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CSPI05G26080 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G26080
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionNuclear pore complex protein NUP1 isoform X1
Genome locationChr5:25090441..25090973
RNA-Seq ExpressionCSPI05G26080
SyntenyCSPI05G26080
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK09186.1 nuclear pore complex protein NUP1 isoform X1 [Cucumis melo var. makuwa]1.3e-3275.23Show/hide
Query:  MVTARQQKN---LEEEDEEGLGRVRKLVDERFVKKSPPKPYDRPPDGIRTSGNNSWILKLVDPGQRLI--------SSVIRKFPHHLTSRVSSQESSQSR
        MVTARQQKN    EE++EE LG V K +DERFVKKSP KPYDRPP+GIRT+GNNSWILKLVDP QRLI        SSVIR FP HLTSRVSSQESSQSR
Subjt:  MVTARQQKN---LEEEDEEGLGRVRKLVDERFVKKSPPKPYDRPPDGIRTSGNNSWILKLVDPGQRLI--------SSVIRKFPHHLTSRVSSQESSQSR

Query:  KDDNKVDVT
        KDD K DVT
Subjt:  KDDNKVDVT

XP_008446727.1 PREDICTED: nuclear pore complex protein NUP1 isoform X1 [Cucumis melo]1.3e-3275.23Show/hide
Query:  MVTARQQKN---LEEEDEEGLGRVRKLVDERFVKKSPPKPYDRPPDGIRTSGNNSWILKLVDPGQRLI--------SSVIRKFPHHLTSRVSSQESSQSR
        MVTARQQKN    EE++EE LG V K +DERFVKKSP KPYDRPP+GIRT+GNNSWILKLVDP QRLI        SSVIR FP HLTSRVSSQESSQSR
Subjt:  MVTARQQKN---LEEEDEEGLGRVRKLVDERFVKKSPPKPYDRPPDGIRTSGNNSWILKLVDPGQRLI--------SSVIRKFPHHLTSRVSSQESSQSR

Query:  KDDNKVDVT
        KDD K DVT
Subjt:  KDDNKVDVT

XP_011656263.1 nuclear pore complex protein NUP1 [Cucumis sativus]4.1e-4491.51Show/hide
Query:  MVTARQQKNLEEEDEEGLGRVRKLVDERFVKKSPPKPYDRPPDGIRTSGNNSWILKLVDPGQRLI--------SSVIRKFPHHLTSRVSSQESSQSRKDD
        MVTARQQKNLEEEDEEGLGRVRKL+DERFVKKSPPKPYDRPPDGIRTSGNNSWILKLVDPGQRLI        SSVIRKFPHHLTSRVSSQESSQSRKDD
Subjt:  MVTARQQKNLEEEDEEGLGRVRKLVDERFVKKSPPKPYDRPPDGIRTSGNNSWILKLVDPGQRLI--------SSVIRKFPHHLTSRVSSQESSQSRKDD

Query:  NKVDVT
        NKVDVT
Subjt:  NKVDVT

XP_038893389.1 nuclear pore complex protein NUP1-like isoform X1 [Benincasa hispida]8.7e-2668.57Show/hide
Query:  MVTARQQKNLEEEDEEGLGRVRKLVDERFVKKSPPKPYDRPPDGIRTSGNNSWILKLVDPGQRLI--------SSVIRKFPHHLTSRVSSQESSQSRKDD
        M TAR+QK+  E  +EGL  V K  DERFV+K P KPYDRP   +RTSGNNSWILKLVDP QRLI        SSVIR FPHHLTSRVSSQESSQSRKDD
Subjt:  MVTARQQKNLEEEDEEGLGRVRKLVDERFVKKSPPKPYDRPPDGIRTSGNNSWILKLVDPGQRLI--------SSVIRKFPHHLTSRVSSQESSQSRKDD

Query:  NKVDV
         K +V
Subjt:  NKVDV

XP_038893390.1 nuclear pore complex protein NUP1-like isoform X2 [Benincasa hispida]8.7e-2668.57Show/hide
Query:  MVTARQQKNLEEEDEEGLGRVRKLVDERFVKKSPPKPYDRPPDGIRTSGNNSWILKLVDPGQRLI--------SSVIRKFPHHLTSRVSSQESSQSRKDD
        M TAR+QK+  E  +EGL  V K  DERFV+K P KPYDRP   +RTSGNNSWILKLVDP QRLI        SSVIR FPHHLTSRVSSQESSQSRKDD
Subjt:  MVTARQQKNLEEEDEEGLGRVRKLVDERFVKKSPPKPYDRPPDGIRTSGNNSWILKLVDPGQRLI--------SSVIRKFPHHLTSRVSSQESSQSRKDD

Query:  NKVDV
         K +V
Subjt:  NKVDV

TrEMBL top hitse value%identityAlignment
A0A0A0KRB2 Uncharacterized protein6.2e-4691.74Show/hide
Query:  MVTARQQKNLEEEDEEGLGRVRKLVDERFVKKSPPKPYDRPPDGIRTSGNNSWILKLVDPGQRLI--------SSVIRKFPHHLTSRVSSQESSQSRKDD
        MVTARQQKNLEEEDEEGLGRVRKL+DERFVKKSPPKPYDRPPDGIRTSGNNSWILKLVDPGQRLI        SSVIRKFPHHLTSRVSSQESSQSRKDD
Subjt:  MVTARQQKNLEEEDEEGLGRVRKLVDERFVKKSPPKPYDRPPDGIRTSGNNSWILKLVDPGQRLI--------SSVIRKFPHHLTSRVSSQESSQSRKDD

