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CSPI05G26260 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G26260
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionglycine-rich RNA-binding protein GRP1A-like
Genome locationChr5:25187706..25191172
RNA-Seq ExpressionCSPI05G26260
SyntenyCSPI05G26260
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008446752.1 PREDICTED: uncharacterized protein LOC103489382 [Cucumis melo]5.6e-5684.42Show/hide
Query:  RRGIRLIFLLFCSTLAISSAALQQQIFPTATESNYQQKTYTKKHGKYGVTNQINRRYSSSAITVSNVIRRGSGSGSGGGGGSGSAAAAGGGEN-GGSRPR
        RRGIRLIFLLFCSTLAISSAALQQQIFPTATESNYQQKTYT+K GKYGVTNQI+RRYS+SAITVSNVIRR           +G AAAAGGGEN GGSRP 
Subjt:  RRGIRLIFLLFCSTLAISSAALQQQIFPTATESNYQQKTYTKKHGKYGVTNQINRRYSSSAITVSNVIRRGSGSGSGGGGGSGSAAAAGGGEN-GGSRPR

Query:  TGGGTAVIPVYAAGSAQAHHRQGRAHNAGNSYENNMGLLVAAVLAAIAHLCRVF
        TGGGTAVIPVYAAGSAQA HRQGR HNAGN YENN GLLVAAVLAAIAHLCRV+
Subjt:  TGGGTAVIPVYAAGSAQAHHRQGRAHNAGNSYENNMGLLVAAVLAAIAHLCRVF

XP_011655831.2 glycine-rich protein DOT1 [Cucumis sativus]2.7e-7198.73Show/hide
Query:  MGRRRGIRLIFLLFCSTLAISSAALQQQIFPTATESNYQQKTYTKKHGKYGVTNQINRRYSSSAITVSNVIRR--GSGSGSGGGGGSGSAAAAGGGENGG
        MGRRRGIRLIFLLFCSTLAISSAALQQQIFPTATESNYQQKTYTKKHGKYGVTNQINRRYSSSAITVSNVIRR  GSGSGSGGGGGSGSAAAAGGGENGG
Subjt:  MGRRRGIRLIFLLFCSTLAISSAALQQQIFPTATESNYQQKTYTKKHGKYGVTNQINRRYSSSAITVSNVIRR--GSGSGSGGGGGSGSAAAAGGGENGG

Query:  SRPRTGGGTAVIPVYAAGSAQAHHRQGRAHNAGNSYENNMGLLVAAVLAAIAHLCRVF
        SRPRTGGGTAVIPVYAAGSAQAHHRQGRAHNAGNSYENNMGLLVAAVLAAIAHLCRVF
Subjt:  SRPRTGGGTAVIPVYAAGSAQAHHRQGRAHNAGNSYENNMGLLVAAVLAAIAHLCRVF

XP_022957462.1 glycine-rich RNA-binding protein GRP1A-like [Cucurbita moschata]4.9e-3665.19Show/hide
Query:  MGRRRGIRLIFLLFCSTLAISSAALQQQIFPTATESNYQQKTYTKKHGKYGVTNQINRRYSSSAITVSNVIRRGSGSGSGGGGGSGSAAAAGGGEN-GGS
        MGRRR + L+FLLFCST+   S+ALQQQI P  TESNY QKT  +KHGK GVTN+I+  YS+ AITVS               G G  +AAGGGEN GG 
Subjt:  MGRRRGIRLIFLLFCSTLAISSAALQQQIFPTATESNYQQKTYTKKHGKYGVTNQINRRYSSSAITVSNVIRRGSGSGSGGGGGSGSAAAAGGGEN-GGS

Query:  RPRT-GGGTAVIPVYAAGSAQAHHRQGRAHNAGNSYENNMGLLVAAVLAAIAHLCRVF
        RP+  GGG AVIPVYAAGSAQAHHRQGR  NAGN YENNMGLLVA+VLAAI HL  VF
Subjt:  RPRT-GGGTAVIPVYAAGSAQAHHRQGRAHNAGNSYENNMGLLVAAVLAAIAHLCRVF

