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CSPI05G25500 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G25500
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionF-box domain-containing protein
Genome locationChr5:24746602..24747357
RNA-Seq ExpressionCSPI05G25500
SyntenyCSPI05G25500
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034579.1 hypothetical protein E6C27_scaffold65G005950 [Cucumis melo var. makuwa]5.2e-5683.82Show/hide
Query:  ETRIESSGDGVAAIPPPSSAHAKFFTSPIVDFSDCILIQGSPLIFFLAGELLTSHFVHPQILRFVISLPSVSFYLGLSASDDFKSWVLRSDSFAAFSRVF
        ETRIE SG GVAAIPPPSSAHAKFFTSPIVD SDCILIQG PLIF LA +LLTSHFV PQILRFV SLPSVS YLGLSAS DF SWVL++DSFA FSRV 
Subjt:  ETRIESSGDGVAAIPPPSSAHAKFFTSPIVDFSDCILIQGSPLIFFLAGELLTSHFVHPQILRFVISLPSVSFYLGLSASDDFKSWVLRSDSFAAFSRVF

Query:  LPSDQLGFISCMGYCIVLAGRMKYWGFGFSELVQYL
        LP DQL FISCMGYCIVL GRMKYWGFGFS+L QY+
Subjt:  LPSDQLGFISCMGYCIVLAGRMKYWGFGFSELVQYL
TrEMBL top hitse value%identityAlignment
A0A0A0KT87 F-box domain-containing protein2.6e-53100Show/hide
Query:  MLITHKSLFGSLFLTPSLFIGIGPVEVARMDSSCRKDEEDGHCGETRIESSGDGVAAIPPPSSAHAKFFTSPIVDFSDCILIQGSPLIFFLAGELLTSHF
        MLITHKSLFGSLFLTPSLFIGIGPVEVARMDSSCRKDEEDGHCGETRIESSGDGVAAIPPPSSAHAKFFTSPIVDFSDCILIQGSPLIFFLAGELLTSHF
Subjt:  MLITHKSLFGSLFLTPSLFIGIGPVEVARMDSSCRKDEEDGHCGETRIESSGDGVAAIPPPSSAHAKFFTSPIVDFSDCILIQGSPLIFFLAGELLTSHF

Query:  VHPQILR
        VHPQILR
Subjt:  VHPQILR
A0A5D3CBC5 Uncharacterized protein2.5e-5683.82Show/hide
Query:  ETRIESSGDGVAAIPPPSSAHAKFFTSPIVDFSDCILIQGSPLIFFLAGELLTSHFVHPQILRFVISLPSVSFYLGLSASDDFKSWVLRSDSFAAFSRVF
        ETRIE SG GVAAIPPPSSAHAKFFTSPIVD SDCILIQG PLIF LA +LLTSHFV PQILRFV SLPSVS YLGLSAS DF SWVL++DSFA FSRV 
Subjt:  ETRIESSGDGVAAIPPPSSAHAKFFTSPIVDFSDCILIQGSPLIFFLAGELLTSHFVHPQILRFVISLPSVSFYLGLSASDDFKSWVLRSDSFAAFSRVF

Query:  LPSDQLGFISCMGYCIVLAGRMKYWGFGFSELVQYL
        LP DQL FISCMGYCIVL GRMKYWGFGFS+L QY+
Subjt:  LPSDQLGFISCMGYCIVLAGRMKYWGFGFSELVQYL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGATCACTCACAAGTCACTCTTTGGCTCTCTTTTTCTCACACCCTCTCTCTTCATCGGAATTGGTCCCGTCGAAGTTGCTCGTATGGACTCATCTTGCCGAAAAGA
TGAGGAGGATGGACACTGTGGAGAGACAAGAATCGAGTCCAGTGGGGACGGGGTTGCGGCTATTCCGCCTCCAAGTTCTGCTCATGCAAAATTCTTCACCTCACCGATCG
TCGATTTCTCAGACTGTATTCTCATTCAAGGCTCACCCCTCATATTTTTTCTCGCTGGGGAACTGCTGACTTCCCACTTCGTTCACCCCCAAATCCTTAGGTTTGTGATT
TCTCTTCCCTCCGTCTCATTCTACTTGGGTCTTTCTGCATCTGACGATTTCAAGTCATGGGTCTTGCGAAGCGATTCATTTGCTGCGTTTTCACGTGTCTTTCTTCCATC
TGATCAATTGGGTTTTATTTCTTGTATGGGATATTGTATAGTTTTAGCGGGGAGAATGAAGTACTGGGGATTTGGTTTTAGTGAACTCGTGCAGTATTTGCTCCATCTGT
CTTCACTCGTTCTTCCACTCTATCTATAG
mRNA sequenceShow/hide mRNA sequence
ATGTTGATCACTCACAAGTCACTCTTTGGCTCTCTTTTTCTCACACCCTCTCTCTTCATCGGAATTGGTCCCGTCGAAGTTGCTCGTATGGACTCATCTTGCCGAAAAGA
TGAGGAGGATGGACACTGTGGAGAGACAAGAATCGAGTCCAGTGGGGACGGGGTTGCGGCTATTCCGCCTCCAAGTTCTGCTCATGCAAAATTCTTCACCTCACCGATCG
TCGATTTCTCAGACTGTATTCTCATTCAAGGCTCACCCCTCATATTTTTTCTCGCTGGGGAACTGCTGACTTCCCACTTCGTTCACCCCCAAATCCTTAGGTTTGTGATT
TCTCTTCCCTCCGTCTCATTCTACTTGGGTCTTTCTGCATCTGACGATTTCAAGTCATGGGTCTTGCGAAGCGATTCATTTGCTGCGTTTTCACGTGTCTTTCTTCCATC
TGATCAATTGGGTTTTATTTCTTGTATGGGATATTGTATAGTTTTAGCGGGGAGAATGAAGTACTGGGGATTTGGTTTTAGTGAACTCGTGCAGTATTTGCTCCATCTGT
CTTCACTCGTTCTTCCACTCTATCTATAG
Protein sequenceShow/hide protein sequence
MLITHKSLFGSLFLTPSLFIGIGPVEVARMDSSCRKDEEDGHCGETRIESSGDGVAAIPPPSSAHAKFFTSPIVDFSDCILIQGSPLIFFLAGELLTSHFVHPQILRFVI
SLPSVSFYLGLSASDDFKSWVLRSDSFAAFSRVFLPSDQLGFISCMGYCIVLAGRMKYWGFGFSELVQYLLHLSSLVLPLYL