; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI05G26960 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G26960
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionthioredoxin-like 3-2, chloroplastic isoform X2
Genome locationChr5:25666815..25668336
RNA-Seq ExpressionCSPI05G26960
SyntenyCSPI05G26960
Gene Ontology termsGO:0009570 - chloroplast stroma (cellular component)
InterPro domainsIPR036249 - Thioredoxin-like superfamily
IPR044253 - Thioredoxin-like 3-1/3-2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034706.1 thioredoxin-like 3-2 [Cucumis melo var. makuwa]1.5e-8491.62Show/hide
Query:  MVKALPLHHGIVKSFPKFGSSFDLPPSPQLLSARLAGSGFNRLPLSRKFPPLFQKVPATGEKTSLFGAWTQDSALQFRDESPVSIELKSISSELEFDKAI
        MVKALPLH GIVKSFPKF SSFDLPPSPQLLSARL GSGFNRLPLSRKFPP+FQKV ATGEKTSL GAWTQDSALQFRDESPVSIELKSISSELEFDKAI
Subjt:  MVKALPLHHGIVKSFPKFGSSFDLPPSPQLLSARLAGSGFNRLPLSRKFPPLFQKVPATGEKTSLFGAWTQDSALQFRDESPVSIELKSISSELEFDKAI

Query:  ADAEERNELVILVWMANWCRNYIYLKPQLERLAADYYP-------RLQFYCIDVNMVPHKLVVRAGLAVSSFQSLLMFV
        ADAEERNELVILVWMANWCRNYIYLKPQLERLAADYYP       RLQFYCIDVNMVPHKLVVRAGLAVSSF+SLLMF+
Subjt:  ADAEERNELVILVWMANWCRNYIYLKPQLERLAADYYP-------RLQFYCIDVNMVPHKLVVRAGLAVSSFQSLLMFV

XP_004142496.2 thioredoxin-like 3-2, chloroplastic isoform X1 [Cucumis sativus]6.7e-8598.76Show/hide
Query:  MVKALPLHHGIVKSFPKFGSSFDLPPSPQLLSARLAGSGFNRLPLSRKFPPLFQKVPATGEKTSLFGAWTQDSALQFRDESPVSIELKSISSELEFDKAI
        MVKALPLHHGIVKSFPKFGSSFDLPPSPQLLSARLAGSGFNRLPLSRKFPPLFQKV ATGEKTSLFGAWTQDSALQFRDESPVSIELKSISSELEFDKAI
Subjt:  MVKALPLHHGIVKSFPKFGSSFDLPPSPQLLSARLAGSGFNRLPLSRKFPPLFQKVPATGEKTSLFGAWTQDSALQFRDESPVSIELKSISSELEFDKAI

Query:  ADAEERNELVILVWMANWCRNYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLA
        ADAEERNELVILVWMANWCRNYIYLKPQLERLAADYYPRLQFYCIDVN+VPHKLVVRAGLA
Subjt:  ADAEERNELVILVWMANWCRNYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLA

XP_008446851.1 PREDICTED: thioredoxin-like 3-2, chloroplastic isoform X7 [Cucumis melo]3.1e-8296.3Show/hide
Query:  MVKALPLHHGIVKSFPKFGSSFDLPPSPQLLSARLAGSGFNRLPLSRKFPPLFQKVPATGEKTSLFGAWTQDSALQFRDESPVSIELKSISSELEFDKAI
        MVKALPLH GIVKSFPKF SSFDLPPSPQLLSARL GSGFNRLPLSRKFPP+FQKV ATGEKTSL GAWTQDSALQFRDESPVSIELKSISSELEFDKAI
Subjt:  MVKALPLHHGIVKSFPKFGSSFDLPPSPQLLSARLAGSGFNRLPLSRKFPPLFQKVPATGEKTSLFGAWTQDSALQFRDESPVSIELKSISSELEFDKAI

Query:  ADAEERNELVILVWMANWCRNYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAV
        ADAEERNELVILVWMANWCRNYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAV
Subjt:  ADAEERNELVILVWMANWCRNYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAV

