; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI05G24330 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G24330
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionConserved oligomeric Golgi complex subunit 1
Genome locationChr5:24002708..24003639
RNA-Seq ExpressionCSPI05G24330
SyntenyCSPI05G24330
Gene Ontology termsGO:0043231 - intracellular membrane-bounded organelle (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034474.1 uncharacterized protein E6C27_scaffold65G004850 [Cucumis melo var. makuwa]3.4e-3961.32Show/hide
Query:  VVHFLLVSNGFFVGVFIVPNGGVRILLVISGVVVRVLLVANGDVHVLLVSSGTAVRVLVPNGVAVHVVLVPNGVAVHVLVPNGVAVHVVLVPNGVAVHVL
        VV  LLVSNGFFVGVFIVPNG VR+LLVISG VVRVLLV NGD           VRVLV +G+AVH                       LVPNG+AVHVL
Subjt:  VVHFLLVSNGFFVGVFIVPNGGVRILLVISGVVVRVLLVANGDVHVLLVSSGTAVRVLVPNGVAVHVVLVPNGVAVHVLVPNGVAVHVVLVPNGVAVHVL

Query:  VPNGVAVHVVLVPNGVAVHVLVPNGVAVHVFLVLLVPKGVAVHVFLVPSGVVVRVLLVANGIHAHVHLVGHAAAVVIVIFAIVAIFVLAVAFDLAVIFTL
        VPNGVAVHV LV +GVA HVLV N                         GVVVRVLLVANGIHAHVHLVGHAAAVVIVIF IVAI V  VAFDL V FTL
Subjt:  VPNGVAVHVVLVPNGVAVHVLVPNGVAVHVFLVLLVPKGVAVHVFLVPSGVVVRVLLVANGIHAHVHLVGHAAAVVIVIFAIVAIFVLAVAFDLAVIFTL

Query:  LVIFAVVKWTSS
        LVIF VVK TSS
Subjt:  LVIFAVVKWTSS

KAE8648766.1 hypothetical protein Csa_007998 [Cucumis sativus]1.1e-10694.8Show/hide
Query:  MKRRRLDPCLMMLNFKALQSLQNQNRSVGSPAVHVVVHFLLVSNGFFVGVFIVPNGGVRILLVISGVVVRVLLVANGDVHVLLVSSGTAVRVLVPNGVAV
        MKRRRLDPCLMMLNFKALQSLQNQNRSVGSPAVHVVVHFLLVSNGFFVGVFIVPNGGVRILLVISGVVVRVLLVANGDVHVLLVSSGTAVRVLVPNGVAV
Subjt:  MKRRRLDPCLMMLNFKALQSLQNQNRSVGSPAVHVVVHFLLVSNGFFVGVFIVPNGGVRILLVISGVVVRVLLVANGDVHVLLVSSGTAVRVLVPNGVAV

Query:  HVVLVPNGVAVHVLVPNGVAVHVVLVPNGVAVH-VLVPNGVAVHVVLVPNGVAVHVLVPNGVAVHVFLVLLVPKGVAVHVFLVPSGVVVRVLLVANGIHA
        HV          VLVPNGVAVHVVLV NGVAVH VLV NGVAVHVVLVPNGVAVHVLVPNGVAVHVFLVLLVPKGVAVHVFLVPSGVVVRVLLVANGIHA
Subjt:  HVVLVPNGVAVHVLVPNGVAVHVVLVPNGVAVH-VLVPNGVAVHVVLVPNGVAVHVLVPNGVAVHVFLVLLVPKGVAVHVFLVPSGVVVRVLLVANGIHA

Query:  HVHLVGHAAAVVIVIFAIVAIFVLAVAFDLAVIFTLLVIFAVVKWTSSQK
        HVHLVGHAAAVVIVIFAIVAIFVLAVAFDLAVIFTLLVIFAVVKWTSSQK
Subjt:  HVHLVGHAAAVVIVIFAIVAIFVLAVAFDLAVIFTLLVIFAVVKWTSSQK

