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CSPI05G27210 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G27210
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionglycine-rich cell wall structural protein 1.0-like
Genome locationChr5:25792874..25793340
RNA-Seq ExpressionCSPI05G27210
SyntenyCSPI05G27210
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8648858.1 hypothetical protein Csa_007747 [Cucumis sativus]8.8e-47100Show/hide
Query:  MQINPTNPNKPTPMITPNAIPAFCPPLNPFEPPPPFSFNAPLGVGDGGGDEPKLGGGAGGKLTVELGGGGGELVVLDGGGGVSVALDGDGGGGASVVLAG
        MQINPTNPNKPTPMITPNAIPAFCPPLNPFEPPPPFSFNAPLGVGDGGGDEPKLGGGAGGKLTVELGGGGGELVVLDGGGGVSVALDGDGGGGASVVLAG
Subjt:  MQINPTNPNKPTPMITPNAIPAFCPPLNPFEPPPPFSFNAPLGVGDGGGDEPKLGGGAGGKLTVELGGGGGELVVLDGGGGVSVALDGDGGGGASVVLAG

Query:  GGGGGA
        GGGGGA
Subjt:  GGGGGA

XP_022957272.1 loricrin-like [Cucurbita moschata]2.0e-2766.67Show/hide
Query:  MQINPTNPNKPTPMITPNAIPAFCPPLNPFEPPPPFSFNAPLGVGDGGGDEPKLGGGAGGKLTVELGGGGGELVVLDGGGGVSVALDGDGGGGASVVLAG
        MQ+NP NPNKP P+ITPNA+PAFCPPL+PFE  PPFSFNA    G GGGDE   G GAGG++ V  GGGG  +V   GGGG+ V LDG GGGG  VVL G
Subjt:  MQINPTNPNKPTPMITPNAIPAFCPPLNPFEPPPPFSFNAPLGVGDGGGDEPKLGGGAGGKLTVELGGGGGELVVLDGGGGVSVALDGDGGGGASVVLAG

Query:  GGGGGASVALDGGGGGGASVALDGGGGGG
         GGGG  V LDG GGGG  V LDGGGGGG
Subjt:  GGGGGASVALDGGGGGGASVALDGGGGGG

XP_022990509.1 glycine-rich cell wall structural protein 1.0-like [Cucurbita maxima]1.8e-2364.12Show/hide
Query:  INPTNPNKPTPMITPNAIPAFCPPLNPFEPPPPFSFNAPLGVGDGGGDEPKLGGGAGGKLTVELGGGGGELVVLD---GGGGVSVALDGDGGGGASVVLA
        +NP NPNKP P+ITP  +PAFCPPL+PFE  PPFSFNA   VG GGGDE   G GA        GGGGG  VV D   GGGG+   LDG GGGG  VVL 
Subjt:  INPTNPNKPTPMITPNAIPAFCPPLNPFEPPPPFSFNAPLGVGDGGGDEPKLGGGAGGKLTVELGGGGGELVVLD---GGGGVSVALDGDGGGGASVVLA

Query:  GGGGGGASVALDGGGGGGASVALDGGGGGGA
        GGGGGG  V LDG GGGG  V LDGGGGGGA
Subjt:  GGGGGGASVALDGGGGGGASVALDGGGGGGA

XP_023549817.1 glycine-rich cell wall structural protein-like [Cucurbita pepo subsp. pepo]2.2e-2665.38Show/hide
Query:  MQINPTNPNKPTPMITPNAIPAFCPPLNPFEPPPPFSFNAPLGVGDGGGDEPKLGGGAGGKLTVELGGGGGELVVLDGGGGVSVALDGDGGGGASVVLAG
        MQ+NP NPNKP PMITPNA+PAFCPPL+PFE  PPFSFNA    G G GDE   G GAGG++ V  GGGG  +V   GGGG SV  +G GGGG  VVL  
Subjt:  MQINPTNPNKPTPMITPNAIPAFCPPLNPFEPPPPFSFNAPLGVGDGGGDEPKLGGGAGGKLTVELGGGGGELVVLDGGGGVSVALDGDGGGGASVVLAG

