; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI05G24380 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G24380
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRibosome maturation factor RimP
Genome locationChr5:24026297..24028691
RNA-Seq ExpressionCSPI05G24380
SyntenyCSPI05G24380
Gene Ontology termsGO:0042274 - ribosomal small subunit biogenesis (biological process)
InterPro domainsIPR003728 - Ribosome maturation factor RimP


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK09031.1 F4N2.17, putative isoform 1 [Cucumis melo var. makuwa]3.6e-13987.46Show/hide
Query:  MLRNKIAHTLLRRSPIAAVSSPLSSLGAPSSTVFASEPTPSQTTCSSFSCRHHAFPFS----LRLFDTNSSKHFRDEVKEQNPPQYGREDEGETTDGWEE
        M  NKIA TLLRRS I AVSSPLSSLGAPSSTVFASE TP QTTCSSFSCR HAFPFS    LRLF T+SSK FRDEVKEQNP QYGREDEGETTDGWEE
Subjt:  MLRNKIAHTLLRRSPIAAVSSPLSSLGAPSSTVFASEPTPSQTTCSSFSCRHHAFPFS----LRLFDTNSSKHFRDEVKEQNPPQYGREDEGETTDGWEE

Query:  DDDDLEPELGDGGDGGGVVLQGVPWGEHVLLLAQEVLLQFGDDIKLYSFKVTPRGYIYVRLDKLSHEFGCPNLEELDSYSKEYKKRLDETGALGNIPDDL
        DDDDLEPELGDGGDGGGVVLQGVPWGEHVLLLAQEVLLQFGDDIKLYSFK TPRG                 +EELDSYSKEYKKRLDETGALGNIPDDL
Subjt:  DDDDLEPELGDGGDGGGVVLQGVPWGEHVLLLAQEVLLQFGDDIKLYSFKVTPRGYIYVRLDKLSHEFGCPNLEELDSYSKEYKKRLDETGALGNIPDDL

Query:  ALEVSSPGAERLLKVPDDLLRFKATPMRVSYIEDVDSRGSENDGVFMLDHLELESESCIWKLANVRENRDPLSKGRPLTRKQKEWRLKLPYANHKKVFLY
        ALEVSSPGAERLLKVPDDL RFKATPMRVSYIEDVDSRGSENDGVFMLDH+ELESESCIWKLANVRENRDPLSKGRPLTRKQKEWRLKLPYANHKKVFLY
Subjt:  ALEVSSPGAERLLKVPDDLLRFKATPMRVSYIEDVDSRGSENDGVFMLDHLELESESCIWKLANVRENRDPLSKGRPLTRKQKEWRLKLPYANHKKVFLY

Query:  LKC
        L+C
Subjt:  LKC

XP_008446450.1 PREDICTED: uncharacterized protein LOC103489189 isoform X1 [Cucumis melo]1.1e-14892.57Show/hide
Query:  MLRNKIAHTLLRRSPIAAVSSPLSSLGAPSSTVFASEPTPSQTTCSSFSCRHHAFPFS----LRLFDTNSSKHFRDEVKEQNPPQYGREDEGETTDGWEE
        M  NKIA TLLRRS I AVSSPLSSLGAPSSTVFASE TP QTTCSSFSCR HAFPFS    LRLF T+SSK FRDEVKEQNP QYGREDEGETTDGWEE
Subjt:  MLRNKIAHTLLRRSPIAAVSSPLSSLGAPSSTVFASEPTPSQTTCSSFSCRHHAFPFS----LRLFDTNSSKHFRDEVKEQNPPQYGREDEGETTDGWEE

Query:  DDDDLEPELGDGGDGGGVVLQGVPWGEHVLLLAQEVLLQFGDDIKLYSFKVTPRGYIYVRLDKLSHEFGCPNLEELDSYSKEYKKRLDETGALGNIPDDL
        DDDDLEPELGDGGDGGGVVLQGVPWGEHVLLLAQEVLLQFGDDIKLYSFK TPRGYIYVRLDKLSH+FGCP++EELDSYSKEYKKRLDETGALGNIPDDL
Subjt:  DDDDLEPELGDGGDGGGVVLQGVPWGEHVLLLAQEVLLQFGDDIKLYSFKVTPRGYIYVRLDKLSHEFGCPNLEELDSYSKEYKKRLDETGALGNIPDDL

Query:  ALEVSSPGAERLLKVPDDLLRFKATPMRVSYIEDVDSRGSENDGVFMLDHLELESESCIWKLANVRENRDPLSKGRPLTRKQKEWRLKLPYANHKK
        ALEVSSPGAERLLKVPDDL RFKATPMRVSYIEDVDSRGSENDGVFMLDH+ELESESCIWKLANVRENRDPLSKGRPLTRKQKEWRLKLPYANHKK
Subjt:  ALEVSSPGAERLLKVPDDLLRFKATPMRVSYIEDVDSRGSENDGVFMLDHLELESESCIWKLANVRENRDPLSKGRPLTRKQKEWRLKLPYANHKK

