FM+GGGC++ F  WE C +EA             V   + KCM     D+Y P L A+K A+E    EL+
Subjt:  EEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKNKEDIVEKCFEVTGALKKCME-AHPDYYEPILKAEKMAEEEAIIELE

AT1G14060.1 GCK domain-containing protein2.7e-3048.8Show/hide
Query:  SESKLQDAESNAAATKTLEDQPQSDTPNYSEE--------KSSEEASLSGKISESGGGDEGGEDIEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEK
        S+ K Q+ E    A           TP  SEE        +  E++    K  E GGGD  G     EEEGECGFCLFMKGGGC+DSF+AWE+C+E AEK
Subjt:  SESKLQDAESNAAATKTLEDQPQSDTPNYSEE--------KSSEEASLSGKISESGGGDEGGEDIEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEK

Query:  NKEDIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKETTPSASQQDTNSDEQKAS
        NKEDIV  C EVT  LKKCM+ H DYY+PIL AEK AE E   ELE E      +++  S+E+ A+
Subjt:  NKEDIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKETTPSASQQDTNSDEQKAS

AT5G02210.1 GCK domain-containing protein3.8e-1343.86Show/hide
Query:  EEKSSEEASLSGKISESGGGDEGGEDIEEEEEGECGFCLFMKGGGCRDSFIAW-EKC---IEEAEKNKEDIVEKCFEVTGALKKCMEAHPDYYEPILKAE
        +++S+EE+ +   +S +       ++I EEE+ +  F  FMKGGGC++SF AW + C    EEAEKNK D+V KC  + G   KCM+ H DYY PIL  +
Subjt:  EEKSSEEASLSGKISESGGGDEGGEDIEEEEEGECGFCLFMKGGGCRDSFIAW-EKC---IEEAEKNKEDIVEKCFEVTGALKKCMEAHPDYYEPILKAE

Query:  KMAEEEAIIELEKE
        K  EE     LEKE
Subjt:  KMAEEEAIIELEKE

AT5G57570.1 GCK domain-containing protein2.7e-1441.07Show/hide
Query:  EDQPQSDTPNYSEEKSSEEASLSGKISESGGGDEGGEDIEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKN-KEDIVEKCFEVTGALKKCMEAHPD
        ++ P ++   +S ++  E  +L   ++E+G G       EEEE GEC  C F+KGG C++SFIA E+C++EAE++ +E    KC EV    K CM  +P 
Subjt:  EDQPQSDTPNYSEEKSSEEASLSGKISESGGGDEGGEDIEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKN-KEDIVEKCFEVTGALKKCMEAHPD

Query:  YYEPILKAEKMA
        YYEPIL  E  A
Subjt:  YYEPILKAEKMA

AT5G57640.1 GCK domain-containing protein1.0e-1339.53Show/hide
Query:  DTPNYSEEKSSEEASLSGKISESGGGDEGGE----------DIEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKNKEDIVEKCFEVTGALKKCMEA
        D  +  E K+  E  +  K S++   D+G E          D  EEE GEC  C F+KGG C+++F   E C +EA+KN ED V KC E     K CM  
Subjt:  DTPNYSEEKSSEEASLSGKISESGGGDEGGE----------DIEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKNKEDIVEKCFEVTGALKKCMEA

Query:  HPDYYEPILKAEKMAEEEAIIEL---EKE
        +P YYEP+L  E  A  + + EL   EKE
Subjt:  HPDYYEPILKAEKMAEEEAIIEL---EKE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTACTTCGGAGTCCAAACTCCAAGACGCAGAATCTAACGCCGCCGCCACTAAGACCCTGGAAGATCAACCACAATCGGATACCCCAAATTACTCTGAGGAAAAATC
TTCCGAGGAAGCAAGTCTGTCAGGAAAGATTTCCGAGAGTGGAGGTGGAGATGAAGGAGGAGAAGATATAGAAGAGGAAGAGGAGGGGGAATGTGGGTTTTGCTTGTTTA
TGAAAGGCGGTGGATGCAGAGATAGCTTCATTGCGTGGGAGAAGTGTATCGAGGAGGCGGAGAAGAACAAGGAGGATATTGTGGAGAAATGCTTTGAAGTGACTGGAGCA
TTGAAGAAATGTATGGAAGCTCATCCAGATTATTACGAACCGATTCTGAAGGCGGAGAAAATGGCTGAGGAGGAAGCGATTATAGAATTGGAGAAGGAAACAACTCCAAG
TGCTTCCCAGCAAGATACGAATTCTGATGAACAGAAGGCCTCTGTTGGAGGTAAGTGA
mRNA sequenceShow/hide mRNA sequence
TAAGTTCATACATCTTTAGTAGAGTGAAAAAAAATGATAGCTTTTCGTATTTTTATAACAAAAATTATAGTCAAGCCTCATGCTTTGACCATTTTAGCTTCAACAACAAG
GAAGAGAAAGGAAAGGAAACCTCTTGTTGAGCTTTGATTCATTCCTGAGGGTTTTTGGGGGTTTAAGCCGCCGGCGGTGGGACGACGAACCATTCCGCCACAGGCTACCT
AACCACATCGACACTGCCATCTTCGAATCCGATTGCTCCTCCTGCACCGACTAGGATGTCTACTTCGGAGTCCAAACTCCAAGACGCAGAATCTAACGCCGCCGCCACTA
AGACCCTGGAAGATCAACCACAATCGGATACCCCAAATTACTCTGAGGAAAAATCTTCCGAGGAAGCAAGTCTGTCAGGAAAGATTTCCGAGAGTGGAGGTGGAGATGAA
GGAGGAGAAGATATAGAAGAGGAAGAGGAGGGGGAATGTGGGTTTTGCTTGTTTATGAAAGGCGGTGGATGCAGAGATAGCTTCATTGCGTGGGAGAAGTGTATCGAGGA
GGCGGAGAAGAACAAGGAGGATATTGTGGAGAAATGCTTTGAAGTGACTGGAGCATTGAAGAAATGTATGGAAGCTCATCCAGATTATTACGAACCGATTCTGAAGGCGG
AGAAAATGGCTGAGGAGGAAGCGATTATAGAATTGGAGAAGGAAACAACTCCAAGTGCTTCCCAGCAAGATACGAATTCTGATGAACAGAAGGCCTCTGTTGGAGGTAAG
TGAAGTTGGTTGCTGCTCGTTAGATCTGATTCTTGAAGCGGATAAACATCATTTTGTTGAGAGTTCTTTAGTTTCTAGTCGATCTTTTAACAGGCTGTGGAAGATATCTT
CCTTAAACTCTTTGTCTTAGTGCACCTAAAGCTGATTTCTTTATCTGAAAGTATCATAGGAAAGAAGAGATCTTACCTTACATCACTTCTGATTTAATTCAAATTTCTGA
ATAATTGTTCATGCCATTGTTGTTTAGTATCAATTTTCACAATCATATTCCCTAATGTGTCTATGTCATCTCGATTAAAGCTCCATCTGAATTCCCCCTTTCTGCTATCG
TTGGAGACATTGGCAAAAATCATTACTTGTCACTTCATTTATGAACTACGTGTTCTTAATAAGAACTTCACTTGT
Protein sequenceShow/hide protein sequence
MSTSESKLQDAESNAAATKTLEDQPQSDTPNYSEEKSSEEASLSGKISESGGGDEGGEDIEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKNKEDIVEKCFEVTGA
LKKCMEAHPDYYEPILKAEKMAEEEAIIELEKETTPSASQQDTNSDEQKASVGGK