XP_023517064.1 glycine-rich RNA-binding protein GRP1A-like [Cucurbita pepo subsp. pepo]1.7e-3665.82Show/hide
Query:  MGRRRGIRLIFLLFCSTLAISSAALQQQIFPTATESNYQQKTYTKKHGKYGVTNQINRRYSSSAITVSNVIRRGSGSGSGGGGGSGSAAAAGGGEN-GGS
        MGRRR + L+FLLFCST+   S+ALQQQI P  TESNY QKT  +KHGK GVTN+I+  YS+ AITVS               G G  +AAGGGEN GG 
Subjt:  MGRRRGIRLIFLLFCSTLAISSAALQQQIFPTATESNYQQKTYTKKHGKYGVTNQINRRYSSSAITVSNVIRRGSGSGSGGGGGSGSAAAAGGGEN-GGS

Query:  RPRT-GGGTAVIPVYAAGSAQAHHRQGRAHNAGNSYENNMGLLVAAVLAAIAHLCRVF
        RP+  GGG AVIPVYAAGSAQAHHRQGR  NAGN YENNMGLLVA+VLAAIAHL  VF
Subjt:  RPRT-GGGTAVIPVYAAGSAQAHHRQGRAHNAGNSYENNMGLLVAAVLAAIAHLCRVF

XP_038892711.1 uncharacterized protein LOC120081693 [Benincasa hispida]1.1e-4372.44Show/hide
Query:  MGRRRGIRLIFLLFCSTLAISSAALQQQIFPTATESNYQQKTYTKKHGKYGVTNQINRRYSSSAITVSNVIRRGSGSGSGGGGGSGSAAAAGGGENGGSR
        MGRRR +RLI LL CST+AISSAALQQQIFP  TESNYQQKTYT+K  K G+TNQI RRYS++ ITVSN            G G GSA A GG   GGSR
Subjt:  MGRRRGIRLIFLLFCSTLAISSAALQQQIFPTATESNYQQKTYTKKHGKYGVTNQINRRYSSSAITVSNVIRRGSGSGSGGGGGSGSAAAAGGGENGGSR

Query:  PRTGGGTAVIPVYAAGSAQAHHRQGRAHNAGNSYENNMGLLVAAVLAAIAHLCRVF
        P  GGGTAVIPVYAAGSAQAHHRQGR HNAGN +ENN GLLVAAVLAAIAHL  VF
Subjt:  PRTGGGTAVIPVYAAGSAQAHHRQGRAHNAGNSYENNMGLLVAAVLAAIAHLCRVF

TrEMBL top hitse value%identityAlignment
A0A0A0KUR6 Uncharacterized protein6.6e-7198.72Show/hide
Query:  MGRRRGIRLIFLLFCSTLAISSAALQQQIFPTATESNYQQKTYTKKHGKYGVTNQINRRYSSSAITVSNVIRRGSGSGSGGGGGSGSAAAAGGGENGGSR
        MGRRRGIRLIFLLFCSTLAISSAALQQQIFPTATESNYQQKTYTKKHGKYGVTNQINRRYSSSAITVSNVIRR  GSGSGGGGGSGSAAAAGGGENGGSR
Subjt:  MGRRRGIRLIFLLFCSTLAISSAALQQQIFPTATESNYQQKTYTKKHGKYGVTNQINRRYSSSAITVSNVIRRGSGSGSGGGGGSGSAAAAGGGENGGSR

Query:  PRTGGGTAVIPVYAAGSAQAHHRQGRAHNAGNSYENNMGLLVAAVLAAIAHLCRVF
        PRTGGGTAVIPVYAAGSAQAHHRQGRAHNAGNSYENNMGLLVAAVLAAIAHLCRVF
Subjt:  PRTGGGTAVIPVYAAGSAQAHHRQGRAHNAGNSYENNMGLLVAAVLAAIAHLCRVF

A0A1S3BFU8 uncharacterized protein LOC1034893822.7e-5684.42Show/hide
Query:  RRGIRLIFLLFCSTLAISSAALQQQIFPTATESNYQQKTYTKKHGKYGVTNQINRRYSSSAITVSNVIRRGSGSGSGGGGGSGSAAAAGGGEN-GGSRPR
        RRGIRLIFLLFCSTLAISSAALQQQIFPTATESNYQQKTYT+K GKYGVTNQI+RRYS+SAITVSNVIRR           +G AAAAGGGEN GGSRP 
Subjt:  RRGIRLIFLLFCSTLAISSAALQQQIFPTATESNYQQKTYTKKHGKYGVTNQINRRYSSSAITVSNVIRRGSGSGSGGGGGSGSAAAAGGGEN-GGSRPR