KAG6574041.1 hypothetical protein SDJN03_27928, partial [Cucurbita argyrosperma subsp. sororia]3.3e-2654.59Show/hide
Query:  LLVISGVVVRVLLVANGDVHVLLVSSGTAVRVLVPNGVAVHVVLVPNGVAVHVLVPNGVAVHVVLVPNGVAVHVLVPNGVAVHVVLVPNGVAVHVLVPNG
        +LV +GV V V LVANG    LLV++G A+ +LV NGVA+H +LV NG ++H+LV NGVA+H +LV NGVA+H+LV NGVA+H +LV NG A+H+LV NG
Subjt:  LLVISGVVVRVLLVANGDVHVLLVSSGTAVRVLVPNGVAVHVVLVPNGVAVHVLVPNGVAVHVVLVPNGVAVHVLVPNGVAVHVVLVPNGVAVHVLVPNG

Query:  VAVHVFLVLLVPKGVAVHVFLVPSGVVVRVLLVANGIHAHV---------HLVGHAAA-----VVIVIFAIVAIFVLAVAFDLAVIFTLLVIFAVV
        VA+HV     V  G+AVHV LV +G+ V VLLVANG+  HV          LV HAAA     VV+VIF  V IF   V F +AVI  LL+IF VV
Subjt:  VAVHVFLVLLVPKGVAVHVFLVPSGVVVRVLLVANGIHAHV---------HLVGHAAA-----VVIVIFAIVAIFVLAVAFDLAVIFTLLVIFAVV

KAG7013100.1 hypothetical protein SDJN02_25856, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-2555.91Show/hide
Query:  LLVANG-DVHVLLVSSGTAVRVLVPNGVAVHVVLVPNGVAVHVLVPNGVAVHVVLVPNGVAVHVLVPNGVAVHVVLVPNGVAVHVLVPNGVAVHVFLVLL
        +LVANG  VHV LV++G AV +LV NGVA+H +LV NGVA+H+LV NG ++H +LV NGVA+H+LV NGVA+H +LV NG A+H+LV NGVA+HV     
Subjt:  LLVANG-DVHVLLVSSGTAVRVLVPNGVAVHVVLVPNGVAVHVLVPNGVAVHVVLVPNGVAVHVLVPNGVAVHVVLVPNGVAVHVLVPNGVAVHVFLVLL

Query:  VPKGVAVHVFLVPSGVVVRVLLVANGIHAHV---------HLVGHAAA-----VVIVIFAIVAIFVLAVAFDLAVIFTLLVIFAVV
        V  G+AVHV LV +G+ V VLLVANG+  HV          LV HAAA     VV+VIF  V IF   V F +AVI  LL+IF VV
Subjt:  VPKGVAVHVFLVPSGVVVRVLLVANGIHAHV---------HLVGHAAA-----VVIVIFAIVAIFVLAVAFDLAVIFTLLVIFAVV

XP_030200041.1 formin-2-like [Gadus morhua]7.7e-0742.7Show/hide
Query:  VVVHFLLVSNGFFVGVF-IVPNGGVRILLVISGVVVRVLLVANG-DVHVLLVSSGTAVRVL-VPNGVAVHVVLVPNGVAVHVL-VPNGVAVHVVLVPNGV
        +VVH + V  G  V V  ++P   V+++ V+ G+VV V+ V  G  VHV+ V  G  V V+ V  G+ VHVV V  G+ VHV+ V  G+ VHVV V  G+
Subjt:  VVVHFLLVSNGFFVGVF-IVPNGGVRILLVISGVVVRVLLVANG-DVHVLLVSSGTAVRVL-VPNGVAVHVVLVPNGVAVHVL-VPNGVAVHVVLVPNGV

Query:  AVHVL-VPNGVAVHVVLVPNGVAVHVL-VPNGVAVHVFLVLLVPKGVAVHVFLVPSGVVVRVLLVANGIHAHVHLVGHAAAVVIV
         VHV+ V  G+ VHVV V  G+ VHV+ V  G+ VHV  VL    G+ VHV  V  G+VV V+ V  G+  HV  V   + V++V
Subjt:  AVHVL-VPNGVAVHVVLVPNGVAVHVL-VPNGVAVHVFLVLLVPKGVAVHVFLVPSGVVVRVLLVANGIHAHVHLVGHAAAVVIV

