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CSPI05G24470 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G24470
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr5:24084889..24086250
RNA-Seq ExpressionCSPI05G24470
SyntenyCSPI05G24470
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034486.1 putative root meristem growth factor 8 [Cucumis melo var. makuwa]1.2e-5187.79Show/hide
Query:  MGLIVMAILCCVSILVLLIPSASSHALDQSSPLQATEGVHSP-LVLGRKFKMLEEAARVDKKVEAQGFQVAKQKDNHKENVSGQEEQGTKLKKGKGRKWV
        MGLIVMAILCCVSIL+LLIPSASSHALDQSSPLQATE VHSP LVLGRKFKML+EAAR+DK+VE QGFQVAKQ DNHKENVSG+EE+G KL K KGRK V
Subjt:  MGLIVMAILCCVSILVLLIPSASSHALDQSSPLQATEGVHSP-LVLGRKFKMLEEAARVDKKVEAQGFQVAKQKDNHKENVSGQEEQGTKLKKGKGRKWV

Query:  KVADMSSQIFTMDYAHLKRRRPVHNMSLKRP
         VADMSSQIFTMDYAHLKRRRPVHNMSL RP
Subjt:  KVADMSSQIFTMDYAHLKRRRPVHNMSLKRP

KAE8648772.1 hypothetical protein Csa_008620 [Cucumis sativus]5.9e-5999.2Show/hide
Query:  MAILCCVSILVLLIPSASSHALDQSSPLQATEGVHSPLVLGRKFKMLEEAARVDKKVEAQGFQVAKQKDNHKENVSGQEEQGTKLKKGKGRKWVKVADMS
        MAILCCVSILVLLIPSASSHALDQSSPLQATEGVHSPLVLGRKFKMLEEAARVDKKVEAQGFQVAKQKDNHKENVSGQEEQGTKL KGKGRKWVKVADMS
Subjt:  MAILCCVSILVLLIPSASSHALDQSSPLQATEGVHSPLVLGRKFKMLEEAARVDKKVEAQGFQVAKQKDNHKENVSGQEEQGTKLKKGKGRKWVKVADMS

Query:  SQIFTMDYAHLKRRRPVHNMSLKRP
        SQIFTMDYAHLKRRRPVHNMSLKRP
Subjt:  SQIFTMDYAHLKRRRPVHNMSLKRP

XP_022956442.1 uncharacterized protein LOC111458171 [Cucurbita moschata]3.7e-3771.76Show/hide
Query:  MGLIVMAILCCVSILVLLIPSASSHALDQSSPLQATEGVHSP-LVLGRKFKMLEEAARVDKKVEAQGFQVAKQKDNHKENVSGQEEQGTKLKKGKGRKWV
        MGLI+MA+LCCVS+L+L +P ASSHALDQSSPLQATE VHSP LVL RKFKMLEEA    K VEA GFQ +KQ+D  KE VSGQ  +  +  KGKGRKW 
Subjt:  MGLIVMAILCCVSILVLLIPSASSHALDQSSPLQATEGVHSP-LVLGRKFKMLEEAARVDKKVEAQGFQVAKQKDNHKENVSGQEEQGTKLKKGKGRKWV

Query:  KVADMSSQIFTMDYAHLKRRRPVHNMSLKRP
         VADMSS+ FTMDYAH+KRRRPVHNMS +RP
Subjt:  KVADMSSQIFTMDYAHLKRRRPVHNMSLKRP

XP_022977309.1 uncharacterized protein LOC111477668 [Cucurbita maxima]2.4e-3670.99Show/hide
Query:  MGLIVMAILCCVSILVLLIPSASSHALDQSSPLQATEGVHSP-LVLGRKFKMLEEAARVDKKVEAQGFQVAKQKDNHKENVSGQEEQGTKLKKGKGRKWV
        MGLI MA+LCCVS+L+L +P ASSHALDQSSPLQ TE VHSP LVL RKFKMLEEA    K VEA GFQ +KQ+D  KENVSGQ  +  +  KGKGRKW 
Subjt:  MGLIVMAILCCVSILVLLIPSASSHALDQSSPLQATEGVHSP-LVLGRKFKMLEEAARVDKKVEAQGFQVAKQKDNHKENVSGQEEQGTKLKKGKGRKWV