Query:  TGGGTAVIPVYAAGSAQAHHRQGRAHNAGNSYENNMGLLVAAVLAAIAHLCRVF
        TGGGTAVIPVYAAGSAQA HRQGR HNAGN YENN GLLVAAVLAAIAHLCRV+
Subjt:  TGGGTAVIPVYAAGSAQAHHRQGRAHNAGNSYENNMGLLVAAVLAAIAHLCRVF

A0A5A7SUI0 Uncharacterized protein2.7e-5684.42Show/hide
Query:  RRGIRLIFLLFCSTLAISSAALQQQIFPTATESNYQQKTYTKKHGKYGVTNQINRRYSSSAITVSNVIRRGSGSGSGGGGGSGSAAAAGGGEN-GGSRPR
        RRGIRLIFLLFCSTLAISSAALQQQIFPTATESNYQQKTYT+K GKYGVTNQI+RRYS+SAITVSNVIRR           +G AAAAGGGEN GGSRP 
Subjt:  RRGIRLIFLLFCSTLAISSAALQQQIFPTATESNYQQKTYTKKHGKYGVTNQINRRYSSSAITVSNVIRRGSGSGSGGGGGSGSAAAAGGGEN-GGSRPR

Query:  TGGGTAVIPVYAAGSAQAHHRQGRAHNAGNSYENNMGLLVAAVLAAIAHLCRVF
        TGGGTAVIPVYAAGSAQA HRQGR HNAGN YENN GLLVAAVLAAIAHLCRV+
Subjt:  TGGGTAVIPVYAAGSAQAHHRQGRAHNAGNSYENNMGLLVAAVLAAIAHLCRVF

A0A6J1GZ71 glycine-rich RNA-binding protein GRP1A-like2.4e-3665.19Show/hide
Query:  MGRRRGIRLIFLLFCSTLAISSAALQQQIFPTATESNYQQKTYTKKHGKYGVTNQINRRYSSSAITVSNVIRRGSGSGSGGGGGSGSAAAAGGGEN-GGS
        MGRRR + L+FLLFCST+   S+ALQQQI P  TESNY QKT  +KHGK GVTN+I+  YS+ AITVS               G G  +AAGGGEN GG 
Subjt:  MGRRRGIRLIFLLFCSTLAISSAALQQQIFPTATESNYQQKTYTKKHGKYGVTNQINRRYSSSAITVSNVIRRGSGSGSGGGGGSGSAAAAGGGEN-GGS

Query:  RPRT-GGGTAVIPVYAAGSAQAHHRQGRAHNAGNSYENNMGLLVAAVLAAIAHLCRVF
        RP+  GGG AVIPVYAAGSAQAHHRQGR  NAGN YENNMGLLVA+VLAAI HL  VF
Subjt:  RPRT-GGGTAVIPVYAAGSAQAHHRQGRAHNAGNSYENNMGLLVAAVLAAIAHLCRVF

A0A6J1JB47 uncharacterized protein LOC1114851595.8e-3563.92Show/hide
Query:  MGRRRGIRLIFLLFCSTLAISSAALQQQIFPTATESNYQQKTYTKKHGKYGVTNQINRRYSSSAITVSNVIRRGSGSGSGGGGGSGSAAAAGGGEN-GGS
        MGRRR + L+FLLFCST+   S+A QQQI P  TE NY QKT  +KHG+ GVTN+I+  YS+ AITVS               G G  +AAGGGEN GG 
Subjt:  MGRRRGIRLIFLLFCSTLAISSAALQQQIFPTATESNYQQKTYTKKHGKYGVTNQINRRYSSSAITVSNVIRRGSGSGSGGGGGSGSAAAAGGGEN-GGS