TrEMBL top hitse value%identityAlignment
A0A0A0KU91 Uncharacterized protein5.1e-4152.21Show/hide
Query:  MKRRRLDPCLMMLNFKALQSLQNQNRSVGSPAVHVVVHFLLVSNGFFVGVFIVPNGGVRILLVISGVVVRVLLVANGDVHVLLVSSGTAVRVLVPNGVAV
        MKRRRLDPCLMMLNFKALQSLQNQNRSVGSPAVHVVVHFLLVSNGFFVGVFIVPNGGVRILLVI                                    
Subjt:  MKRRRLDPCLMMLNFKALQSLQNQNRSVGSPAVHVVVHFLLVSNGFFVGVFIVPNGGVRILLVISGVVVRVLLVANGDVHVLLVSSGTAVRVLVPNGVAV

Query:  HVVLVPNGVAVHVLVPNGVAVHVVLVPNGVAVHVLVPNGVAVHVVLVPNGVAVHVLVPNGVAVHVFLVLLVPKGVAVHVFLVPSGVVVRVLLVANGIHAH
                                                                                           SGVVVRVLLVANGIHAH
Subjt:  HVVLVPNGVAVHVLVPNGVAVHVVLVPNGVAVHVLVPNGVAVHVVLVPNGVAVHVLVPNGVAVHVFLVLLVPKGVAVHVFLVPSGVVVRVLLVANGIHAH

Query:  VHLVGHAAAVVIVIFAIVAIFVLAVAFDLAVIFTLLVIFAVVKWTSSQK
        VHLVGHAAAVVIVIFAIVAIFVLAVAFDLAVIFTLLVIFAVVKWTSSQK
Subjt:  VHLVGHAAAVVIVIFAIVAIFVLAVAFDLAVIFTLLVIFAVVKWTSSQK

A0A0L0G0A6 TBPIP domain-containing protein1.6e-0538.1Show/hide
Query:  VSSGTAVRVLVPNGVAVHVVLVPNGVAVHVLVPNGVAVHVVLVPNGVAVHVLVPNGVAVHVVLVPNGVAVHVLVPNGVAVHVFLV------LLVPKGVAV
        + +G    V +P G+ VHV L P G+ VHV +P G+ VHV  +P    VHV +P G +VH   +P G  VHV +P G  +H+ ++      + +P G+ V
Subjt:  VSSGTAVRVLVPNGVAVHVVLVPNGVAVHVLVPNGVAVHVVLVPNGVAVHVLVPNGVAVHVVLVPNGVAVHVLVPNGVAVHVFLV------LLVPKGVAV

Query:  HVFLVPSGVVVRVLLVANGIHAHVHL
        HV ++P+G+VV V L   G+  HV +
Subjt:  HVFLVPSGVVVRVLLVANGIHAHVHL

A0A5A7STD6 Uncharacterized protein1.7e-3961.32Show/hide
Query:  VVHFLLVSNGFFVGVFIVPNGGVRILLVISGVVVRVLLVANGDVHVLLVSSGTAVRVLVPNGVAVHVVLVPNGVAVHVLVPNGVAVHVVLVPNGVAVHVL
        VV  LLVSNGFFVGVFIVPNG VR+LLVISG VVRVLLV NGD           VRVLV +G+AVH                       LVPNG+AVHVL
Subjt:  VVHFLLVSNGFFVGVFIVPNGGVRILLVISGVVVRVLLVANGDVHVLLVSSGTAVRVLVPNGVAVHVVLVPNGVAVHVLVPNGVAVHVVLVPNGVAVHVL

Query:  VPNGVAVHVVLVPNGVAVHVLVPNGVAVHVFLVLLVPKGVAVHVFLVPSGVVVRVLLVANGIHAHVHLVGHAAAVVIVIFAIVAIFVLAVAFDLAVIFTL
        VPNGVAVHV LV +GVA HVLV N                         GVVVRVLLVANGIHAHVHLVGHAAAVVIVIF IVAI V  VAFDL V FTL
Subjt:  VPNGVAVHVVLVPNGVAVHVLVPNGVAVHVFLVLLVPKGVAVHVFLVPSGVVVRVLLVANGIHAHVHLVGHAAAVVIVIFAIVAIFVLAVAFDLAVIFTL

