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CSPI05G25300 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G25300
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionCLAVATA3/ESR (CLE)-related protein 27
Genome locationChr5:24623224..24623832
RNA-Seq ExpressionCSPI05G25300
SyntenyCSPI05G25300
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR040274 - CLAVATA3/ESR (CLE)-related protein 27/43


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573960.1 CLAVATA3/ESR (CLE)-related protein 27, partial [Cucurbita argyrosperma subsp. sororia]6.4e-2769.09Show/hide
Query:  MFNRRITTSSSSSSTSAFAILILILWVSQIWV-CCHCQARASRIF-PPPPPPPPPHPADKSLSGEEKDNAKNDLLQKYFNGRAF-DRHRHDEGFEDSKRK
        M  RRI  SSS      FAILILILWVSQIWV CC  QARASRIF PPPPPPPPPH  DK+    +  N + +LLQKYF  RAF D HRH EGF DSKRK
Subjt:  MFNRRITTSSSSSSTSAFAILILILWVSQIWV-CCHCQARASRIF-PPPPPPPPPHPADKSLSGEEKDNAKNDLLQKYFNGRAF-DRHRHDEGFEDSKRK

Query:  IPSCPDPLHN
        IPSCPDPLHN
Subjt:  IPSCPDPLHN

KAG6601288.1 CLAVATA3/ESR (CLE)-related protein 43, partial [Cucurbita argyrosperma subsp. sororia]7.8e-3370.27Show/hide
Query:  MFNRRITTSSSSSSTSAFAILILILWVSQIWVCCHCQARASRIFPPPPPPPPPHPADKSLSGEEK----DNAKNDLLQKYFNGRAFDRHRHDEGFEDSKR
        M  RRI TSSSSS    FA+LI ILWVSQIWVC HCQARASRIF    PPPPPH AD +L+G++K     NA+ +LL+KYF G+AFDRHR DEGFEDSKR
Subjt:  MFNRRITTSSSSSSTSAFAILILILWVSQIWVCCHCQARASRIFPPPPPPPPPHPADKSLSGEEK----DNAKNDLLQKYFNGRAFDRHRHDEGFEDSKR

Query:  KIPSCPDPLHN
        +IPSCPDPLHN
Subjt:  KIPSCPDPLHN

KAG7032076.1 CLAVATA3/ESR (CLE)-related protein 43, partial [Cucurbita argyrosperma subsp. argyrosperma]7.8e-3370.27Show/hide
Query:  MFNRRITTSSSSSSTSAFAILILILWVSQIWVCCHCQARASRIFPPPPPPPPPHPADKSLSGEEK----DNAKNDLLQKYFNGRAFDRHRHDEGFEDSKR
        M  RRI TSSSSS    FA+LI ILWVSQIWVC HCQARASRIF    PPPPPH AD +L+G++K     NA+ +LL+KYF G+AFDRHR DEGFEDSKR
Subjt:  MFNRRITTSSSSSSTSAFAILILILWVSQIWVCCHCQARASRIFPPPPPPPPPHPADKSLSGEEK----DNAKNDLLQKYFNGRAFDRHRHDEGFEDSKR

Query:  KIPSCPDPLHN
        +IPSCPDPLHN
Subjt:  KIPSCPDPLHN

KGN52083.1 hypothetical protein Csa_008231 [Cucumis sativus]7.2e-55100Show/hide
Query:  MFNRRITTSSSSSSTSAFAILILILWVSQIWVCCHCQARASRIFPPPPPPPPPHPADKSLSGEEKDNAKNDLLQKYFNGRAFDRHRHDEGFEDSKRKIPS
        MFNRRITTSSSSSSTSAFAILILILWVSQIWVCCHCQARASRIFPPPPPPPPPHPADKSLSGEEKDNAKNDLLQKYFNGRAFDRHRHDEGFEDSKRKIPS
Subjt:  MFNRRITTSSSSSSTSAFAILILILWVSQIWVCCHCQARASRIFPPPPPPPPPHPADKSLSGEEKDNAKNDLLQKYFNGRAFDRHRHDEGFEDSKRKIPS

Query:  CPDPLHN
        CPDPLHN
Subjt:  CPDPLHN

XP_022150497.1 uncharacterized protein LOC111018633 [Momordica charantia]3.6e-2261.9Show/hide
Query:  MFNRRITTSSSSSSTSAFAILILILWVSQIWVCCHCQARASRIFPPPPPPPPPHPADKSLSGEEKDNA--KNDLLQKYFNGRAFDRHRHDEGFEDSKRKI
        M  RRI  ++ SSS S+FAILILILWVSQIWVCCHCQARASRI PPP            L+G+ K +A  KN+L+QKY  GRA DRH   EGFEDSKR++
Subjt:  MFNRRITTSSSSSSTSAFAILILILWVSQIWVCCHCQARASRIFPPPPPPPPPHPADKSLSGEEKDNA--KNDLLQKYFNGRAFDRHRHDEGFEDSKRKI