XP_008446452.1 PREDICTED: uncharacterized protein LOC103489189 isoform X2 [Cucumis melo]1.1e-14892.57Show/hide
Query:  MLRNKIAHTLLRRSPIAAVSSPLSSLGAPSSTVFASEPTPSQTTCSSFSCRHHAFPFS----LRLFDTNSSKHFRDEVKEQNPPQYGREDEGETTDGWEE
        M  NKIA TLLRRS I AVSSPLSSLGAPSSTVFASE TP QTTCSSFSCR HAFPFS    LRLF T+SSK FRDEVKEQNP QYGREDEGETTDGWEE
Subjt:  MLRNKIAHTLLRRSPIAAVSSPLSSLGAPSSTVFASEPTPSQTTCSSFSCRHHAFPFS----LRLFDTNSSKHFRDEVKEQNPPQYGREDEGETTDGWEE

Query:  DDDDLEPELGDGGDGGGVVLQGVPWGEHVLLLAQEVLLQFGDDIKLYSFKVTPRGYIYVRLDKLSHEFGCPNLEELDSYSKEYKKRLDETGALGNIPDDL
        DDDDLEPELGDGGDGGGVVLQGVPWGEHVLLLAQEVLLQFGDDIKLYSFK TPRGYIYVRLDKLSH+FGCP++EELDSYSKEYKKRLDETGALGNIPDDL
Subjt:  DDDDLEPELGDGGDGGGVVLQGVPWGEHVLLLAQEVLLQFGDDIKLYSFKVTPRGYIYVRLDKLSHEFGCPNLEELDSYSKEYKKRLDETGALGNIPDDL

Query:  ALEVSSPGAERLLKVPDDLLRFKATPMRVSYIEDVDSRGSENDGVFMLDHLELESESCIWKLANVRENRDPLSKGRPLTRKQKEWRLKLPYANHKK
        ALEVSSPGAERLLKVPDDL RFKATPMRVSYIEDVDSRGSENDGVFMLDH+ELESESCIWKLANVRENRDPLSKGRPLTRKQKEWRLKLPYANHKK
Subjt:  ALEVSSPGAERLLKVPDDLLRFKATPMRVSYIEDVDSRGSENDGVFMLDHLELESESCIWKLANVRENRDPLSKGRPLTRKQKEWRLKLPYANHKK

XP_008446453.1 PREDICTED: uncharacterized protein LOC103489189 isoform X3 [Cucumis melo]7.5e-15392.41Show/hide
Query:  MLRNKIAHTLLRRSPIAAVSSPLSSLGAPSSTVFASEPTPSQTTCSSFSCRHHAFPFS----LRLFDTNSSKHFRDEVKEQNPPQYGREDEGETTDGWEE
        M  NKIA TLLRRS I AVSSPLSSLGAPSSTVFASE TP QTTCSSFSCR HAFPFS    LRLF T+SSK FRDEVKEQNP QYGREDEGETTDGWEE
Subjt:  MLRNKIAHTLLRRSPIAAVSSPLSSLGAPSSTVFASEPTPSQTTCSSFSCRHHAFPFS----LRLFDTNSSKHFRDEVKEQNPPQYGREDEGETTDGWEE

Query:  DDDDLEPELGDGGDGGGVVLQGVPWGEHVLLLAQEVLLQFGDDIKLYSFKVTPRGYIYVRLDKLSHEFGCPNLEELDSYSKEYKKRLDETGALGNIPDDL
        DDDDLEPELGDGGDGGGVVLQGVPWGEHVLLLAQEVLLQFGDDIKLYSFK TPRGYIYVRLDKLSH+FGCP++EELDSYSKEYKKRLDETGALGNIPDDL
Subjt:  DDDDLEPELGDGGDGGGVVLQGVPWGEHVLLLAQEVLLQFGDDIKLYSFKVTPRGYIYVRLDKLSHEFGCPNLEELDSYSKEYKKRLDETGALGNIPDDL

Query:  ALEVSSPGAERLLKVPDDLLRFKATPMRVSYIEDVDSRGSENDGVFMLDHLELESESCIWKLANVRENRDPLSKGRPLTRKQKEWRLKLPYANHKKVFLY
        ALEVSSPGAERLLKVPDDL RFKATPMRVSYIEDVDSRGSENDGVFMLDH+ELESESCIWKLANVRENRDPLSKGRPLTRKQKEWRLKLPYANHKKVFLY
Subjt:  ALEVSSPGAERLLKVPDDLLRFKATPMRVSYIEDVDSRGSENDGVFMLDHLELESESCIWKLANVRENRDPLSKGRPLTRKQKEWRLKLPYANHKKVFLY

