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CSPI05G27740 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G27740
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionNADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6
Genome locationChr5:26163310..26167090
RNA-Seq ExpressionCSPI05G27740
SyntenyCSPI05G27740
Gene Ontology termsGO:0006979 - response to oxidative stress (biological process)
GO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domainsIPR016488 - NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 6


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8648872.1 hypothetical protein Csa_008170 [Cucumis sativus]2.8e-6498.44Show/hide
Query:  MAFTVRGLKVPPNSASLEEARCRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
        MAFTVRGLKVPPNSASLEEAR RVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
Subjt:  MAFTVRGLKVPPNSASLEEARCRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ

Query:  YVVGREGLVQDFGAKDQGRSNFLKNFYK
        YV+GREGLVQDFGAKDQGRSNFLKNFYK
Subjt:  YVVGREGLVQDFGAKDQGRSNFLKNFYK

XP_004142382.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 [Cucumis sativus]7.8e-6798.48Show/hide
Query:  MAFTVRGLKVPPNSASLEEARCRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
        MAFTVRGLKVPPNSASLEEAR RVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
Subjt:  MAFTVRGLKVPPNSASLEEARCRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ

Query:  YVVGREGLVQDFGAKDQGRSNFLKNFYKSNYF
        YV+GREGLVQDFGAKDQGRSNFLKNFYKSNYF
Subjt:  YVVGREGLVQDFGAKDQGRSNFLKNFYKSNYF

XP_008446979.1 PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 [Cucumis melo]5.6e-6596.21Show/hide
Query:  MAFTVRGLKVPPNSASLEEARCRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
        MAFTVRGLKVPPNSASLEEAR RVFDFFRSACRSLPAIMDIYNLDDV TVSQLRS IASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
Subjt:  MAFTVRGLKVPPNSASLEEARCRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ

Query:  YVVGREGLVQDFGAKDQGRSNFLKNFYKSNYF
        YVVGREGLVQDFGAKDQG SNFLKNFY+SNYF
Subjt:  YVVGREGLVQDFGAKDQGRSNFLKNFYKSNYF

XP_023552714.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 [Cucurbita pepo subsp. pepo]1.4e-6393.94Show/hide
Query:  MAFTVRGLKVPPNSASLEEARCRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
        MAFTVRGLKVPPNSASLEEAR RVFDFFRSACRSLPAIMDIYNLDDV T+SQ+RS IASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
Subjt:  MAFTVRGLKVPPNSASLEEARCRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ

Query:  YVVGREGLVQDFGAKDQGRSNFLKNFYKSNYF
        YVVGREGLVQD G+KDQG SNFLKNFYKSNYF
Subjt:  YVVGREGLVQDFGAKDQGRSNFLKNFYKSNYF

XP_038892169.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 [Benincasa hispida]2.1e-6496.21Show/hide
Query:  MAFTVRGLKVPPNSASLEEARCRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
        MAFTVRGLKVPPNSASLEEAR RVFDFFRSACRSLPAIMDIYNLDDV TVSQLRS IASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
Subjt:  MAFTVRGLKVPPNSASLEEARCRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ

Query:  YVVGREGLVQDFGAKDQGRSNFLKNFYKSNYF
        YVVGREGLVQD GAKDQG SNFLKNFYKSNYF
Subjt:  YVVGREGLVQDFGAKDQGRSNFLKNFYKSNYF

TrEMBL top hitse value%identityAlignment
A0A0A0KRV0 Uncharacterized protein3.8e-6798.48Show/hide
Query:  MAFTVRGLKVPPNSASLEEARCRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
        MAFTVRGLKVPPNSASLEEAR RVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
Subjt:  MAFTVRGLKVPPNSASLEEARCRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ

Query:  YVVGREGLVQDFGAKDQGRSNFLKNFYKSNYF
        YV+GREGLVQDFGAKDQGRSNFLKNFYKSNYF
Subjt:  YVVGREGLVQDFGAKDQGRSNFLKNFYKSNYF

A0A1S3BH79 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 62.7e-6596.21Show/hide
Query:  MAFTVRGLKVPPNSASLEEARCRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
        MAFTVRGLKVPPNSASLEEAR RVFDFFRSACRSLPAIMDIYNLDDV TVSQLRS IASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
Subjt:  MAFTVRGLKVPPNSASLEEARCRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ

Query:  YVVGREGLVQDFGAKDQGRSNFLKNFYKSNYF
        YVVGREGLVQDFGAKDQG SNFLKNFY+SNYF
Subjt:  YVVGREGLVQDFGAKDQGRSNFLKNFYKSNYF

A0A6J1CBT6 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 63.1e-6189.39Show/hide
Query:  MAFTVRGLKVPPNSASLEEARCRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
        MAFT R LKVPPNSASLEEAR RVFDFFRSACRSLP IMDIYNLDDVAT+SQLRS++AS+IRKNSH+ DPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
Subjt:  MAFTVRGLKVPPNSASLEEARCRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ

Query:  YVVGREGLVQDFGAKDQGRSNFLKNFYKSNYF
        YVVG EGLVQD G KDQG SNFLKNFYKSNYF
Subjt:  YVVGREGLVQDFGAKDQGRSNFLKNFYKSNYF

A0A6J1H232 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 65.6e-6393.18Show/hide
Query:  MAFTVRGLKVPPNSASLEEARCRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
        MAFTVRGLKVPPNSASLEEAR RVFDFFRSACRSLPAIM+IYNLDDV T SQ+RS IASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
Subjt:  MAFTVRGLKVPPNSASLEEARCRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ

