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CSPI05G25350 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G25350
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionGlutamate receptor
Genome locationChr5:24662855..24663379
RNA-Seq ExpressionCSPI05G25350
SyntenyCSPI05G25350
Gene Ontology termsGO:0034220 - ion transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0015276 - ligand-gated ion channel activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064863.1 glutamate receptor 2.1-like isoform X1 [Cucumis melo var. makuwa]1.1e-2298.44Show/hide
Query:  AAAAAAVKVKVGVVLDLNVIVGKISLSCISMALADFYASRSYYKTRIILNPIDSNGSVIRAAAA
        AAAAAAVKVKVGVVLDLNVIVGK+SLSCISMALADFYASRSYYKTRIILNPIDSNGSVIRAAAA
Subjt:  AAAAAAVKVKVGVVLDLNVIVGKISLSCISMALADFYASRSYYKTRIILNPIDSNGSVIRAAAA

KGN63242.2 hypothetical protein Csa_022449 [Cucumis sativus]1.9e-2298.44Show/hide
Query:  AAAAAAVKVKVGVVLDLNVIVGKISLSCISMALADFYASRSYYKTRIILNPIDSNGSVIRAAAA
        AAAAAAVKVKVGVVLDLNVIVGKISLSCISMALADFYA RSYYKTRIILNPIDSNGSVIRAAAA
Subjt:  AAAAAAVKVKVGVVLDLNVIVGKISLSCISMALADFYASRSYYKTRIILNPIDSNGSVIRAAAA

XP_004138837.2 glutamate receptor 2.5 [Cucumis sativus]1.9e-2298.44Show/hide
Query:  AAAAAAVKVKVGVVLDLNVIVGKISLSCISMALADFYASRSYYKTRIILNPIDSNGSVIRAAAA
        AAAAAAVKVKVGVVLDLNVIVGKISLSCISMALADFYA RSYYKTRIILNPIDSNGSVIRAAAA
Subjt:  AAAAAAVKVKVGVVLDLNVIVGKISLSCISMALADFYASRSYYKTRIILNPIDSNGSVIRAAAA

XP_008445300.1 PREDICTED: glutamate receptor 2.1-like isoform X1 [Cucumis melo]1.1e-2298.44Show/hide
Query:  AAAAAAVKVKVGVVLDLNVIVGKISLSCISMALADFYASRSYYKTRIILNPIDSNGSVIRAAAA
        AAAAAAVKVKVGVVLDLNVIVGK+SLSCISMALADFYASRSYYKTRIILNPIDSNGSVIRAAAA
Subjt:  AAAAAAVKVKVGVVLDLNVIVGKISLSCISMALADFYASRSYYKTRIILNPIDSNGSVIRAAAA

XP_008445301.1 PREDICTED: glutamate receptor 2.8-like isoform X2 [Cucumis melo]1.1e-2298.44Show/hide
Query:  AAAAAAVKVKVGVVLDLNVIVGKISLSCISMALADFYASRSYYKTRIILNPIDSNGSVIRAAAA
        AAAAAAVKVKVGVVLDLNVIVGK+SLSCISMALADFYASRSYYKTRIILNPIDSNGSVIRAAAA
Subjt:  AAAAAAVKVKVGVVLDLNVIVGKISLSCISMALADFYASRSYYKTRIILNPIDSNGSVIRAAAA

TrEMBL top hitse value%identityAlignment
A0A0A0LPV9 PBPe domain-containing protein1.2e-1471.21Show/hide
Query:  QTAAAAAAVKVKVGVVLDLNVIVGKISLSCISMALADFYASRSYYKTRIILNPIDSNGSVIRAAAA
        +  A AA VKVKVG VLDLN   GK+ LSCISMALADFY+SRS YKTR+ILN IDSN +V+ AAAA
Subjt:  QTAAAAAAVKVKVGVVLDLNVIVGKISLSCISMALADFYASRSYYKTRIILNPIDSNGSVIRAAAA

A0A0A0LSQ2 ANF_receptor domain-containing protein9.2e-2398.44Show/hide
Query:  AAAAAAVKVKVGVVLDLNVIVGKISLSCISMALADFYASRSYYKTRIILNPIDSNGSVIRAAAA
        AAAAAAVKVKVGVVLDLNVIVGKISLSCISMALADFYA RSYYKTRIILNPIDSNGSVIRAAAA
Subjt:  AAAAAAVKVKVGVVLDLNVIVGKISLSCISMALADFYASRSYYKTRIILNPIDSNGSVIRAAAA