Query:  LKC
        L+C
Subjt:  LKC

XP_011655714.1 uncharacterized protein LOC101211568 [Cucumis sativus]6.8e-17899.37Show/hide
Query:  MSFLPPPHQSTDYANTMLRNKIAHTLLRRSPIAAVSSPLSSLGAPSSTVFASEPTPSQTTCSSFSCRHHAFPFSLRLFDTNSSKHFRDEVKEQNPPQYGR
        MSFLPPPHQSTDYANTMLRNKIAHTLLRRSPIAAVSSPLSSLGAPSSTVFASEPTPSQTTCSSFSCRHHAFPFSLRLF+TNSSKHFRDEVKEQNPPQYGR
Subjt:  MSFLPPPHQSTDYANTMLRNKIAHTLLRRSPIAAVSSPLSSLGAPSSTVFASEPTPSQTTCSSFSCRHHAFPFSLRLFDTNSSKHFRDEVKEQNPPQYGR

Query:  EDEGETTDGWEEDDDDLEPELGDGGDGGGVVLQGVPWGEHVLLLAQEVLLQFGDDIKLYSFKVTPRGYIYVRLDKLSHEFGCPNLEELDSYSKEYKKRLD
        EDEGETTDGWEEDDDDLEPELGDGGDGGGVVLQGVPWGEHVLLLAQEVLLQFGDDIKLYSFKVTPRGYIYVRLDKLSHEFGCPNLEELDSYSKEYKKRLD
Subjt:  EDEGETTDGWEEDDDDLEPELGDGGDGGGVVLQGVPWGEHVLLLAQEVLLQFGDDIKLYSFKVTPRGYIYVRLDKLSHEFGCPNLEELDSYSKEYKKRLD

Query:  ETGALGNIPDDLALEVSSPGAERLLKVPDDLLRFKATPMRVSYIEDVDSRGSENDGVFMLDHLELESESCIWKLANVRENRDPLSKGRPLTRKQKEWRLK
        ETGALGNIPDDLALEVSSPGAERLLK+PDDLLRFKATPMRVSYIEDVDSRGSENDGVFMLDHLELESESCIWKLANVRENRDPLSKGRPLTRKQKEWRLK
Subjt:  ETGALGNIPDDLALEVSSPGAERLLKVPDDLLRFKATPMRVSYIEDVDSRGSENDGVFMLDHLELESESCIWKLANVRENRDPLSKGRPLTRKQKEWRLK

Query:  LPYANHKKVFLYLKC
        LPYANHKKVFLYLKC
Subjt:  LPYANHKKVFLYLKC

TrEMBL top hitse value%identityAlignment
A0A0A0KW71 Uncharacterized protein3.3e-17899.37Show/hide
Query:  MSFLPPPHQSTDYANTMLRNKIAHTLLRRSPIAAVSSPLSSLGAPSSTVFASEPTPSQTTCSSFSCRHHAFPFSLRLFDTNSSKHFRDEVKEQNPPQYGR
        MSFLPPPHQSTDYANTMLRNKIAHTLLRRSPIAAVSSPLSSLGAPSSTVFASEPTPSQTTCSSFSCRHHAFPFSLRLF+TNSSKHFRDEVKEQNPPQYGR
Subjt:  MSFLPPPHQSTDYANTMLRNKIAHTLLRRSPIAAVSSPLSSLGAPSSTVFASEPTPSQTTCSSFSCRHHAFPFSLRLFDTNSSKHFRDEVKEQNPPQYGR

Query:  EDEGETTDGWEEDDDDLEPELGDGGDGGGVVLQGVPWGEHVLLLAQEVLLQFGDDIKLYSFKVTPRGYIYVRLDKLSHEFGCPNLEELDSYSKEYKKRLD
        EDEGETTDGWEEDDDDLEPELGDGGDGGGVVLQGVPWGEHVLLLAQEVLLQFGDDIKLYSFKVTPRGYIYVRLDKLSHEFGCPNLEELDSYSKEYKKRLD
Subjt:  EDEGETTDGWEEDDDDLEPELGDGGDGGGVVLQGVPWGEHVLLLAQEVLLQFGDDIKLYSFKVTPRGYIYVRLDKLSHEFGCPNLEELDSYSKEYKKRLD

Query:  ETGALGNIPDDLALEVSSPGAERLLKVPDDLLRFKATPMRVSYIEDVDSRGSENDGVFMLDHLELESESCIWKLANVRENRDPLSKGRPLTRKQKEWRLK
        ETGALGNIPDDLALEVSSPGAERLLK+PDDLLRFKATPMRVSYIEDVDSRGSENDGVFMLDHLELESESCIWKLANVRENRDPLSKGRPLTRKQKEWRLK
Subjt:  ETGALGNIPDDLALEVSSPGAERLLKVPDDLLRFKATPMRVSYIEDVDSRGSENDGVFMLDHLELESESCIWKLANVRENRDPLSKGRPLTRKQKEWRLK