Query:  KVADMSSQIFTMDYAHLKRRRPVHNMSLKRP
         VADMSS+  TMDYAH+KRRRPVHNMS +RP
Subjt:  KVADMSSQIFTMDYAHLKRRRPVHNMSLKRP

XP_023525366.1 uncharacterized protein LOC111788986 isoform X1 [Cucurbita pepo subsp. pepo]5.9e-3570.45Show/hide
Query:  MGLIVMAILCCVSILVLLIPSASSHALDQSSPLQATE-GVHSP-LVLGRKFKMLEEAARVDKKVEAQGFQVAKQKDNHKENVSGQEEQGTKLKKGKGRKW
        MGLI+MA+LCCVS+L+L +P ASSHALDQSSPLQ TE  VHSP LVL RKFKMLEEA    K VEA GFQ +KQ+D  KENVSGQ  +  +  KGKGRKW
Subjt:  MGLIVMAILCCVSILVLLIPSASSHALDQSSPLQATE-GVHSP-LVLGRKFKMLEEAARVDKKVEAQGFQVAKQKDNHKENVSGQEEQGTKLKKGKGRKW

Query:  VKVADMSSQIFTMDYAHLKRRRPVHNMSLKRP
          V DMSS+ FTMDYAH+KRRRPVHNMS +RP
Subjt:  VKVADMSSQIFTMDYAHLKRRRPVHNMSLKRP

TrEMBL top hitse value%identityAlignment
A0A0A0KWA1 Uncharacterized protein1.8e-6199.23Show/hide
Query:  MGLIVMAILCCVSILVLLIPSASSHALDQSSPLQATEGVHSPLVLGRKFKMLEEAARVDKKVEAQGFQVAKQKDNHKENVSGQEEQGTKLKKGKGRKWVK
        MGLIVMAILCCVSILVLLIPSASSHALDQSSPLQATEGVHSPLVLGRKFKMLEEAARVDKKVEAQGFQVAKQKDNHKENVSGQEEQGTKL KGKGRKWVK
Subjt:  MGLIVMAILCCVSILVLLIPSASSHALDQSSPLQATEGVHSPLVLGRKFKMLEEAARVDKKVEAQGFQVAKQKDNHKENVSGQEEQGTKLKKGKGRKWVK

Query:  VADMSSQIFTMDYAHLKRRRPVHNMSLKRP
        VADMSSQIFTMDYAHLKRRRPVHNMSLKRP
Subjt:  VADMSSQIFTMDYAHLKRRRPVHNMSLKRP

A0A5D3CCI7 Putative root meristem growth factor 85.7e-5287.79Show/hide
Query:  MGLIVMAILCCVSILVLLIPSASSHALDQSSPLQATEGVHSP-LVLGRKFKMLEEAARVDKKVEAQGFQVAKQKDNHKENVSGQEEQGTKLKKGKGRKWV
        MGLIVMAILCCVSIL+LLIPSASSHALDQSSPLQATE VHSP LVLGRKFKML+EAAR+DK+VE QGFQVAKQ DNHKENVSG+EE+G KL K KGRK V
Subjt:  MGLIVMAILCCVSILVLLIPSASSHALDQSSPLQATEGVHSP-LVLGRKFKMLEEAARVDKKVEAQGFQVAKQKDNHKENVSGQEEQGTKLKKGKGRKWV

Query:  KVADMSSQIFTMDYAHLKRRRPVHNMSLKRP
         VADMSSQIFTMDYAHLKRRRPVHNMSL RP
Subjt:  KVADMSSQIFTMDYAHLKRRRPVHNMSLKRP

A0A6J1D6T9 uncharacterized protein LOC1110175713.4e-2859.7Show/hide
Query:  MGLIVMAILCCVSILVLLIPSASSHALDQSSPLQATEGVHSPLVLGRKFKMLEEAARVDKKVEAQGFQVAKQKDNHKENVSGQ----EEQGTKLKKGKGR
        MGLIVMA LCCVS+L+LLIP ASSHAL+QS  LQATE V       RKF+++EEA      V+A G  V  Q DNH++NVSGQ    E++G  L + KGR
Subjt:  MGLIVMAILCCVSILVLLIPSASSHALDQSSPLQATEGVHSPLVLGRKFKMLEEAARVDKKVEAQGFQVAKQKDNHKENVSGQ----EEQGTKLKKGKGR

Query:  KWVKVADMSSQIFTMDYAHLKRRRPVHNMSLKRP
        KW+ V DMSS+ FTMDY H +RRRPVHNMS +RP
Subjt:  KWVKVADMSSQIFTMDYAHLKRRRPVHNMSLKRP