Query:  YVVGREGLVQDFGAKDQGRSNFLKNFYKSNYF
        YVVGREGLVQD G+KDQG SNFLKNFYKSNYF
Subjt:  YVVGREGLVQDFGAKDQGRSNFLKNFYKSNYF

A0A6J1JDJ2 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 69.6e-6392.42Show/hide
Query:  MAFTVRGLKVPPNSASLEEARCRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
        MAFTVRGLKVPPNSASLEEAR RVFDFFRSACRSLPAIM+IYNLDDV T+S +RS IASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ
Subjt:  MAFTVRGLKVPPNSASLEEARCRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQ

Query:  YVVGREGLVQDFGAKDQGRSNFLKNFYKSNYF
        YVVGREGLVQD G+KDQG SNFLKNFYKSNYF
Subjt:  YVVGREGLVQDFGAKDQGRSNFLKNFYKSNYF

SwissProt top hitse value%identityAlignment
P56556 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 65.0e-0836.36Show/hide
Query:  PPNSASLEEARCRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHII
        P  S  + EA+ RV + +R+  R +P  +  + LD   TV   R  +     KN+HVTDP+V+D+L+ KG  EL    +  KQR H++
Subjt:  PPNSASLEEARCRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHII

Q02366 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 64.5e-0935.23Show/hide
Query:  PPNSASLEEARCRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHII
        P  S  + EA+ RV + +R+  R +P  + ++ LD   +V Q R  +    +KN+H+TDP+V+D+L+ KG  EL    +  KQR H++
Subjt:  PPNSASLEEARCRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHII

Q0MQA4 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 65.0e-0836.36Show/hide
Query:  PPNSASLEEARCRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHII
        P  S  + EA+ RV + +R+  R +P  +  + LD   TV   R  +     KN+HVTDP+V+D+L+ KG  EL    +  KQR H++
Subjt:  PPNSASLEEARCRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHII

Q9CQZ5 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 64.5e-0938.64Show/hide
Query:  PPNSASLEEARCRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHII
        P  S  L EA+ RV + +R+  R +P  + +  LD   TV Q R  +     KN+HVTDP+V+D+L+ KG  EL    +  KQR H++
Subjt:  PPNSASLEEARCRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHII

Q9LHI0 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 61.5e-4972.31Show/hide
Query:  FTVRGLKVPPNSASLEEARCRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYV
        F +R + VPPNSA+L EAR RVFDFFR+ACRS+P IMDIYNL DV   SQLR AI+++IR N+H+TDPKVID+L+FKGMEEL +I +HAKQRHHIIGQYV
Subjt:  FTVRGLKVPPNSASLEEARCRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYV

Query:  VGREGLVQDFGAKDQGRSNFLKNFYKSNYF
        VG EGLVQ+ G KDQG+++FLKNFY SNYF
Subjt:  VGREGLVQDFGAKDQGRSNFLKNFYKSNYF

Arabidopsis top hitse value%identityAlignment
AT3G12260.1 LYR family of Fe/S cluster biogenesis protein1.1e-5072.31Show/hide
Query:  FTVRGLKVPPNSASLEEARCRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYV
        F +R + VPPNSA+L EAR RVFDFFR+ACRS+P IMDIYNL DV   SQLR AI+++IR N+H+TDPKVID+L+FKGMEEL +I +HAKQRHHIIGQYV
Subjt:  FTVRGLKVPPNSASLEEARCRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYV

Query:  VGREGLVQDFGAKDQGRSNFLKNFYKSNYF
        VG EGLVQ+ G KDQG+++FLKNFY SNYF
Subjt:  VGREGLVQDFGAKDQGRSNFLKNFYKSNYF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTTCACAGTTCGAGGTTTGAAGGTTCCGCCCAACTCTGCGAGTCTTGAAGAAGCCCGGTGTCGGGTCTTCGATTTCTTCAGATCAGCATGTAGATCCTTGCCAGC
AATCATGGACATTTACAACTTGGATGATGTCGCTACTGTCTCTCAACTCCGTTCTGCCATCGCCTCTGAGATCCGCAAGAATTCTCACGTCACCGACCCTAAGGTGATTG
ATATGCTTCTTTTCAAGGGAATGGAAGAGCTTGGTAACATTACTGAACATGCGAAGCAACGACATCACATCATTGGTCAGTATGTGGTTGGTCGCGAAGGACTTGTGCAA
GATTTTGGTGCCAAGGATCAAGGCAGGTCCAATTTTCTCAAGAACTTCTACAAGAGTAACTACTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTTCACAGTTCGAGGTTTGAAGGTTCCGCCCAACTCTGCGAGTCTTGAAGAAGCCCGGTGTCGGGTCTTCGATTTCTTCAGATCAGCATGTAGATCCTTGCCAGC
AATCATGGACATTTACAACTTGGATGATGTCGCTACTGTCTCTCAACTCCGTTCTGCCATCGCCTCTGAGATCCGCAAGAATTCTCACGTCACCGACCCTAAGGTGATTG
ATATGCTTCTTTTCAAGGGAATGGAAGAGCTTGGTAACATTACTGAACATGCGAAGCAACGACATCACATCATTGGTCAGTATGTGGTTGGTCGCGAAGGACTTGTGCAA
GATTTTGGTGCCAAGGATCAAGGCAGGTCCAATTTTCTCAAGAACTTCTACAAGAGTAACTACTTCTGA
Protein sequenceShow/hide protein sequence
MAFTVRGLKVPPNSASLEEARCRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGREGLVQ
DFGAKDQGRSNFLKNFYKSNYF