XP_008446853.1 PREDICTED: thioredoxin-like 3-2, chloroplastic isoform X9 [Cucumis melo]1.4e-8293.98Show/hide
Query:  MVKALPLHHGIVKSFPKFGSSFDLPPSPQLLSARLAGSGFNRLPLSRKFPPLFQKVPATGEKTSLFGAWTQDSALQFRDESPVSIELKSISSELEFDKAI
        MVKALPLH GIVKSFPKF SSFDLPPSPQLLSARL GSGFNRLPLSRKFPP+FQKV ATGEKTSL GAWTQDSALQFRDESPVSIELKSISSELEFDKAI
Subjt:  MVKALPLHHGIVKSFPKFGSSFDLPPSPQLLSARLAGSGFNRLPLSRKFPPLFQKVPATGEKTSLFGAWTQDSALQFRDESPVSIELKSISSELEFDKAI

Query:  ADAEERNELVILVWMANWCRNYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAVSSFQ
        ADAEERNELVILVWMANWCRNYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLA+ + Q
Subjt:  ADAEERNELVILVWMANWCRNYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAVSSFQ

XP_031742295.1 thioredoxin-like 3-2, chloroplastic isoform X2 [Cucumis sativus]2.3e-8598.77Show/hide
Query:  MVKALPLHHGIVKSFPKFGSSFDLPPSPQLLSARLAGSGFNRLPLSRKFPPLFQKVPATGEKTSLFGAWTQDSALQFRDESPVSIELKSISSELEFDKAI
        MVKALPLHHGIVKSFPKFGSSFDLPPSPQLLSARLAGSGFNRLPLSRKFPPLFQKV ATGEKTSLFGAWTQDSALQFRDESPVSIELKSISSELEFDKAI
Subjt:  MVKALPLHHGIVKSFPKFGSSFDLPPSPQLLSARLAGSGFNRLPLSRKFPPLFQKVPATGEKTSLFGAWTQDSALQFRDESPVSIELKSISSELEFDKAI

Query:  ADAEERNELVILVWMANWCRNYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAV
        ADAEERNELVILVWMANWCRNYIYLKPQLERLAADYYPRLQFYCIDVN+VPHKLVVRAGLAV
Subjt:  ADAEERNELVILVWMANWCRNYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAV

TrEMBL top hitse value%identityAlignment
A0A0A0KUX7 Thioredoxin domain-containing protein3.2e-8598.76Show/hide
Query:  MVKALPLHHGIVKSFPKFGSSFDLPPSPQLLSARLAGSGFNRLPLSRKFPPLFQKVPATGEKTSLFGAWTQDSALQFRDESPVSIELKSISSELEFDKAI
        MVKALPLHHGIVKSFPKFGSSFDLPPSPQLLSARLAGSGFNRLPLSRKFPPLFQKV ATGEKTSLFGAWTQDSALQFRDESPVSIELKSISSELEFDKAI
Subjt:  MVKALPLHHGIVKSFPKFGSSFDLPPSPQLLSARLAGSGFNRLPLSRKFPPLFQKVPATGEKTSLFGAWTQDSALQFRDESPVSIELKSISSELEFDKAI

Query:  ADAEERNELVILVWMANWCRNYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLA
        ADAEERNELVILVWMANWCRNYIYLKPQLERLAADYYPRLQFYCIDVN+VPHKLVVRAGLA
Subjt:  ADAEERNELVILVWMANWCRNYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLA

A0A1S3BG22 thioredoxin-like 3-2, chloroplastic isoform X21.5e-8296.3Show/hide
Query:  MVKALPLHHGIVKSFPKFGSSFDLPPSPQLLSARLAGSGFNRLPLSRKFPPLFQKVPATGEKTSLFGAWTQDSALQFRDESPVSIELKSISSELEFDKAI
        MVKALPLH GIVKSFPKF SSFDLPPSPQLLSARL GSGFNRLPLSRKFPP+FQKV ATGEKTSL GAWTQDSALQFRDESPVSIELKSISSELEFDKAI
Subjt:  MVKALPLHHGIVKSFPKFGSSFDLPPSPQLLSARLAGSGFNRLPLSRKFPPLFQKVPATGEKTSLFGAWTQDSALQFRDESPVSIELKSISSELEFDKAI