Query:  LPYANHKKVFLYLKC
        LPYANHKKVFLYLKC
Subjt:  LPYANHKKVFLYLKC

A0A1S3BEL4 uncharacterized protein LOC103489189 isoform X15.5e-14992.57Show/hide
Query:  MLRNKIAHTLLRRSPIAAVSSPLSSLGAPSSTVFASEPTPSQTTCSSFSCRHHAFPFS----LRLFDTNSSKHFRDEVKEQNPPQYGREDEGETTDGWEE
        M  NKIA TLLRRS I AVSSPLSSLGAPSSTVFASE TP QTTCSSFSCR HAFPFS    LRLF T+SSK FRDEVKEQNP QYGREDEGETTDGWEE
Subjt:  MLRNKIAHTLLRRSPIAAVSSPLSSLGAPSSTVFASEPTPSQTTCSSFSCRHHAFPFS----LRLFDTNSSKHFRDEVKEQNPPQYGREDEGETTDGWEE

Query:  DDDDLEPELGDGGDGGGVVLQGVPWGEHVLLLAQEVLLQFGDDIKLYSFKVTPRGYIYVRLDKLSHEFGCPNLEELDSYSKEYKKRLDETGALGNIPDDL
        DDDDLEPELGDGGDGGGVVLQGVPWGEHVLLLAQEVLLQFGDDIKLYSFK TPRGYIYVRLDKLSH+FGCP++EELDSYSKEYKKRLDETGALGNIPDDL
Subjt:  DDDDLEPELGDGGDGGGVVLQGVPWGEHVLLLAQEVLLQFGDDIKLYSFKVTPRGYIYVRLDKLSHEFGCPNLEELDSYSKEYKKRLDETGALGNIPDDL

Query:  ALEVSSPGAERLLKVPDDLLRFKATPMRVSYIEDVDSRGSENDGVFMLDHLELESESCIWKLANVRENRDPLSKGRPLTRKQKEWRLKLPYANHKK
        ALEVSSPGAERLLKVPDDL RFKATPMRVSYIEDVDSRGSENDGVFMLDH+ELESESCIWKLANVRENRDPLSKGRPLTRKQKEWRLKLPYANHKK
Subjt:  ALEVSSPGAERLLKVPDDLLRFKATPMRVSYIEDVDSRGSENDGVFMLDHLELESESCIWKLANVRENRDPLSKGRPLTRKQKEWRLKLPYANHKK

A0A1S3BF35 uncharacterized protein LOC103489189 isoform X25.5e-14992.57Show/hide
Query:  MLRNKIAHTLLRRSPIAAVSSPLSSLGAPSSTVFASEPTPSQTTCSSFSCRHHAFPFS----LRLFDTNSSKHFRDEVKEQNPPQYGREDEGETTDGWEE
        M  NKIA TLLRRS I AVSSPLSSLGAPSSTVFASE TP QTTCSSFSCR HAFPFS    LRLF T+SSK FRDEVKEQNP QYGREDEGETTDGWEE
Subjt:  MLRNKIAHTLLRRSPIAAVSSPLSSLGAPSSTVFASEPTPSQTTCSSFSCRHHAFPFS----LRLFDTNSSKHFRDEVKEQNPPQYGREDEGETTDGWEE

Query:  DDDDLEPELGDGGDGGGVVLQGVPWGEHVLLLAQEVLLQFGDDIKLYSFKVTPRGYIYVRLDKLSHEFGCPNLEELDSYSKEYKKRLDETGALGNIPDDL
        DDDDLEPELGDGGDGGGVVLQGVPWGEHVLLLAQEVLLQFGDDIKLYSFK TPRGYIYVRLDKLSH+FGCP++EELDSYSKEYKKRLDETGALGNIPDDL
Subjt:  DDDDLEPELGDGGDGGGVVLQGVPWGEHVLLLAQEVLLQFGDDIKLYSFKVTPRGYIYVRLDKLSHEFGCPNLEELDSYSKEYKKRLDETGALGNIPDDL

Query:  ALEVSSPGAERLLKVPDDLLRFKATPMRVSYIEDVDSRGSENDGVFMLDHLELESESCIWKLANVRENRDPLSKGRPLTRKQKEWRLKLPYANHKK
        ALEVSSPGAERLLKVPDDL RFKATPMRVSYIEDVDSRGSENDGVFMLDH+ELESESCIWKLANVRENRDPLSKGRPLTRKQKEWRLKLPYANHKK
Subjt:  ALEVSSPGAERLLKVPDDLLRFKATPMRVSYIEDVDSRGSENDGVFMLDHLELESESCIWKLANVRENRDPLSKGRPLTRKQKEWRLKLPYANHKK