A0A6J1GWC1 uncharacterized protein LOC1114581711.8e-3771.76Show/hide
Query:  MGLIVMAILCCVSILVLLIPSASSHALDQSSPLQATEGVHSP-LVLGRKFKMLEEAARVDKKVEAQGFQVAKQKDNHKENVSGQEEQGTKLKKGKGRKWV
        MGLI+MA+LCCVS+L+L +P ASSHALDQSSPLQATE VHSP LVL RKFKMLEEA    K VEA GFQ +KQ+D  KE VSGQ  +  +  KGKGRKW 
Subjt:  MGLIVMAILCCVSILVLLIPSASSHALDQSSPLQATEGVHSP-LVLGRKFKMLEEAARVDKKVEAQGFQVAKQKDNHKENVSGQEEQGTKLKKGKGRKWV

Query:  KVADMSSQIFTMDYAHLKRRRPVHNMSLKRP
         VADMSS+ FTMDYAH+KRRRPVHNMS +RP
Subjt:  KVADMSSQIFTMDYAHLKRRRPVHNMSLKRP

A0A6J1IR14 uncharacterized protein LOC1114776681.2e-3670.99Show/hide
Query:  MGLIVMAILCCVSILVLLIPSASSHALDQSSPLQATEGVHSP-LVLGRKFKMLEEAARVDKKVEAQGFQVAKQKDNHKENVSGQEEQGTKLKKGKGRKWV
        MGLI MA+LCCVS+L+L +P ASSHALDQSSPLQ TE VHSP LVL RKFKMLEEA    K VEA GFQ +KQ+D  KENVSGQ  +  +  KGKGRKW 
Subjt:  MGLIVMAILCCVSILVLLIPSASSHALDQSSPLQATEGVHSP-LVLGRKFKMLEEAARVDKKVEAQGFQVAKQKDNHKENVSGQEEQGTKLKKGKGRKWV

Query:  KVADMSSQIFTMDYAHLKRRRPVHNMSLKRP
         VADMSS+  TMDYAH+KRRRPVHNMS +RP
Subjt:  KVADMSSQIFTMDYAHLKRRRPVHNMSLKRP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTTGATAGTCATGGCCATACTTTGCTGTGTTTCTATCTTGGTTCTTTTGATACCTTCTGCTTCCTCACATGCTCTGGATCAGTCTTCTCCCCTGCAAGCAACTGA
AGGTGTGCATTCTCCTCTTGTTTTAGGAAGGAAGTTCAAAATGTTAGAAGAAGCTGCAAGAGTGGATAAGAAGGTTGAAGCTCAAGGATTCCAAGTTGCCAAACAAAAAG
ATAACCACAAGGAAAATGTTTCAGGTCAGGAGGAACAAGGAACGAAGTTAAAGAAAGGAAAGGGGAGAAAGTGGGTGAAAGTGGCCGACATGTCGTCGCAGATTTTCACA
ATGGACTATGCTCACCTAAAACGTCGTCGTCCTGTCCACAACATGTCGCTCAAGCGTCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTTGATAGTCATGGCCATACTTTGCTGTGTTTCTATCTTGGTTCTTTTGATACCTTCTGCTTCCTCACATGCTCTGGATCAGTCTTCTCCCCTGCAAGCAACTGA
AGGTGTGCATTCTCCTCTTGTTTTAGGAAGGAAGTTCAAAATGTTAGAAGAAGCTGCAAGAGTGGATAAGAAGGTTGAAGCTCAAGGATTCCAAGTTGCCAAACAAAAAG
ATAACCACAAGGAAAATGTTTCAGGTCAGGAGGAACAAGGAACGAAGTTAAAGAAAGGAAAGGGGAGAAAGTGGGTGAAAGTGGCCGACATGTCGTCGCAGATTTTCACA
ATGGACTATGCTCACCTAAAACGTCGTCGTCCTGTCCACAACATGTCGCTCAAGCGTCCTTGA
Protein sequenceShow/hide protein sequence
MGLIVMAILCCVSILVLLIPSASSHALDQSSPLQATEGVHSPLVLGRKFKMLEEAARVDKKVEAQGFQVAKQKDNHKENVSGQEEQGTKLKKGKGRKWVKVADMSSQIFT
MDYAHLKRRRPVHNMSLKRP