Query:  ADAEERNELVILVWMANWCRNYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAV
        ADAEERNELVILVWMANWCRNYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAV
Subjt:  ADAEERNELVILVWMANWCRNYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAV

A0A1S3BG27 thioredoxin-like 3-2, chloroplastic isoform X71.5e-8296.3Show/hide
Query:  MVKALPLHHGIVKSFPKFGSSFDLPPSPQLLSARLAGSGFNRLPLSRKFPPLFQKVPATGEKTSLFGAWTQDSALQFRDESPVSIELKSISSELEFDKAI
        MVKALPLH GIVKSFPKF SSFDLPPSPQLLSARL GSGFNRLPLSRKFPP+FQKV ATGEKTSL GAWTQDSALQFRDESPVSIELKSISSELEFDKAI
Subjt:  MVKALPLHHGIVKSFPKFGSSFDLPPSPQLLSARLAGSGFNRLPLSRKFPPLFQKVPATGEKTSLFGAWTQDSALQFRDESPVSIELKSISSELEFDKAI

Query:  ADAEERNELVILVWMANWCRNYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAV
        ADAEERNELVILVWMANWCRNYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAV
Subjt:  ADAEERNELVILVWMANWCRNYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAV

A0A1S3BGW0 thioredoxin-like 3-2, chloroplastic isoform X96.8e-8393.98Show/hide
Query:  MVKALPLHHGIVKSFPKFGSSFDLPPSPQLLSARLAGSGFNRLPLSRKFPPLFQKVPATGEKTSLFGAWTQDSALQFRDESPVSIELKSISSELEFDKAI
        MVKALPLH GIVKSFPKF SSFDLPPSPQLLSARL GSGFNRLPLSRKFPP+FQKV ATGEKTSL GAWTQDSALQFRDESPVSIELKSISSELEFDKAI
Subjt:  MVKALPLHHGIVKSFPKFGSSFDLPPSPQLLSARLAGSGFNRLPLSRKFPPLFQKVPATGEKTSLFGAWTQDSALQFRDESPVSIELKSISSELEFDKAI

Query:  ADAEERNELVILVWMANWCRNYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAVSSFQ
        ADAEERNELVILVWMANWCRNYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLA+ + Q
Subjt:  ADAEERNELVILVWMANWCRNYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAVSSFQ

A0A5A7SXW3 Thioredoxin-like 3-27.2e-8591.62Show/hide
Query:  MVKALPLHHGIVKSFPKFGSSFDLPPSPQLLSARLAGSGFNRLPLSRKFPPLFQKVPATGEKTSLFGAWTQDSALQFRDESPVSIELKSISSELEFDKAI
        MVKALPLH GIVKSFPKF SSFDLPPSPQLLSARL GSGFNRLPLSRKFPP+FQKV ATGEKTSL GAWTQDSALQFRDESPVSIELKSISSELEFDKAI
Subjt:  MVKALPLHHGIVKSFPKFGSSFDLPPSPQLLSARLAGSGFNRLPLSRKFPPLFQKVPATGEKTSLFGAWTQDSALQFRDESPVSIELKSISSELEFDKAI

Query:  ADAEERNELVILVWMANWCRNYIYLKPQLERLAADYYP-------RLQFYCIDVNMVPHKLVVRAGLAVSSFQSLLMFV
        ADAEERNELVILVWMANWCRNYIYLKPQLERLAADYYP       RLQFYCIDVNMVPHKLVVRAGLAVSSF+SLLMF+
Subjt:  ADAEERNELVILVWMANWCRNYIYLKPQLERLAADYYP-------RLQFYCIDVNMVPHKLVVRAGLAVSSFQSLLMFV