A0A1S3BF38 uncharacterized protein LOC103489189 isoform X33.7e-15392.41Show/hide
Query:  MLRNKIAHTLLRRSPIAAVSSPLSSLGAPSSTVFASEPTPSQTTCSSFSCRHHAFPFS----LRLFDTNSSKHFRDEVKEQNPPQYGREDEGETTDGWEE
        M  NKIA TLLRRS I AVSSPLSSLGAPSSTVFASE TP QTTCSSFSCR HAFPFS    LRLF T+SSK FRDEVKEQNP QYGREDEGETTDGWEE
Subjt:  MLRNKIAHTLLRRSPIAAVSSPLSSLGAPSSTVFASEPTPSQTTCSSFSCRHHAFPFS----LRLFDTNSSKHFRDEVKEQNPPQYGREDEGETTDGWEE

Query:  DDDDLEPELGDGGDGGGVVLQGVPWGEHVLLLAQEVLLQFGDDIKLYSFKVTPRGYIYVRLDKLSHEFGCPNLEELDSYSKEYKKRLDETGALGNIPDDL
        DDDDLEPELGDGGDGGGVVLQGVPWGEHVLLLAQEVLLQFGDDIKLYSFK TPRGYIYVRLDKLSH+FGCP++EELDSYSKEYKKRLDETGALGNIPDDL
Subjt:  DDDDLEPELGDGGDGGGVVLQGVPWGEHVLLLAQEVLLQFGDDIKLYSFKVTPRGYIYVRLDKLSHEFGCPNLEELDSYSKEYKKRLDETGALGNIPDDL

Query:  ALEVSSPGAERLLKVPDDLLRFKATPMRVSYIEDVDSRGSENDGVFMLDHLELESESCIWKLANVRENRDPLSKGRPLTRKQKEWRLKLPYANHKKVFLY
        ALEVSSPGAERLLKVPDDL RFKATPMRVSYIEDVDSRGSENDGVFMLDH+ELESESCIWKLANVRENRDPLSKGRPLTRKQKEWRLKLPYANHKKVFLY
Subjt:  ALEVSSPGAERLLKVPDDLLRFKATPMRVSYIEDVDSRGSENDGVFMLDHLELESESCIWKLANVRENRDPLSKGRPLTRKQKEWRLKLPYANHKKVFLY

Query:  LKC
        L+C
Subjt:  LKC

A0A5D3CAZ4 F4N2.17, putative isoform 11.8e-13987.46Show/hide
Query:  MLRNKIAHTLLRRSPIAAVSSPLSSLGAPSSTVFASEPTPSQTTCSSFSCRHHAFPFS----LRLFDTNSSKHFRDEVKEQNPPQYGREDEGETTDGWEE
        M  NKIA TLLRRS I AVSSPLSSLGAPSSTVFASE TP QTTCSSFSCR HAFPFS    LRLF T+SSK FRDEVKEQNP QYGREDEGETTDGWEE
Subjt:  MLRNKIAHTLLRRSPIAAVSSPLSSLGAPSSTVFASEPTPSQTTCSSFSCRHHAFPFS----LRLFDTNSSKHFRDEVKEQNPPQYGREDEGETTDGWEE

Query:  DDDDLEPELGDGGDGGGVVLQGVPWGEHVLLLAQEVLLQFGDDIKLYSFKVTPRGYIYVRLDKLSHEFGCPNLEELDSYSKEYKKRLDETGALGNIPDDL
        DDDDLEPELGDGGDGGGVVLQGVPWGEHVLLLAQEVLLQFGDDIKLYSFK TPRG                 +EELDSYSKEYKKRLDETGALGNIPDDL
Subjt:  DDDDLEPELGDGGDGGGVVLQGVPWGEHVLLLAQEVLLQFGDDIKLYSFKVTPRGYIYVRLDKLSHEFGCPNLEELDSYSKEYKKRLDETGALGNIPDDL

Query:  ALEVSSPGAERLLKVPDDLLRFKATPMRVSYIEDVDSRGSENDGVFMLDHLELESESCIWKLANVRENRDPLSKGRPLTRKQKEWRLKLPYANHKKVFLY
        ALEVSSPGAERLLKVPDDL RFKATPMRVSYIEDVDSRGSENDGVFMLDH+ELESESCIWKLANVRENRDPLSKGRPLTRKQKEWRLKLPYANHKKVFLY
Subjt:  ALEVSSPGAERLLKVPDDLLRFKATPMRVSYIEDVDSRGSENDGVFMLDHLELESESCIWKLANVRENRDPLSKGRPLTRKQKEWRLKLPYANHKKVFLY

