; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI05G28130 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G28130
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRNA exonuclease 4
Genome locationChr5:26659195..26663148
RNA-Seq ExpressionCSPI05G28130
SyntenyCSPI05G28130
Gene Ontology termsGO:0006364 - rRNA processing (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008408 - 3'-5' exonuclease activity (molecular function)
InterPro domainsIPR012337 - Ribonuclease H-like superfamily
IPR013520 - Exonuclease, RNase T/DNA polymerase III
IPR036397 - Ribonuclease H superfamily
IPR037431 - RNA exonuclease 4, DEDDh 3'-5' exonuclease domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011656270.1 RNA exonuclease 4 [Cucumis sativus]7.5e-18599.37Show/hide
Query:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAIFDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTVIDSGRTRG
        MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAIFDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTVIDSGRTRG
Subjt:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAIFDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTVIDSGRTRG

Query:  SGAIALACKYVGGGSDGSMDICAKVCLIDEGENVIFYSYVKPVTAVTNYRYETTGIRPEHIRDAIPMKQVQKKIQEILYNGGEKARILVGDCVEDDLKRL
        SGAIALACKYVGGGSDGSMDICAKVCLIDEGENVIFYSYVKPVTAVTNYRYETTGIRPEHIRDA+P+KQVQKKIQEILYNGGEKARILVGDCVEDDLKRL
Subjt:  SGAIALACKYVGGGSDGSMDICAKVCLIDEGENVIFYSYVKPVTAVTNYRYETTGIRPEHIRDAIPMKQVQKKIQEILYNGGEKARILVGDCVEDDLKRL

Query:  QIGYPSFMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKENYPMASDPQNKNNFAIWRENELQRMSPEQML
        QIGYPSFMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKENYPMASDPQNKNNFAIWRENELQRMSPEQML
Subjt:  QIGYPSFMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKENYPMASDPQNKNNFAIWRENELQRMSPEQML

Query:  EISRSDYYCWCMDLRI
        EISRSDYYCWCMDLRI
Subjt:  EISRSDYYCWCMDLRI

XP_022134351.1 RNA exonuclease 4 isoform X1 [Momordica charantia]1.4e-15984.81Show/hide
Query:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAIFDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTVIDSGRTRG
        MRTSFHS HEP CAICKKHCRSLDSLREHLIGPLPKQECKNIF TRGCKFCLAI DS YSQRLHQERCQFS VNSGLLAR ANLGIRD S V+D GR R 
Subjt:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAIFDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTVIDSGRTRG

Query:  SGAIALACKYVGGGSDGSMDICAKVCLIDEGENVIFYSYVKPVTAVTNYRYETTGIRPEHIRDAIPMKQVQKKIQEILYNGGEKARILVGDCVEDDLKRL
        +G +ALACKYVGGG DGS+DICAKVCLIDE ENVIFYSYVKP+  VTNYR+ETTGIRPEH+RDA+P+KQVQKKIQEILYNGGEKAR+LVG  VEDDLKRL
Subjt:  SGAIALACKYVGGGSDGSMDICAKVCLIDEGENVIFYSYVKPVTAVTNYRYETTGIRPEHIRDAIPMKQVQKKIQEILYNGGEKARILVGDCVEDDLKRL

Query:  QIGYPSFMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKENYPMASDPQNKNNFAIWRENELQRMSPEQML
        QIGYP  +IRDTANYPPLMK+SKLCNSLKYLAQVYLGFD+QNGIQDPYE+C+ +MRLYKRMRSQVH+ E+YPMASDPQNKNNF IWR+NEL+RM+PE ML
Subjt:  QIGYPSFMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKENYPMASDPQNKNNFAIWRENELQRMSPEQML

Query:  EISRSDYYCWCMDLRI
        +ISRSDYYCWC+DLRI
Subjt:  EISRSDYYCWCMDLRI

XP_022938612.1 RNA exonuclease 4-like [Cucurbita moschata]7.3e-16487.03Show/hide
Query:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAIFDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTVIDSGRTRG
        MRTSFHS HEPTCA+CKKHCRSLDSLREHLIGPLPKQECKN+F  RGCKFCLAI DSSYSQRLHQERCQFS VNSGLLAR ANLGIRDGST ID GRTRG
Subjt:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAIFDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTVIDSGRTRG

Query:  SGAIALACKYVGGGSDGSMDICAKVCLIDEGENVIFYSYVKPVTAVTNYRYETTGIRPEHIRDAIPMKQVQKKIQEILYNGGEKARILVGDCVEDDLKRL
        SG +ALACKYVGGG DGS+D+CAKVCLIDE ENVIFYSYVKP+  VTNYRYE TGIRPEH+RDA+P+KQVQKKIQ+ILYNGGEKAR+LVG CVEDDLKRL
Subjt:  SGAIALACKYVGGGSDGSMDICAKVCLIDEGENVIFYSYVKPVTAVTNYRYETTGIRPEHIRDAIPMKQVQKKIQEILYNGGEKARILVGDCVEDDLKRL

Query:  QIGYPSFMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKENYPMASDPQNKNNFAIWRENELQRMSPEQML
        QIGYPS MIRD ANYPPLMK+SKLCNSLKYLAQVYLGF++QNG+QDPYEEC+  MRLYKRMRSQVHR E++PMASDPQNKNNFA WRE+EL+RMSPEQML
Subjt:  QIGYPSFMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKENYPMASDPQNKNNFAIWRENELQRMSPEQML