Query:  RPRT-GGGTAVIPVYAAGSAQAHHRQGRAHNAGNSYENNMGLLVAAVLAAIAHLCRVF
        RP+  GGG AVIPVYAAGSAQAHHRQGR  NAGN YENNMGLLVA+VLAAIAHL  VF
Subjt:  RPRT-GGGTAVIPVYAAGSAQAHHRQGRAHNAGNSYENNMGLLVAAVLAAIAHLCRVF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAGAAGAAGAGGTATAAGATTGATTTTCTTACTGTTTTGTTCTACCTTGGCCATTTCATCTGCTGCTCTCCAACAACAAATCTTCCCAACGGCAACAGAGTCTAA
TTACCAACAGAAAACTTACACAAAAAAACATGGTAAATATGGGGTTACTAACCAGATTAACAGAAGATACAGTTCAAGTGCAATCACCGTTTCTAATGTGATTCGTCGTG
GAAGTGGAAGTGGAAGTGGAGGTGGAGGTGGAAGTGGAAGTGCAGCCGCTGCCGGCGGTGGGGAAAATGGTGGCAGTAGACCTCGTACAGGAGGAGGTACAGCCGTGATC
CCTGTTTATGCAGCTGGTTCAGCACAAGCACATCACCGCCAAGGTCGAGCACATAATGCAGGAAATAGCTATGAGAACAATATGGGGCTTCTGGTAGCTGCAGTTTTGGC
CGCCATTGCTCATCTCTGTAGAGTTTTCTGA
mRNA sequenceShow/hide mRNA sequence
TATCGAGATTATATCTGTCAATGAACAGTTATTCTTGATTTTTATTACTAACAAACAGCAGTAAAGCAGAAGAGTGAAAACCGTGTCCTGATCCTGAAGGCACTTCAACA
AGGTAGGAAAAAAGAAAAAGACAGAAAGATTCGAGTTCGTGTTTCTTTTTAAAACTGTGTATTATTCTACGTGTCCGTGTGCTTAAAAGAGATAAGAGTACTTTAGTGGA
TTCGAAGAAGAAAAAAACCTAAGAACTTCCACTTCCCCACCGTTTTATATAAACAAATCAGAGTAGAAGACCGTTTTCCTATTACCTAATAAAGAGAGAAGATAGCTATT
TCTATTACAACAATGGGAAGAAGAAGAGGTATAAGATTGATTTTCTTACTGTTTTGTTCTACCTTGGCCATTTCATCTGCTGCTCTCCAACAACAAATCTTCCCAACGGC
AACAGAGTCTAATTACCAACAGAAAACTTACACAAAAAAACATGGTAAATATGGGGTTACTAACCAGATTAACAGAAGATACAGTTCAAGTGCAATCACCGTTTCTAATG
TGATTCGTCGTGGAAGTGGAAGTGGAAGTGGAGGTGGAGGTGGAAGTGGAAGTGCAGCCGCTGCCGGCGGTGGGGAAAATGGTGGCAGTAGACCTCGTACAGGAGGAGGT
ACAGCCGTGATCCCTGTTTATGCAGCTGGTTCAGCACAAGCACATCACCGCCAAGGTCGAGCACATAATGCAGGAAATAGCTATGAGAACAATATGGGGCTTCTGGTAGC
TGCAGTTTTGGCCGCCATTGCTCATCTCTGTAGAGTTTTCTGATATCAAGGCTGTCTCCACTGGGACACAATAACATTGTTATATTGTTGGGCCTCCGTTTCCTGTTAAG
GTCAAGAAAAAAGTAAAATATTTGGCTTGCAAATGATTGTATGTGCAGAGAGAGAACCTCATAAAGTTTTTTTTTTCTTGTTTTGAGTGACCGTTGTATTGTACAGACGG
AAGTATTTTAATTGCGTTAATTAGATACTCGTCTCAGGCATTATAATCACATAACTGAAACTATTGAATGTAAGAAACCAGTGAGAGATTCACCTCGTTAATATTCCAGT
TCTTCAACCTTCATGGTGAGAGCAATTGCAGGGTTGTGGACATTTTGGTTTATCCTATTTCAATTGATTGATAAAGACAAAAGTTCAGACTTCAGAAGCAAAGGAGAGAC
TAGATGCATCATGTTAGTGTATTAATGTTGGAATAAATGGTCATGATTCTTCATGAA
Protein sequenceShow/hide protein sequence
MGRRRGIRLIFLLFCSTLAISSAALQQQIFPTATESNYQQKTYTKKHGKYGVTNQINRRYSSSAITVSNVIRRGSGSGSGGGGGSGSAAAAGGGENGGSRPRTGGGTAVI
PVYAAGSAQAHHRQGRAHNAGNSYENNMGLLVAAVLAAIAHLCRVF