Query:  LKC
        L+C
Subjt:  LKC

SwissProt top hitse value%identityAlignment
B0SH16 Ribosome maturation factor RimP1.0e-0635.16Show/hide
Query:  VLLQFGDDIKLYSFKVTPR---GYIYVRLDKLSHEFGCPNLEELDSYSKEYKKRLDETGALGNIPDDLALEVSSPGAERLLKVPDDLLRFK
        +L      + L+S +V  R     I + LD L+ + G  +LE+ ++ S+  K+ LD+ G       D  L+VSS GAER+L++P+DL+RF+
Subjt:  VLLQFGDDIKLYSFKVTPR---GYIYVRLDKLSHEFGCPNLEELDSYSKEYKKRLDETGALGNIPDDLALEVSSPGAERLLKVPDDLLRFK

Q04U33 Ribosome maturation factor RimP6.3e-0936.7Show/hide
Query:  IKLYSFKVTPR---GYIYVRLDKLSHEFGCPNLEELDSYSKEYKKRLDETGALGNIPD-DLALEVSSPGAERLLKVPDDLLRFKATPMRVSYIEDVDSRG
        +KLYS KV  R     I V LD L H +G  +L E +  S++ K+ L+        PD D  L+VSS GAER L +P+D+ RF+  P+R+ +      + 
Subjt:  IKLYSFKVTPR---GYIYVRLDKLSHEFGCPNLEELDSYSKEYKKRLDETGALGNIPD-DLALEVSSPGAERLLKVPDDLLRFKATPMRVSYIEDVDSRG

Query:  SENDGVFML
         E  G+F +
Subjt:  SENDGVFML

Q04ZJ3 Ribosome maturation factor RimP6.3e-0936.7Show/hide
Query:  IKLYSFKVTPR---GYIYVRLDKLSHEFGCPNLEELDSYSKEYKKRLDETGALGNIPD-DLALEVSSPGAERLLKVPDDLLRFKATPMRVSYIEDVDSRG
        +KLYS KV  R     I V LD L H +G  +L E +  S++ K+ L+        PD D  L+VSS GAER L +P+D+ RF+  P+R+ +      + 
Subjt:  IKLYSFKVTPR---GYIYVRLDKLSHEFGCPNLEELDSYSKEYKKRLDETGALGNIPD-DLALEVSSPGAERLLKVPDDLLRFKATPMRVSYIEDVDSRG

Query:  SENDGVFML
         E  G+F +
Subjt:  SENDGVFML

Q72NX1 Ribosome maturation factor RimP3.7e-0938.32Show/hide
Query:  IKLYSFKVTPR---GYIYVRLDKLSHEFGCPNLEELDSYSKEYKKRLDETGALGNIPD-DLALEVSSPGAERLLKVPDDLLRFKATPMRVSYIEDVDSRG
        +KLYS KV  R     I V LD L H +G  +L E +  S++ K+ L+        PD D  L+VSS GAER L +P DL RF+  P+R+ +  +   + 
Subjt:  IKLYSFKVTPR---GYIYVRLDKLSHEFGCPNLEELDSYSKEYKKRLDETGALGNIPD-DLALEVSSPGAERLLKVPDDLLRFKATPMRVSYIEDVDSRG

Query:  SENDGVF
         E +G+F
Subjt:  SENDGVF

Q8F7K3 Ribosome maturation factor RimP3.7e-0938.32Show/hide
Query:  IKLYSFKVTPR---GYIYVRLDKLSHEFGCPNLEELDSYSKEYKKRLDETGALGNIPD-DLALEVSSPGAERLLKVPDDLLRFKATPMRVSYIEDVDSRG
        +KLYS KV  R     I V LD L H +G  +L E +  S++ K+ L+        PD D  L+VSS GAER L +P DL RF+  P+R+ +  +   + 
Subjt:  IKLYSFKVTPR---GYIYVRLDKLSHEFGCPNLEELDSYSKEYKKRLDETGALGNIPD-DLALEVSSPGAERLLKVPDDLLRFKATPMRVSYIEDVDSRG

Query:  SENDGVF
         E +G+F
Subjt:  SENDGVF

Arabidopsis top hitse value%identityAlignment
AT1G69210.1 Uncharacterised protein family UPF00903.0e-7552.88Show/hide
Query:  SSTVFASEPTPSQTTCSSFSCRHHAFPFSLRLFDTNSS---------KHFRDEVKEQNPPQYGREDEGETTDGWEED-DDDLEPELGDGGDGGGVVLQGV
        S   F+S     +TT      R+  F  S+  F ++SS         K       E++  +Y   D+ E  + WEED D+D+E +LGDGGDGGG+VL+GV
Subjt:  SSTVFASEPTPSQTTCSSFSCRHHAFPFSLRLFDTNSS---------KHFRDEVKEQNPPQYGREDEGETTDGWEED-DDDLEPELGDGGDGGGVVLQGV