A0A1S3BBW2 Glutamate receptor5.4e-2398.44Show/hide
Query:  AAAAAAVKVKVGVVLDLNVIVGKISLSCISMALADFYASRSYYKTRIILNPIDSNGSVIRAAAA
        AAAAAAVKVKVGVVLDLNVIVGK+SLSCISMALADFYASRSYYKTRIILNPIDSNGSVIRAAAA
Subjt:  AAAAAAVKVKVGVVLDLNVIVGKISLSCISMALADFYASRSYYKTRIILNPIDSNGSVIRAAAA

A0A1S3BCC2 Glutamate receptor5.4e-2398.44Show/hide
Query:  AAAAAAVKVKVGVVLDLNVIVGKISLSCISMALADFYASRSYYKTRIILNPIDSNGSVIRAAAA
        AAAAAAVKVKVGVVLDLNVIVGK+SLSCISMALADFYASRSYYKTRIILNPIDSNGSVIRAAAA
Subjt:  AAAAAAVKVKVGVVLDLNVIVGKISLSCISMALADFYASRSYYKTRIILNPIDSNGSVIRAAAA

A0A5A7V9M7 Glutamate receptor5.4e-2398.44Show/hide
Query:  AAAAAAVKVKVGVVLDLNVIVGKISLSCISMALADFYASRSYYKTRIILNPIDSNGSVIRAAAA
        AAAAAAVKVKVGVVLDLNVIVGK+SLSCISMALADFYASRSYYKTRIILNPIDSNGSVIRAAAA
Subjt:  AAAAAAVKVKVGVVLDLNVIVGKISLSCISMALADFYASRSYYKTRIILNPIDSNGSVIRAAAA

SwissProt top hitse value%identityAlignment
O81078 Glutamate receptor 2.92.0e-0649.12Show/hide
Query:  KVKVGVVLDLNVIVGKISLSCISMALADFYASRSYYKTRIILNPIDSNGSVIRAAAA
        ++KVGVVLDLN    KI L+ I MA++DFYA    Y TR+ L+  DS    ++A+AA
Subjt:  KVKVGVVLDLNVIVGKISLSCISMALADFYASRSYYKTRIILNPIDSNGSVIRAAAA

Q9C5V5 Glutamate receptor 2.82.0e-0647.37Show/hide
Query:  KVKVGVVLDLNVIVGKISLSCISMALADFYASRSYYKTRIILNPIDSNGSVIRAAAA
        ++KVGVVLDLN    KI L+ I++AL+DFY     Y+TR+ L+  DS    ++A+AA
Subjt:  KVKVGVVLDLNVIVGKISLSCISMALADFYASRSYYKTRIILNPIDSNGSVIRAAAA

Q9LFN5 Glutamate receptor 2.56.8e-0747.46Show/hide
Query:  AVKVKVGVVLDLNVIVGKISLSCISMALADFYASRSYYKTRIILNPIDSNGSVIRAAAA
        A++VKVG+VL  NV +  +SL  I+M+L++FY + + +KTRI+LN  DS  +V+ AAA+
Subjt:  AVKVKVGVVLDLNVIVGKISLSCISMALADFYASRSYYKTRIILNPIDSNGSVIRAAAA

Q9LFN8 Glutamate receptor 2.62.0e-0644.83Show/hide
Query:  VKVKVGVVLDLNVIVGKISLSCISMALADFYASRSYYKTRIILNPIDSNGSVIRAAAA
        ++V+VG+VLD N  +  +SL  I+M+L++FY + + +KTRI+LN  DS  +V+ AAA+
Subjt:  VKVKVGVVLDLNVIVGKISLSCISMALADFYASRSYYKTRIILNPIDSNGSVIRAAAA

Q9SHV1 Glutamate receptor 2.25.8e-0642.11Show/hide
Query:  KVKVGVVLDLNVIVGKISLSCISMALADFYASRSYYKTRIILNPIDSNGSVIRAAAA
        +V +GVV D+      +++ CI+M+LADFY+SR  ++TR+++N  DS   V+ AA A
Subjt:  KVKVGVVLDLNVIVGKISLSCISMALADFYASRSYYKTRIILNPIDSNGSVIRAAAA

