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CSPI05G26940 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G26940
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr5:25650809..25651277
RNA-Seq ExpressionCSPI05G26940
SyntenyCSPI05G26940
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8648853.1 hypothetical protein Csa_008932 [Cucumis sativus]1.6e-4899.07Show/hide
Query:  MALRHAPLLFFFLLVLALASSSTTMATSRAMLFIEPTPTIDAKPSPPPTVSEATLVAGFGSSLSTSMPPSFGDFVAFEVPSEVSTANPPMPDWMIRSCKP
        MALRHAPLLFFFLLVLALASSSTTMATSRAMLFIEPTPTIDAKPSPPPTVSEATLVAGFGSSLSTSMPPSFGDFVAFEVPSEVSTANPPMPDWMIRSCKP
Subjt:  MALRHAPLLFFFLLVLALASSSTTMATSRAMLFIEPTPTIDAKPSPPPTVSEATLVAGFGSSLSTSMPPSFGDFVAFEVPSEVSTANPPMPDWMIRSCKP

Query:  KGRMRYS
        KGRMR S
Subjt:  KGRMRYS

KAG6573847.1 hypothetical protein SDJN03_27734, partial [Cucurbita argyrosperma subsp. sororia]1.4e-1754.46Show/hide
Query:  LALASSSTTMATSRAMLFIEPTPTIDAKPSPPPTVSEATLVAGFGSSLSTSMPPSFGDFVAFEVPSEVSTANPPMPDWMIRSCKPKGRMRYSAPSDRRNS
        LA+ S+S+    S  ++    T T        P+  EAT V G GS++   M P+  DFVAFEVP+ +  A PPM + +IRSCKPKGRMRYSAPSDRRNS
Subjt:  LALASSSTTMATSRAMLFIEPTPTIDAKPSPPPTVSEATLVAGFGSSLSTSMPPSFGDFVAFEVPSEVSTANPPMPDWMIRSCKPKGRMRYSAPSDRRNS

Query:  EPLVSIVCSNMS
         PLVSIVCSNMS
Subjt:  EPLVSIVCSNMS

KAG6595583.1 hypothetical protein SDJN03_12136, partial [Cucurbita argyrosperma subsp. sororia]2.1e-0536.94Show/hide
Query:  LLFFFLLVLALASSSTTMATSRAMLFIEPTPTIDAKPSPPPTVSEATLVAGFGSSLSTSMPPSFGDFVAFEVPSEVSTANPPMPDWMIRSCKPKGRMRYS
        L   F L++ ++S ST +ATSR ML       +D K SPP    +               PP+  DF    +P+  + A PPMP+  +RSCKPKG +R+S
Subjt:  LLFFFLLVLALASSSTTMATSRAMLFIEPTPTIDAKPSPPPTVSEATLVAGFGSSLSTSMPPSFGDFVAFEVPSEVSTANPPMPDWMIRSCKPKGRMRYS

Query:  APSDRRNSEPL
        +PS  RN+ P+
Subjt:  APSDRRNSEPL

TYK09256.1 hypothetical protein E5676_scaffold475G002500 [Cucumis melo var. makuwa]1.5e-4682.48Show/hide
Query:  MALRHAPLLFFFLLVLALASSSTTMATSRAMLFIEPTPT---------IDAKPS-PPPTVSEATLVAGFGSSLSTSMPPSFGDFVAFEVPSEVSTANPPM
        MAL  APLLFF  LVLALASSSTTMATSRAMLFI PTPT         +DAKPS   P +SEATLVAGFGSS STSMPPSFGDFVAFEVPSEVS ANPP 
Subjt:  MALRHAPLLFFFLLVLALASSSTTMATSRAMLFIEPTPT---------IDAKPS-PPPTVSEATLVAGFGSSLSTSMPPSFGDFVAFEVPSEVSTANPPM

Query:  PDWMIRSCKPKGRMRYSAPSDRRNSEPLVSIVCSNMS
        PDWMIRSCKPKGRMRYSAPSDRRNSEPL+SIVCSNMS
Subjt:  PDWMIRSCKPKGRMRYSAPSDRRNSEPLVSIVCSNMS