Query:  PWGEHVLLLAQEVLLQFGDDIKLYSFKVTPRGYIYVRLDKLSHEFGCPNLEELDSYSKEYKKRLDETGALGNIPDDLALEVSSPGAERLLKVPDDLLRFK
         WGE VL +A +VL Q   D++L++FK +PRGYIYVRLDKLS E+GCP ++EL+ +S+E+KKRLD+ GA   IP+DLALEVSSPGAERLL+VP+DL RFK
Subjt:  PWGEHVLLLAQEVLLQFGDDIKLYSFKVTPRGYIYVRLDKLSHEFGCPNLEELDSYSKEYKKRLDETGALGNIPDDLALEVSSPGAERLLKVPDDLLRFK

Query:  ATPMRVSYIEDVDSRGSENDGVFMLDHLELESESCIWKLANVRENRDPLSKGRPLTRKQKEWRLKLPYANHKKVFLYL
          PM VSY+E+ +SR +   GVF+L+ ++ ES++C+WKLA+VRENRDP SKGRPL+RKQK+ R+ LP+A+HKK+ LYL
Subjt:  ATPMRVSYIEDVDSRGSENDGVFMLDHLELESESCIWKLANVRENRDPLSKGRPLTRKQKEWRLKLPYANHKKVFLYL

AT1G69210.2 Uncharacterised protein family UPF00908.0e-3646.96Show/hide
Query:  SSTVFASEPTPSQTTCSSFSCRHHAFPFSLRLFDTNSS---------KHFRDEVKEQNPPQYGREDEGETTDGWEED-DDDLEPELGDGGDGGGVVLQGV
        S   F+S     +TT      R+  F  S+  F ++SS         K       E++  +Y   D+ E  + WEED D+D+E +LGDGGDGGG+VL+GV
Subjt:  SSTVFASEPTPSQTTCSSFSCRHHAFPFSLRLFDTNSS---------KHFRDEVKEQNPPQYGREDEGETTDGWEED-DDDLEPELGDGGDGGGVVLQGV

Query:  PWGEHVLLLAQEVLLQFGDDIKLYSFKVTPRGYIYVRLDKLSHEFGCPNLEELDSYSKEYKKRLDETGALGNIPDDLALEV
         WGE VL +A +VL Q   D++L++FK +PRGYIYVRLDKLS E+GCP ++EL+ +S+E+KKRLD+ GA   IP+DLALEV
Subjt:  PWGEHVLLLAQEVLLQFGDDIKLYSFKVTPRGYIYVRLDKLSHEFGCPNLEELDSYSKEYKKRLDETGALGNIPDDLALEV

AT1G77122.1 Uncharacterised protein family UPF00908.0e-4441.52Show/hide
Query:  EDEGETTDGWEEDDDD------LEPEL--GDGGDGGGVVLQGVPWGEHVLLLAQEVLLQFGDDIKLYSFKVTPRGYIYVRLDKLSHEFGCPNLEELDSYS
        +DE    D ++EDDDD       E EL  GDGG GGG+ L G  W +  L LA +V   F  D+ +Y+FK  P   I VR+++L+++FG P +E+++++S
Subjt:  EDEGETTDGWEEDDDD------LEPEL--GDGGDGGGVVLQGVPWGEHVLLLAQEVLLQFGDDIKLYSFKVTPRGYIYVRLDKLSHEFGCPNLEELDSYS

Query:  KEYKKRLDETGALGNIPDDLALEVSSPGAERLLKVPDDLLRFKATPMRVSYI-EDVDSRGSENDGVFMLDHLELESESCIWKLANVRENRDPLSKGRPLT
          Y+ +L E     +IPD+++LEVSSPG ER++++P DL R+K  PM V Y  ED ++ G   DG+F L   ++E++ CIW +A++R NR+   KGRPL+
Subjt:  KEYKKRLDETGALGNIPDDLALEVSSPGAERLLKVPDDLLRFKATPMRVSYI-EDVDSRGSENDGVFMLDHLELESESCIWKLANVRENRDPLSKGRPLT