Query:  LVIFAVVKWTSS
        LVIF VVK TSS
Subjt:  LVIFAVVKWTSS

A0A7J5Y7R6 Uncharacterized protein3.5e-0538.25Show/hide
Query:  QSLQNQNRSVGSPAVHVVVHFLLVSNGFFVGVFIVPNGGVRILLVISGVVVRVLLVANGDVH-VLLVSSGT-AVRVLVPNGVAVHVVLVPNG-VAVHVLV
        +S  +  R+  SP   VV+  +L++ G  + + + P      L    G +  VLLV  G +  VLLV  G+ ++ +LVP G    V+LVP G +++ +LV
Subjt:  QSLQNQNRSVGSPAVHVVVHFLLVSNGFFVGVFIVPNGGVRILLVISGVVVRVLLVANGDVH-VLLVSSGT-AVRVLVPNGVAVHVVLVPNG-VAVHVLV

Query:  PNGVAVHVVLVPNG-VAVHVLVPNGVAVHVVLVPNG-VAVHVLVPNGVAVHVFLVLLVPKGVAVHVFLVPSGVVVRVLLVANG
        P G    V+LVP G + + +LVP G    V+LVP G +++ +LVP G    +FLVLLVP+G    V LVP G +  VLL A G
Subjt:  PNGVAVHVVLVPNG-VAVHVLVPNGVAVHVVLVPNG-VAVHVLVPNGVAVHVFLVLLVPKGVAVHVFLVPSGVVVRVLLVANG

A7SV62 Conserved oligomeric Golgi complex subunit 16.3e-0743.4Show/hide
Query:  SVGSPAVHVVVHFLLVSNGFFVGVFIVPNGGV---RILLVISGVVVRVL-LVANGDV--HVLLVSSGTAVRV--LVPNGVAVHVV-LVPNGVAVHV--LV
        SV    V  V   LL+ NG  V V ++   GV    +LL+++GVVV V+ L+ NG V   VLL+ +G  V V  L+ NGV V VV L+ NGV V V  L+
Subjt:  SVGSPAVHVVVHFLLVSNGFFVGVFIVPNGGV---RILLVISGVVVRVL-LVANGDV--HVLLVSSGTAVRV--LVPNGVAVHVV-LVPNGVAVHV--LV

Query:  PNGVAVHVV-LVPNGVAVHV--LVPNGVAVHVV-LVPNGVAVHV--LVPNGVAVHVFLVLLVPKGVAVH-VFLVPSGVVVR-VLLVANGIHAHVHLVGHA
         NGV V VV L+ NGV V V  L+ NGV V VV L+ NGV V V  L+ NGV V V  VLL+  GV V  V L+ +GVVV  VLL+ANG+   V      
Subjt:  PNGVAVHVV-LVPNGVAVHV--LVPNGVAVHVV-LVPNGVAVHV--LVPNGVAVHVFLVLLVPKGVAVH-VFLVPSGVVVR-VLLVANGIHAHVHLVGHA