Query:  GGGGGASVALDGGGGGGASVALDGGGGGGA
         GGGG  V LDG GGGG  V LDGGGGGGA
Subjt:  GGGGGASVALDGGGGGGASVALDGGGGGGA

XP_031741791.1 glycine-rich protein 23-like [Cucumis sativus]1.6e-56100Show/hide
Query:  MQINPTNPNKPTPMITPNAIPAFCPPLNPFEPPPPFSFNAPLGVGDGGGDEPKLGGGAGGKLTVELGGGGGELVVLDGGGGVSVALDGDGGGGASVVLAG
        MQINPTNPNKPTPMITPNAIPAFCPPLNPFEPPPPFSFNAPLGVGDGGGDEPKLGGGAGGKLTVELGGGGGELVVLDGGGGVSVALDGDGGGGASVVLAG
Subjt:  MQINPTNPNKPTPMITPNAIPAFCPPLNPFEPPPPFSFNAPLGVGDGGGDEPKLGGGAGGKLTVELGGGGGELVVLDGGGGVSVALDGDGGGGASVVLAG

Query:  GGGGGASVALDGGGGGGASVALDGGGGGGA
        GGGGGASVALDGGGGGGASVALDGGGGGGA
Subjt:  GGGGGASVALDGGGGGGASVALDGGGGGGA

TrEMBL top hitse value%identityAlignment
A0A1S4DW63 loricrin-like5.4e-1066.29Show/hide
Query:  GVGDGGGDEPKLGGGAGGKLTVELGGGGGELVVLD--GGGGVSVALDGDGGGGASVVLAGGGGGGASVALDGGGGGGASVALDGGGGGG
        G G GGGDE  +  G GG   V  GGGGG  VV D  GGGGVSV  DG GGGG SVV  GGGGGG SV  DGGGGGG  V LDGGGGGG
Subjt:  GVGDGGGDEPKLGGGAGGKLTVELGGGGGELVVLD--GGGGVSVALDGDGGGGASVVLAGGGGGGASVALDGGGGGGASVALDGGGGGG

A0A6J1GYP3 loricrin-like9.8e-2866.67Show/hide
Query:  MQINPTNPNKPTPMITPNAIPAFCPPLNPFEPPPPFSFNAPLGVGDGGGDEPKLGGGAGGKLTVELGGGGGELVVLDGGGGVSVALDGDGGGGASVVLAG
        MQ+NP NPNKP P+ITPNA+PAFCPPL+PFE  PPFSFNA    G GGGDE   G GAGG++ V  GGGG  +V   GGGG+ V LDG GGGG  VVL G
Subjt:  MQINPTNPNKPTPMITPNAIPAFCPPLNPFEPPPPFSFNAPLGVGDGGGDEPKLGGGAGGKLTVELGGGGGELVVLDGGGGVSVALDGDGGGGASVVLAG

Query:  GGGGGASVALDGGGGGGASVALDGGGGGG
         GGGG  V LDG GGGG  V LDGGGGGG
Subjt:  GGGGGASVALDGGGGGGASVALDGGGGGG

A0A6J1JS83 glycine-rich cell wall structural protein 1.0-like8.6e-2464.12Show/hide
Query:  INPTNPNKPTPMITPNAIPAFCPPLNPFEPPPPFSFNAPLGVGDGGGDEPKLGGGAGGKLTVELGGGGGELVVLD---GGGGVSVALDGDGGGGASVVLA
        +NP NPNKP P+ITP  +PAFCPPL+PFE  PPFSFNA   VG GGGDE   G GA        GGGGG  VV D   GGGG+   LDG GGGG  VVL 
Subjt:  INPTNPNKPTPMITPNAIPAFCPPLNPFEPPPPFSFNAPLGVGDGGGDEPKLGGGAGGKLTVELGGGGGELVVLD---GGGGVSVALDGDGGGGASVVLA