Query:  RKQKEWRLKLPYANHKKVFLYLKC
        +KQ+EWRL+  + + + V L+ +C
Subjt:  RKQKEWRLKLPYANHKKVFLYLKC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCTTCCTGCCACCTCCCCATCAATCAACCGACTACGCAAACACAATGCTTCGTAACAAGATTGCTCATACTTTACTCCGTCGATCTCCAATCGCCGCCGTTTCCTC
TCCACTCTCCTCCCTCGGAGCACCCTCGTCTACAGTCTTTGCCTCTGAACCAACGCCTTCTCAAACTACTTGCTCCTCTTTCTCCTGTCGCCACCACGCGTTCCCCTTTT
CCCTGCGGTTGTTCGATACCAATTCCTCTAAACACTTTCGAGATGAAGTCAAAGAACAAAATCCTCCTCAGTATGGGAGGGAAGATGAGGGAGAAACCACGGATGGATGG
GAAGAAGACGATGATGATCTGGAGCCTGAGCTTGGTGATGGAGGGGATGGTGGTGGTGTCGTTTTACAAGGCGTGCCATGGGGTGAGCATGTTCTTCTTCTTGCTCAAGA
GGTCCTGCTGCAATTTGGCGATGACATAAAACTGTATTCTTTCAAGGTCACTCCACGTGGGTACATTTATGTCAGATTAGATAAACTCTCACACGAATTTGGTTGTCCCA
ACCTGGAGGAGCTTGATAGTTATAGCAAAGAGTACAAAAAGAGATTAGATGAAACTGGAGCACTTGGAAATATTCCCGATGATTTAGCCCTGGAGGTATCGTCTCCAGGT
GCAGAGAGATTACTGAAGGTTCCAGATGATCTGCTTAGATTTAAAGCCACGCCAATGCGAGTTTCTTACATTGAAGATGTAGACTCGAGAGGCTCTGAAAATGATGGAGT
TTTTATGTTGGATCATTTAGAATTGGAATCTGAAAGTTGTATCTGGAAATTGGCAAATGTGAGGGAAAACCGAGATCCTTTAAGTAAGGGCAGGCCTTTGACTCGTAAGC
AGAAAGAATGGAGGTTAAAGTTACCCTATGCAAATCATAAGAAGGTATTCCTTTACCTTAAATGCTGA
mRNA sequenceShow/hide mRNA sequence
GTTGTTTTACAAGTTCATTAACCTTTTTATTTCTGTTAGCACCAACAACATCAAAGTTGGAGCAAAATAAACAAAATGTAGAGCAGAATTGAAATGATGAAATTAACAAG
AGAAAGAAAGAAGGGTCAGCCGCGGGGGTTTATAGAGGGTTTAGAGGAACCCGCGAAATGTCCTTCCTGCCACCTCCCCATCAATCAACCGACTACGCAAACACAATGCT
TCGTAACAAGATTGCTCATACTTTACTCCGTCGATCTCCAATCGCCGCCGTTTCCTCTCCACTCTCCTCCCTCGGAGCACCCTCGTCTACAGTCTTTGCCTCTGAACCAA
CGCCTTCTCAAACTACTTGCTCCTCTTTCTCCTGTCGCCACCACGCGTTCCCCTTTTCCCTGCGGTTGTTCGATACCAATTCCTCTAAACACTTTCGAGATGAAGTCAAA
GAACAAAATCCTCCTCAGTATGGGAGGGAAGATGAGGGAGAAACCACGGATGGATGGGAAGAAGACGATGATGATCTGGAGCCTGAGCTTGGTGATGGAGGGGATGGTGG
TGGTGTCGTTTTACAAGGCGTGCCATGGGGTGAGCATGTTCTTCTTCTTGCTCAAGAGGTCCTGCTGCAATTTGGCGATGACATAAAACTGTATTCTTTCAAGGTCACTC
CACGTGGGTACATTTATGTCAGATTAGATAAACTCTCACACGAATTTGGTTGTCCCAACCTGGAGGAGCTTGATAGTTATAGCAAAGAGTACAAAAAGAGATTAGATGAA
ACTGGAGCACTTGGAAATATTCCCGATGATTTAGCCCTGGAGGTATCGTCTCCAGGTGCAGAGAGATTACTGAAGGTTCCAGATGATCTGCTTAGATTTAAAGCCACGCC
AATGCGAGTTTCTTACATTGAAGATGTAGACTCGAGAGGCTCTGAAAATGATGGAGTTTTTATGTTGGATCATTTAGAATTGGAATCTGAAAGTTGTATCTGGAAATTGG
CAAATGTGAGGGAAAACCGAGATCCTTTAAGTAAGGGCAGGCCTTTGACTCGTAAGCAGAAAGAATGGAGGTTAAAGTTACCCTATGCAAATCATAAGAAGGTATTCCTT
TACCTTAAATGCTGA
Protein sequenceShow/hide protein sequence
MSFLPPPHQSTDYANTMLRNKIAHTLLRRSPIAAVSSPLSSLGAPSSTVFASEPTPSQTTCSSFSCRHHAFPFSLRLFDTNSSKHFRDEVKEQNPPQYGREDEGETTDGW
EEDDDDLEPELGDGGDGGGVVLQGVPWGEHVLLLAQEVLLQFGDDIKLYSFKVTPRGYIYVRLDKLSHEFGCPNLEELDSYSKEYKKRLDETGALGNIPDDLALEVSSPG
AERLLKVPDDLLRFKATPMRVSYIEDVDSRGSENDGVFMLDHLELESESCIWKLANVRENRDPLSKGRPLTRKQKEWRLKLPYANHKKVFLYLKC