TrEMBL top hitse value%identityAlignment
A0A0A0KRI3 Uncharacterized protein5.2e-50100Show/hide
Query:  MATSRAMLFIEPTPTIDAKPSPPPTVSEATLVAGFGSSLSTSMPPSFGDFVAFEVPSEVSTANPPMPDWMIRSCKPKGRMRYSAPSDRRNSEPLVSIVCS
        MATSRAMLFIEPTPTIDAKPSPPPTVSEATLVAGFGSSLSTSMPPSFGDFVAFEVPSEVSTANPPMPDWMIRSCKPKGRMRYSAPSDRRNSEPLVSIVCS
Subjt:  MATSRAMLFIEPTPTIDAKPSPPPTVSEATLVAGFGSSLSTSMPPSFGDFVAFEVPSEVSTANPPMPDWMIRSCKPKGRMRYSAPSDRRNSEPLVSIVCS

Query:  NMS
        NMS
Subjt:  NMS

A0A5D3CFX3 Uncharacterized protein7.1e-4782.48Show/hide
Query:  MALRHAPLLFFFLLVLALASSSTTMATSRAMLFIEPTPT---------IDAKPS-PPPTVSEATLVAGFGSSLSTSMPPSFGDFVAFEVPSEVSTANPPM
        MAL  APLLFF  LVLALASSSTTMATSRAMLFI PTPT         +DAKPS   P +SEATLVAGFGSS STSMPPSFGDFVAFEVPSEVS ANPP 
Subjt:  MALRHAPLLFFFLLVLALASSSTTMATSRAMLFIEPTPT---------IDAKPS-PPPTVSEATLVAGFGSSLSTSMPPSFGDFVAFEVPSEVSTANPPM

Query:  PDWMIRSCKPKGRMRYSAPSDRRNSEPLVSIVCSNMS
        PDWMIRSCKPKGRMRYSAPSDRRNSEPL+SIVCSNMS
Subjt:  PDWMIRSCKPKGRMRYSAPSDRRNSEPLVSIVCSNMS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCTACGTCATGCTCCTCTCCTCTTCTTTTTCCTCCTCGTTTTAGCTTTAGCTTCTTCTTCTACGACCATGGCAACATCTAGAGCCATGTTGTTTATAGAACCAAC
TCCAACCATCGATGCAAAACCTTCTCCACCACCAACGGTATCTGAAGCTACGTTGGTTGCAGGATTTGGCTCATCGTTATCAACTTCCATGCCTCCAAGTTTTGGTGATT
TTGTTGCTTTTGAGGTTCCTAGTGAAGTGAGTACTGCAAATCCACCAATGCCTGATTGGATGATTAGAAGTTGTAAGCCTAAAGGTCGAATGAGGTATTCTGCTCCTAGT
GATCGTAGGAACAGTGAACCTCTTGTCTCTATTGTATGTTCAAACATGTCGTGA
mRNA sequenceShow/hide mRNA sequence
CCACACTCAATGCAATAACCAAACCCTAAACAACTCATACTCTCTATAGTGTTGTCATTTTTGTTATCTTTGTCAATGGCTCTACGTCATGCTCCTCTCCTCTTCTTTTT
CCTCCTCGTTTTAGCTTTAGCTTCTTCTTCTACGACCATGGCAACATCTAGAGCCATGTTGTTTATAGAACCAACTCCAACCATCGATGCAAAACCTTCTCCACCACCAA
CGGTATCTGAAGCTACGTTGGTTGCAGGATTTGGCTCATCGTTATCAACTTCCATGCCTCCAAGTTTTGGTGATTTTGTTGCTTTTGAGGTTCCTAGTGAAGTGAGTACT
GCAAATCCACCAATGCCTGATTGGATGATTAGAAGTTGTAAGCCTAAAGGTCGAATGAGGTATTCTGCTCCTAGTGATCGTAGGAACAGTGAACCTCTTGTCTCTATTGT
ATGTTCAAACATGTCGTGAAAAATTGAAC
Protein sequenceShow/hide protein sequence
MALRHAPLLFFFLLVLALASSSTTMATSRAMLFIEPTPTIDAKPSPPPTVSEATLVAGFGSSLSTSMPPSFGDFVAFEVPSEVSTANPPMPDWMIRSCKPKGRMRYSAPS
DRRNSEPLVSIVCSNMS