Query:  GGGGGGASVALDGGGGGGASVALDGGGGGGA
        GGGGGG  V LDG GGGG  V LDGGGGGGA
Subjt:  GGGGGGASVALDGGGGGGASVALDGGGGGGA

A0A7K8R4S6 K2C75 protein (Fragment)2.6e-0454.74Show/hide
Query:  PFSFNAPLGVGDGGGDEPKLGGGAGGKLTVELGGGGGELVVLDGGGGVSVALDGDGGGGASVVLAGGGGGGASVALDGGGGGGASVALDGGGGGG
        P S++  +    G    P LGGG GG L++  GGGGG    L GGGG S  L G GGGG+S  L GGGGGG+S  L GGGGGG+S  L GGGGGG
Subjt:  PFSFNAPLGVGDGGGDEPKLGGGAGGKLTVELGGGGGELVVLDGGGGVSVALDGDGGGGASVVLAGGGGGGASVALDGGGGGGASVALDGGGGGG

I1XA89 Circumsporozoite protein (Fragment)2.0e-0454.26Show/hide
Query:  PLGVGDGGGDEPKL----GGGAGGKLTVELGGGGGELVVLDGGGGVSVALDG-DGGGGASVVLAGGGGGGASVALDGGGGGGASVALDGGGGGG
        P G G GGG E  +    GGG GG+  V  GGGGGE VV  GGGG    + G  GGGG   V  GGGGGG      GGGGGG +VA  GGGGGG
Subjt:  PLGVGDGGGDEPKL----GGGAGGKLTVELGGGGGELVVLDGGGGVSVALDG-DGGGGASVVLAGGGGGGASVALDGGGGGGASVALDGGGGGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAATTAATCCTACAAATCCCAACAAACCTACTCCTATGATCACTCCAAATGCAATCCCTGCCTTTTGTCCCCCGCTCAATCCTTTTGAACCTCCACCACCCTTTTC
CTTCAATGCTCCATTAGGCGTTGGCGACGGTGGTGGAGATGAACCCAAGTTAGGCGGCGGTGCAGGTGGTAAGTTAACAGTGGAATTAGGTGGTGGTGGTGGGGAGTTGG
TTGTATTGGATGGGGGTGGGGGAGTGTCAGTTGCGTTGGATGGTGACGGTGGAGGCGGAGCGTCAGTGGTGTTGGCTGGTGGCGGTGGAGGCGGAGCGTCGGTGGCGTTG
GATGGTGGCGGTGGAGGTGGAGCGTCGGTGGCGTTGGATGGTGGGGGTGGAGGTGGAGCGTAG
mRNA sequenceShow/hide mRNA sequence
ATCCGTTGGGTTAAAGGATTGAGTCTCTTGCAGCATATCCGTAACTGCTTCTTCTTGCATTACTACGACGTTTGATGCAAATTAATCCTACAAATCCCAACAAACCTACT
CCTATGATCACTCCAAATGCAATCCCTGCCTTTTGTCCCCCGCTCAATCCTTTTGAACCTCCACCACCCTTTTCCTTCAATGCTCCATTAGGCGTTGGCGACGGTGGTGG
AGATGAACCCAAGTTAGGCGGCGGTGCAGGTGGTAAGTTAACAGTGGAATTAGGTGGTGGTGGTGGGGAGTTGGTTGTATTGGATGGGGGTGGGGGAGTGTCAGTTGCGT
TGGATGGTGACGGTGGAGGCGGAGCGTCAGTGGTGTTGGCTGGTGGCGGTGGAGGCGGAGCGTCGGTGGCGTTGGATGGTGGCGGTGGAGGTGGAGCGTCGGTGGCGTTG
GATGGTGGGGGTGGAGGTGGAGCGTAG
Protein sequenceShow/hide protein sequence
MQINPTNPNKPTPMITPNAIPAFCPPLNPFEPPPPFSFNAPLGVGDGGGDEPKLGGGAGGKLTVELGGGGGELVVLDGGGGVSVALDGDGGGGASVVLAGGGGGGASVAL
DGGGGGGASVALDGGGGGGA