Arabidopsis top hitse value%identityAlignment
AT2G24720.1 glutamate receptor 2.24.1e-0742.11Show/hide
Query:  KVKVGVVLDLNVIVGKISLSCISMALADFYASRSYYKTRIILNPIDSNGSVIRAAAA
        +V +GVV D+      +++ CI+M+LADFY+SR  ++TR+++N  DS   V+ AA A
Subjt:  KVKVGVVLDLNVIVGKISLSCISMALADFYASRSYYKTRIILNPIDSNGSVIRAAAA

AT2G29100.1 glutamate receptor 2.91.4e-0749.12Show/hide
Query:  KVKVGVVLDLNVIVGKISLSCISMALADFYASRSYYKTRIILNPIDSNGSVIRAAAA
        ++KVGVVLDLN    KI L+ I MA++DFYA    Y TR+ L+  DS    ++A+AA
Subjt:  KVKVGVVLDLNVIVGKISLSCISMALADFYASRSYYKTRIILNPIDSNGSVIRAAAA

AT2G29110.1 glutamate receptor 2.81.4e-0747.37Show/hide
Query:  KVKVGVVLDLNVIVGKISLSCISMALADFYASRSYYKTRIILNPIDSNGSVIRAAAA
        ++KVGVVLDLN    KI L+ I++AL+DFY     Y+TR+ L+  DS    ++A+AA
Subjt:  KVKVGVVLDLNVIVGKISLSCISMALADFYASRSYYKTRIILNPIDSNGSVIRAAAA

AT5G11180.1 glutamate receptor 2.61.4e-0744.83Show/hide
Query:  VKVKVGVVLDLNVIVGKISLSCISMALADFYASRSYYKTRIILNPIDSNGSVIRAAAA
        ++V+VG+VLD N  +  +SL  I+M+L++FY + + +KTRI+LN  DS  +V+ AAA+
Subjt:  VKVKVGVVLDLNVIVGKISLSCISMALADFYASRSYYKTRIILNPIDSNGSVIRAAAA

AT5G48400.1 Glutamate receptor family protein5.4e-0749.09Show/hide
Query:  VKVKVGVVLDLNVIVGKISLSCISMALADFYASRSYYKTRIILNPIDSNGSVIRA
        ++V+VG+VLDL  + GKI  S +SMAL+DFY + + YKTR+ L   DS+G  + A
Subjt:  VKVKVGVVLDLNVIVGKISLSCISMALADFYASRSYYKTRIILNPIDSNGSVIRA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCGTTGTCGTTCAAATTTCTCTCCGACAAGGAGGGTTTGGCAGACGGCAGCGGCAGCGGCAGCGGTGAAAGTGAAGGTGGGTGTGGTTTTGGATTTGAATGTTAT
TGTTGGGAAAATTAGTTTGAGTTGCATTTCAATGGCTCTTGCTGATTTCTATGCTTCTCGGAGTTATTATAAGACCAGAATCATCCTTAATCCCATTGATTCCAATGGCT
CTGTTATTCGTGCAGCTGCTGCAGACGAGAATGGTTGTGGATTAAGAGAGGAGAAGGGCGAGGGCCATTGA
mRNA sequenceShow/hide mRNA sequence
CTTTAAGAAAGTCCATGAAAGAAGGGGATAAGGAGGAGCTAAGGAAAGCAGGGGAGGAAAACGGCGTCGTAACATCATGAGAAGAATATTTAAGAACAGAACAATTACTC
TGTTTTTCATTAATATCCTCCTCCGTCGTCACACCCGACGATGAATCGTTGTCGTTCAAATTTCTCTCCGACAAGGAGGGTTTGGCAGACGGCAGCGGCAGCGGCAGCGG
TGAAAGTGAAGGTGGGTGTGGTTTTGGATTTGAATGTTATTGTTGGGAAAATTAGTTTGAGTTGCATTTCAATGGCTCTTGCTGATTTCTATGCTTCTCGGAGTTATTAT
AAGACCAGAATCATCCTTAATCCCATTGATTCCAATGGCTCTGTTATTCGTGCAGCTGCTGCAGACGAGAATGGTTGTGGATTAAGAGAGGAGAAGGGCGAGGGCCATTG
A
Protein sequenceShow/hide protein sequence
MNRCRSNFSPTRRVWQTAAAAAAVKVKVGVVLDLNVIVGKISLSCISMALADFYASRSYYKTRIILNPIDSNGSVIRAAAADENGCGLREEKGEGH