Query:  PSCPD
        PSC D
Subjt:  PSCPD

TrEMBL top hitse value%identityAlignment
A0A061E6F8 Clavata3/esr-related 43, putative1.6e-1244.9Show/hide
Query:  SSSSSTSAFAILILILWVSQIWVCCHCQARASRIFPPPPPPPPPHPADKSLSGEEKDNAKNDLLQKYFNGRAFDRHRHDEGFEDSKRKIPSCPDPLHN
        SS     +  +++LI++  QIWVCC C+A A RI P                G + +  K DL QKYFNGR+F  ++ D GFE+SKR++PSCPDPLHN
Subjt:  SSSSSTSAFAILILILWVSQIWVCCHCQARASRIFPPPPPPPPPHPADKSLSGEEKDNAKNDLLQKYFNGRAFDRHRHDEGFEDSKRKIPSCPDPLHN

A0A0A0KR66 Uncharacterized protein3.5e-55100Show/hide
Query:  MFNRRITTSSSSSSTSAFAILILILWVSQIWVCCHCQARASRIFPPPPPPPPPHPADKSLSGEEKDNAKNDLLQKYFNGRAFDRHRHDEGFEDSKRKIPS
        MFNRRITTSSSSSSTSAFAILILILWVSQIWVCCHCQARASRIFPPPPPPPPPHPADKSLSGEEKDNAKNDLLQKYFNGRAFDRHRHDEGFEDSKRKIPS
Subjt:  MFNRRITTSSSSSSTSAFAILILILWVSQIWVCCHCQARASRIFPPPPPPPPPHPADKSLSGEEKDNAKNDLLQKYFNGRAFDRHRHDEGFEDSKRKIPS

Query:  CPDPLHN
        CPDPLHN
Subjt:  CPDPLHN

A0A2C9UKL3 Uncharacterized protein2.1e-1241.49Show/hide
Query:  STSAFAILILILWVSQIWVCCHCQARASRIFPPPPPPPPPHPADKSLSGEEKDNAKNDLLQKYFNGRAFDRHRHDEGFEDSKRKIPSCPDPLHN
        S+S   +++ +++V QIWVC  C+A A RIF  P     P+   +++S  +  ++K DL  K+FNGR +  +   +GFE++KR++PSCPDPLHN
Subjt:  STSAFAILILILWVSQIWVCCHCQARASRIFPPPPPPPPPHPADKSLSGEEKDNAKNDLLQKYFNGRAFDRHRHDEGFEDSKRKIPSCPDPLHN

A0A438EC69 CLAVATA3/ESR (CLE)-related protein 272.8e-1244.21Show/hide
Query:  ILILILWVSQIWVCCHCQARASRIFPPPPPPPPPHPADKSLSGEEKD-------NAKNDLLQKYFNGRAFDRHRHDEGFEDSKRKIPSCPDPLHN
        +++LI+ +  IW+CC CQA A RIFP             +  GEEK         +  DL +K+FNGRAF  +R  +GF++SKR++PSCPDPLHN
Subjt:  ILILILWVSQIWVCCHCQARASRIFPPPPPPPPPHPADKSLSGEEKD-------NAKNDLLQKYFNGRAFDRHRHDEGFEDSKRKIPSCPDPLHN

A0A6J1DAV9 uncharacterized protein LOC1110186331.8e-2261.9Show/hide
Query:  MFNRRITTSSSSSSTSAFAILILILWVSQIWVCCHCQARASRIFPPPPPPPPPHPADKSLSGEEKDNA--KNDLLQKYFNGRAFDRHRHDEGFEDSKRKI
        M  RRI  ++ SSS S+FAILILILWVSQIWVCCHCQARASRI PPP            L+G+ K +A  KN+L+QKY  GRA DRH   EGFEDSKR++
Subjt:  MFNRRITTSSSSSSTSAFAILILILWVSQIWVCCHCQARASRIFPPPPPPPPPHPADKSLSGEEKDNA--KNDLLQKYFNGRAFDRHRHDEGFEDSKRKI