SwissProt top hitse value%identityAlignment
Q6Z7L3 Thioredoxin-like 3-1, chloroplastic5.1e-1140.79Show/hide
Query:  IELKSISSELEFDKAIADAEERNELVILVWMANWCRNYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGL
        +E++ I S  + D A+  + E  + +I+ WMA+WCR  IYLKP+LE++A + +P ++FY +DVN VP  +V R  +
Subjt:  IELKSISSELEFDKAIADAEERNELVILVWMANWCRNYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGL

Q8VZT6 Thioredoxin-like 3-2, chloroplastic8.6e-2746.27Show/hide
Query:  SPQLLSARLAGSGFNRLPLSRKFPPLFQKVPATGEKTSLFGAWTQDSALQFRDESPVSIELKSISSELEFDKAIADAEERNELVILVWMANWCRNYIYLK
        SP +   R   S F+R P + K+     K+    E+        QD  LQ  D+SPVS+EL  I  E  FD+ + DA++  E V++VWMA WCR  IYLK
Subjt:  SPQLLSARLAGSGFNRLPLSRKFPPLFQKVPATGEKTSLFGAWTQDSALQFRDESPVSIELKSISSELEFDKAIADAEERNELVILVWMANWCRNYIYLK

Query:  PQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGL
        P+LE+LAA++YPRL+FY +DVN VP++LV RAG+
Subjt:  PQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGL

Q9FG36 Thioredoxin-like 3-1, chloroplastic1.3e-1443.75Show/hide
Query:  PVSIELKSISSELEFDKAIADAEERNELVILVWMANWCRNYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLA
        P ++E++ I++  E D  ++ A + ++ +I+ WMA+WCR  IYLKP+LE+LAA+Y  R +FY +DVN VP  LV R  ++
Subjt:  PVSIELKSISSELEFDKAIADAEERNELVILVWMANWCRNYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLA

Arabidopsis top hitse value%identityAlignment
AT5G04260.1 WCRKC thioredoxin 26.1e-2846.27Show/hide
Query:  SPQLLSARLAGSGFNRLPLSRKFPPLFQKVPATGEKTSLFGAWTQDSALQFRDESPVSIELKSISSELEFDKAIADAEERNELVILVWMANWCRNYIYLK
        SP +   R   S F+R P + K+     K+    E+        QD  LQ  D+SPVS+EL  I  E  FD+ + DA++  E V++VWMA WCR  IYLK
Subjt:  SPQLLSARLAGSGFNRLPLSRKFPPLFQKVPATGEKTSLFGAWTQDSALQFRDESPVSIELKSISSELEFDKAIADAEERNELVILVWMANWCRNYIYLK

Query:  PQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGL
        P+LE+LAA++YPRL+FY +DVN VP++LV RAG+
Subjt:  PQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGL

AT5G06690.1 WCRKC thioredoxin 19.2e-1643.75Show/hide
Query:  PVSIELKSISSELEFDKAIADAEERNELVILVWMANWCRNYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLA
        P ++E++ I++  E D  ++ A + ++ +I+ WMA+WCR  IYLKP+LE+LAA+Y  R +FY +DVN VP  LV R  ++
Subjt:  PVSIELKSISSELEFDKAIADAEERNELVILVWMANWCRNYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLA

AT5G06690.2 WCRKC thioredoxin 12.9e-1740.62Show/hide
Query:  PVSIELKSISSELEFDKAIADAEERNELVILVWMANWCRNYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAVSSFQSLLMFVPFFLC
        P ++E++ I++  E D  ++ A + ++ +I+ WMA+WCR  IYLKP+LE+LAA+Y  R +FY +DVN VP  LV R  ++V     +L F    +C
Subjt:  PVSIELKSISSELEFDKAIADAEERNELVILVWMANWCRNYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAVSSFQSLLMFVPFFLC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCAAAGCTCTGCCCCTTCACCACGGAATTGTGAAATCTTTTCCCAAATTCGGCAGTTCTTTTGATCTTCCTCCGTCTCCTCAACTTCTGTCCGCGAGGCTCGCCGG
CTCTGGTTTCAATAGGCTTCCTTTGTCTCGGAAATTTCCGCCGCTTTTTCAGAAAGTTCCTGCGACTGGTGAGAAGACTTCGCTTTTTGGAGCTTGGACCCAAGATAGTG
CCTTGCAATTTCGAGATGAATCGCCTGTTTCGATTGAGCTTAAGTCAATTTCGAGTGAACTTGAGTTCGATAAGGCTATTGCAGATGCGGAGGAACGCAACGAGCTCGTG
ATTCTTGTTTGGATGGCTAACTGGTGCAGAAATTATATCTATTTAAAGCCTCAACTGGAAAGATTGGCTGCTGATTATTACCCCAGATTGCAATTCTACTGCATTGATGT
CAATATGGTGCCACACAAGCTAGTTGTTCGAGCCGGACTAGCTGTAAGTTCCTTTCAAAGCCTTTTGATGTTTGTTCCATTTTTTTTGTGTTGCCTTAAACCTTTATATT
GA
mRNA sequenceShow/hide mRNA sequence
AAGAAATTCAAGGATTGCATGCGGCAGTCAGCAACGACTTCCGGGATGCTTCCCTTTGTATTTCTTTTTGTTTAATTTCATTATTCTATTTTGTTTCTTAATTCTCTCTT
TTTTATTTATTATTTTGTTTTACGAAACCAAATGGCGTTTCGTTAAGGTTTCACAGTTTGTGAAATCCATCGGAAACAATATCTGAATTCACTCTGATTCTCCCGGTGGG
ACTTCACCGGAACCATCTCTGACGCCGCCGCTGCCGCTGTTCCCATCTAGTCCACCACTCTCTCTCTCTCCCCTACTTTGAATTTTTCTTTTTGTTTCCCAATTCTTCTC
CCCTTCCGAAATGGTCAAAGCTCTGCCCCTTCACCACGGAATTGTGAAATCTTTTCCCAAATTCGGCAGTTCTTTTGATCTTCCTCCGTCTCCTCAACTTCTGTCCGCGA
GGCTCGCCGGCTCTGGTTTCAATAGGCTTCCTTTGTCTCGGAAATTTCCGCCGCTTTTTCAGAAAGTTCCTGCGACTGGTGAGAAGACTTCGCTTTTTGGAGCTTGGACC
CAAGATAGTGCCTTGCAATTTCGAGATGAATCGCCTGTTTCGATTGAGCTTAAGTCAATTTCGAGTGAACTTGAGTTCGATAAGGCTATTGCAGATGCGGAGGAACGCAA
CGAGCTCGTGATTCTTGTTTGGATGGCTAACTGGTGCAGAAATTATATCTATTTAAAGCCTCAACTGGAAAGATTGGCTGCTGATTATTACCCCAGATTGCAATTCTACT
GCATTGATGTCAATATGGTGCCACACAAGCTAGTTGTTCGAGCCGGACTAGCTGTAAGTTCCTTTCAAAGCCTTTTGATGTTTGTTCCATTTTTTTTGTGTTGCCTTAAA
CCTTTATATTGATCTTCTTTAGGTAGGACTTGAGGTTATGATAACTTCTACTTCTCTGAGAGAGTGATTTTCTTTGGATACTGTACTAGAGCTTCTGTCTACAATGGAAA
TTAGGGCTTGTGTTTCATTGCCTTCAGGAACATTCCCAACTTGCAGTTTGAACATAGGAG
Protein sequenceShow/hide protein sequence
MVKALPLHHGIVKSFPKFGSSFDLPPSPQLLSARLAGSGFNRLPLSRKFPPLFQKVPATGEKTSLFGAWTQDSALQFRDESPVSIELKSISSELEFDKAIADAEERNELV
ILVWMANWCRNYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAVSSFQSLLMFVPFFLCCLKPLY