Query:  NKVDVTVSR
        NKVDVTVSR
Subjt:  NKVDVTVSR

A0A1S3BFS9 nuclear pore complex protein NUP1 isoform X16.1e-3375.23Show/hide
Query:  MVTARQQKN---LEEEDEEGLGRVRKLVDERFVKKSPPKPYDRPPDGIRTSGNNSWILKLVDPGQRLI--------SSVIRKFPHHLTSRVSSQESSQSR
        MVTARQQKN    EE++EE LG V K +DERFVKKSP KPYDRPP+GIRT+GNNSWILKLVDP QRLI        SSVIR FP HLTSRVSSQESSQSR
Subjt:  MVTARQQKN---LEEEDEEGLGRVRKLVDERFVKKSPPKPYDRPPDGIRTSGNNSWILKLVDPGQRLI--------SSVIRKFPHHLTSRVSSQESSQSR

Query:  KDDNKVDVT
        KDD K DVT
Subjt:  KDDNKVDVT

A0A5A7SZK9 Nuclear pore complex protein NUP1 isoform X16.1e-3375.23Show/hide
Query:  MVTARQQKN---LEEEDEEGLGRVRKLVDERFVKKSPPKPYDRPPDGIRTSGNNSWILKLVDPGQRLI--------SSVIRKFPHHLTSRVSSQESSQSR
        MVTARQQKN    EE++EE LG V K +DERFVKKSP KPYDRPP+GIRT+GNNSWILKLVDP QRLI        SSVIR FP HLTSRVSSQESSQSR
Subjt:  MVTARQQKN---LEEEDEEGLGRVRKLVDERFVKKSPPKPYDRPPDGIRTSGNNSWILKLVDPGQRLI--------SSVIRKFPHHLTSRVSSQESSQSR

Query:  KDDNKVDVT
        KDD K DVT
Subjt:  KDDNKVDVT

A0A5D3CFP1 Nuclear pore complex protein NUP1 isoform X16.1e-3375.23Show/hide
Query:  MVTARQQKN---LEEEDEEGLGRVRKLVDERFVKKSPPKPYDRPPDGIRTSGNNSWILKLVDPGQRLI--------SSVIRKFPHHLTSRVSSQESSQSR
        MVTARQQKN    EE++EE LG V K +DERFVKKSP KPYDRPP+GIRT+GNNSWILKLVDP QRLI        SSVIR FP HLTSRVSSQESSQSR
Subjt:  MVTARQQKN---LEEEDEEGLGRVRKLVDERFVKKSPPKPYDRPPDGIRTSGNNSWILKLVDPGQRLI--------SSVIRKFPHHLTSRVSSQESSQSR

Query:  KDDNKVDVT
        KDD K DVT
Subjt:  KDDNKVDVT

A0A6J1GZB0 nuclear pore complex protein NUP1-like isoform X21.4e-2462.04Show/hide
Query:  MVTARQQKNLEEEDEEGLGRVRKLVDERFVKKSPPKPYDRPPDGIRTSGNNSWILKLVDPGQRLI--------SSVIRKFPHHLTSRVSSQESSQSRKDD
        M TAR++K+ E   EEGL    K  D+RF +K P KPYDRPP  +RTSGNNSWILKLVDP QRLI        SSV R FPH L SR SS ESSQSR+DD
Subjt:  MVTARQQKNLEEEDEEGLGRVRKLVDERFVKKSPPKPYDRPPDGIRTSGNNSWILKLVDPGQRLI--------SSVIRKFPHHLTSRVSSQESSQSRKDD

Query:  NKVDVTVS
         K DVTV+
Subjt:  NKVDVTVS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGACTGCGAGGCAACAGAAAAACCTTGAAGAAGAAGATGAAGAAGGGTTGGGAAGGGTTAGGAAGTTAGTAGATGAAAGATTCGTTAAGAAATCACCGCCGAAACC
TTATGATCGGCCGCCAGATGGCATAAGAACGTCTGGAAACAATTCGTGGATCTTGAAGCTCGTTGATCCAGGTCAAAGGCTCATTTCCTCCGTGATCCGAAAATTTCCTC
ACCATTTAACGTCTCGTGTTTCGTCTCAAGAATCAAGCCAGTCAAGAAAGGATGACAACAAGGTCGATGTAACAGTAAGTAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGACTGCGAGGCAACAGAAAAACCTTGAAGAAGAAGATGAAGAAGGGTTGGGAAGGGTTAGGAAGTTAGTAGATGAAAGATTCGTTAAGAAATCACCGCCGAAACC
TTATGATCGGCCGCCAGATGGCATAAGAACGTCTGGAAACAATTCGTGGATCTTGAAGCTCGTTGATCCAGGTCAAAGGCTCATTTCCTCCGTGATCCGAAAATTTCCTC
ACCATTTAACGTCTCGTGTTTCGTCTCAAGAATCAAGCCAGTCAAGAAAGGATGACAACAAGGTCGATGTAACAGTAAGTAGATGA
Protein sequenceShow/hide protein sequence
MVTARQQKNLEEEDEEGLGRVRKLVDERFVKKSPPKPYDRPPDGIRTSGNNSWILKLVDPGQRLISSVIRKFPHHLTSRVSSQESSQSRKDDNKVDVTVSR