Query:  PSCPD
        PSC D
Subjt:  PSCPD

SwissProt top hitse value%identityAlignment
Q9LUA1 CLAVATA3/ESR (CLE)-related protein 271.6e-0433.67Show/hide
Query:  SSSTSAFAILILILWVSQIWVCCHCQARASRIFPPPPPPPPPHPADKSLSGEEKDNAKNDLLQKYFNGRAFDRHRH--DEGFEDSKRKIPSCPDPLHN
        SS T+   ++IL+ ++  ++ C + +  A RIFP  P            SG+ ++    DL++KYF    F        +G  +SKR +PSCPDPLHN
Subjt:  SSSTSAFAILILILWVSQIWVCCHCQARASRIFPPPPPPPPPHPADKSLSGEEKDNAKNDLLQKYFNGRAFDRHRH--DEGFEDSKRKIPSCPDPLHN

Arabidopsis top hitse value%identityAlignment
AT1G25425.1 CLAVATA3/ESR-RELATED 432.8e-0434.04Show/hide
Query:  FAILILILWVSQIWVCCHCQARASRIFPPPPPPPPPHPADKSLSGEEKDNAKND----LLQKYFNGRAFDRHRHDEGFEDSKRKIPSCPDPLHN
        F++ +L++ + QIW+      R  R    P         D++     K+  KN+    L Q+YF GR+F  +  +  FEDS R+IPS PD LHN
Subjt:  FAILILILWVSQIWVCCHCQARASRIFPPPPPPPPPHPADKSLSGEEKDNAKND----LLQKYFNGRAFDRHRHDEGFEDSKRKIPSCPDPLHN

AT3G25905.1 CLAVATA3/ESR-RELATED 271.1e-0533.67Show/hide
Query:  SSSTSAFAILILILWVSQIWVCCHCQARASRIFPPPPPPPPPHPADKSLSGEEKDNAKNDLLQKYFNGRAFDRHRH--DEGFEDSKRKIPSCPDPLHN
        SS T+   ++IL+ ++  ++ C + +  A RIFP  P            SG+ ++    DL++KYF    F        +G  +SKR +PSCPDPLHN
Subjt:  SSSTSAFAILILILWVSQIWVCCHCQARASRIFPPPPPPPPPHPADKSLSGEEKDNAKNDLLQKYFNGRAFDRHRH--DEGFEDSKRKIPSCPDPLHN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTAACAGAAGAATCACCACTTCCTCCTCCTCTTCCTCCACCTCTGCTTTTGCCATACTAATTTTGATCCTGTGGGTGTCACAGATTTGGGTTTGTTGTCACTGTCA
AGCTAGAGCATCACGGATTTTTCCTCCTCCTCCTCCTCCGCCGCCGCCGCATCCAGCGGATAAATCACTGTCTGGTGAAGAAAAAGACAACGCCAAAAATGATCTTCTCC
AAAAATACTTCAACGGCAGAGCCTTCGATCGTCACCGCCATGATGAAGGATTTGAAGACAGTAAACGGAAAATACCCAGTTGTCCAGATCCTCTTCATAATTAG
mRNA sequenceShow/hide mRNA sequence
TTTGCTCTTATATCTCTAACCTAAGCCTCAAATCCATTTCCATACACAATACAATTTCCTCTCTATTTCTTTTTTCTTTTTTTCTTTTTTTTATACCAATCTCAATTTAC
TATGACATTCATACACGTCCACCCAGATAGAGGACGGATTTGAGTGTTTTTGAAATATTTCAAGTTTCTTTTGTTTTTTTTTTTTTTTTTCTTTGTGGGTTTTTCTTCCG
GCCGCCGGCAAAGCCACCATGTTTAACAGAAGAATCACCACTTCCTCCTCCTCTTCCTCCACCTCTGCTTTTGCCATACTAATTTTGATCCTGTGGGTGTCACAGATTTG
GGTTTGTTGTCACTGTCAAGCTAGAGCATCACGGATTTTTCCTCCTCCTCCTCCTCCGCCGCCGCCGCATCCAGCGGATAAATCACTGTCTGGTGAAGAAAAAGACAACG
CCAAAAATGATCTTCTCCAAAAATACTTCAACGGCAGAGCCTTCGATCGTCACCGCCATGATGAAGGATTTGAAGACAGTAAACGGAAAATACCCAGTTGTCCAGATCCT
CTTCATAATTAGTAGGATTAATTATTCAATTTTACACTCTTTCCCGTCCAAAATACCCC
Protein sequenceShow/hide protein sequence
MFNRRITTSSSSSSTSAFAILILILWVSQIWVCCHCQARASRIFPPPPPPPPPHPADKSLSGEEKDNAKNDLLQKYFNGRAFDRHRHDEGFEDSKRKIPSCPDPLHN