Query:  AAVVIVIFAIVAIFVLAVAFDLAVIFTLLVIFAVV
          V++++  +V   VL +   + V   LL++  VV
Subjt:  AAVVIVIFAIVAIFVLAVAFDLAVIFTLLVIFAVV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAGGCGCAGGCTGGATCCATGCCTAATGATGCTAAATTTCAAGGCACTCCAGTCTCTTCAAAATCAAAACCGAAGTGTTGGTTCTCCTGCTGTTCATGTAGTTGT
TCATTTTCTTCTTGTTTCAAATGGATTTTTTGTTGGTGTTTTTATTGTCCCAAATGGAGGTGTTCGTATTCTTCTTGTTATAAGCGGAGTTGTTGTTCGTGTTCTTCTTG
TTGCAAATGGAGATGTTCATGTTCTTCTTGTTTCAAGTGGAACTGCAGTTCGTGTTCTTGTTCCAAATGGAGTTGCAGTTCATGTTGTTCTTGTCCCAAATGGAGTTGCA
GTTCATGTTCTTGTTCCAAATGGAGTTGCAGTTCATGTTGTTCTTGTCCCAAATGGAGTTGCAGTTCATGTTCTTGTTCCAAATGGAGTTGCAGTTCATGTTGTTCTTGT
CCCAAATGGAGTTGCAGTTCATGTTCTTGTTCCAAATGGAGTTGCAGTTCATGTTTTTCTTGTTCTTCTTGTTCCAAAAGGAGTTGCAGTTCATGTTTTTCTTGTTCCAA
GTGGAGTTGTGGTTCGTGTTCTTCTTGTTGCAAATGGGATTCATGCACATGTTCATCTTGTTGGACATGCAGCTGCTGTAGTAATTGTCATTTTCGCGATTGTTGCCATT
TTCGTCCTCGCTGTTGCTTTCGACCTCGCTGTCATATTTACCCTTCTTGTCATTTTTGCAGTTGTTAAATGGACGTCGTCCCAGAAAGTCACCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAGGCGCAGGCTGGATCCATGCCTAATGATGCTAAATTTCAAGGCACTCCAGTCTCTTCAAAATCAAAACCGAAGTGTTGGTTCTCCTGCTGTTCATGTAGTTGT
TCATTTTCTTCTTGTTTCAAATGGATTTTTTGTTGGTGTTTTTATTGTCCCAAATGGAGGTGTTCGTATTCTTCTTGTTATAAGCGGAGTTGTTGTTCGTGTTCTTCTTG
TTGCAAATGGAGATGTTCATGTTCTTCTTGTTTCAAGTGGAACTGCAGTTCGTGTTCTTGTTCCAAATGGAGTTGCAGTTCATGTTGTTCTTGTCCCAAATGGAGTTGCA
GTTCATGTTCTTGTTCCAAATGGAGTTGCAGTTCATGTTGTTCTTGTCCCAAATGGAGTTGCAGTTCATGTTCTTGTTCCAAATGGAGTTGCAGTTCATGTTGTTCTTGT
CCCAAATGGAGTTGCAGTTCATGTTCTTGTTCCAAATGGAGTTGCAGTTCATGTTTTTCTTGTTCTTCTTGTTCCAAAAGGAGTTGCAGTTCATGTTTTTCTTGTTCCAA
GTGGAGTTGTGGTTCGTGTTCTTCTTGTTGCAAATGGGATTCATGCACATGTTCATCTTGTTGGACATGCAGCTGCTGTAGTAATTGTCATTTTCGCGATTGTTGCCATT
TTCGTCCTCGCTGTTGCTTTCGACCTCGCTGTCATATTTACCCTTCTTGTCATTTTTGCAGTTGTTAAATGGACGTCGTCCCAGAAAGTCACCTGACTTTTTATACTAAT
CCTTTAGGTGTTTAGAGTCATTAAATGTAACATACCGAGTTCGAACAAACCCTCGTTGCAGTTTCGGGGGTTTCGGTTATTTTACCGGATAAATCATTAAATGTAACATA
CCGAGGTTCAAACAAACCCTCCTTGCAGTGTCGAGGGTTTCGATTATTTTAC
Protein sequenceShow/hide protein sequence
MKRRRLDPCLMMLNFKALQSLQNQNRSVGSPAVHVVVHFLLVSNGFFVGVFIVPNGGVRILLVISGVVVRVLLVANGDVHVLLVSSGTAVRVLVPNGVAVHVVLVPNGVA
VHVLVPNGVAVHVVLVPNGVAVHVLVPNGVAVHVVLVPNGVAVHVLVPNGVAVHVFLVLLVPKGVAVHVFLVPSGVVVRVLLVANGIHAHVHLVGHAAAVVIVIFAIVAI
FVLAVAFDLAVIFTLLVIFAVVKWTSSQKVT