Query:  EISRSDYYCWCMDLRI
        EISRSDYYCWCMDLRI
Subjt:  EISRSDYYCWCMDLRI

XP_022993635.1 RNA exonuclease 4-like [Cucurbita maxima]2.5e-16487.34Show/hide
Query:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAIFDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTVIDSGRTRG
        MRTSFHS HEPTCA+CKKHCRSLDSLREHLIGPLPKQECKN+F  RGCKFCLAI DSSYSQRLHQERCQFS VNSGLLAR ANLGIRDGST ID GRTRG
Subjt:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAIFDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTVIDSGRTRG

Query:  SGAIALACKYVGGGSDGSMDICAKVCLIDEGENVIFYSYVKPVTAVTNYRYETTGIRPEHIRDAIPMKQVQKKIQEILYNGGEKARILVGDCVEDDLKRL
        SG +ALACKYVGGG DGS+D+CAKVCLIDE ENVIFYSYVKP   VTNYRYETTGIRPEH+RDA+P+KQVQKKIQ+ILYNGGEKAR+LVG CVEDDLKRL
Subjt:  SGAIALACKYVGGGSDGSMDICAKVCLIDEGENVIFYSYVKPVTAVTNYRYETTGIRPEHIRDAIPMKQVQKKIQEILYNGGEKARILVGDCVEDDLKRL

Query:  QIGYPSFMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKENYPMASDPQNKNNFAIWRENELQRMSPEQML
        QIGYPS MIRD ANYPPLMK+SKLCNSLKYLAQVYLGF++QNG+QDPYEEC+  MRLYKRMRSQVHR E++PMASDPQNKNNFA WRE+EL+RMSPEQML
Subjt:  QIGYPSFMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKENYPMASDPQNKNNFAIWRENELQRMSPEQML

Query:  EISRSDYYCWCMDLRI
        EISRSDYYCWCMDLRI
Subjt:  EISRSDYYCWCMDLRI

XP_023551468.1 RNA exonuclease 4-like [Cucurbita pepo subsp. pepo]1.7e-16085.44Show/hide
Query:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAIFDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTVIDSGRTRG
        MRTSFHS HEPTCA+CKKHCRSLDSLREHLIGPLPKQECKN+F  RGCKFCLAI DSSYSQR+HQERCQFS VNSGLLAR A+LGIRDGST ID GRTRG
Subjt:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAIFDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTVIDSGRTRG

Query:  SGAIALACKYVGGGSDGSMDICAKVCLIDEGENVIFYSYVKPVTAVTNYRYETTGIRPEHIRDAIPMKQVQKKIQEILYNGGEKARILVGDCVEDDLKRL
        SG +ALACKYVGGG DGS+D+CAKVCLIDE EN++FYSYVKP+  VTNYRYETTGIRPEH+RDA+P+KQVQKKIQ+ILYNGGEKAR+LVG CVEDDLKRL
Subjt:  SGAIALACKYVGGGSDGSMDICAKVCLIDEGENVIFYSYVKPVTAVTNYRYETTGIRPEHIRDAIPMKQVQKKIQEILYNGGEKARILVGDCVEDDLKRL

Query:  QIGYPSFMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKENYPMASDPQNKNNFAIWRENELQRMSPEQML
        QIGYPS MIRD ANYPPLMK+SKLCNSLKYLAQVYLGF++QNG+QD Y +C+  MRLYKRMRSQVHR E++PMASDPQNKNNFA WRENEL+RMSPEQML
Subjt:  QIGYPSFMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKENYPMASDPQNKNNFAIWRENELQRMSPEQML

Query:  EISRSDYYCWCMDLRI
        EISRSDYYCWCMDLRI
Subjt:  EISRSDYYCWCMDLRI

TrEMBL top hitse value%identityAlignment
A0A1S3C947 RNA exonuclease 42.3e-14777.16Show/hide
Query:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAIFDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTVIDSGRTRG
        MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQEC+NIFATRGCKFCLAI DSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGST+IDSGRTRG
Subjt:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAIFDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTVIDSGRTRG

Query:  SGAIALACKYVGGGSDGSMDICAKVCLIDEGENVIFYSYVKPVTAVTNYRYETTGIRPEHIRDAIPMKQVQKKIQEILYNGGE----------KARILVG
        SGAIALACKYVGGGSDGS+DICAKVCL+DEGENVIFYSYVKP+  VTNYRYE TG+RPEH+RDA+P+KQVQKKIQE L NG +          KARILVG
Subjt:  SGAIALACKYVGGGSDGSMDICAKVCLIDEGENVIFYSYVKPVTAVTNYRYETTGIRPEHIRDAIPMKQVQKKIQEILYNGGE----------KARILVG

Query:  DCVEDDLKRLQIGYPSFMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQ-DPYEECIVAMRLYKRMRSQVHRKENYPMASDPQNKNNFAIWREN
          +++ L  LQI YPS MIRDTA YPPLMK+SKL NSL YL Q YLG++++NG + + YEEC+  MRLY +M+SQVH++E YP+ASDP NK NFAIW++ 
Subjt:  DCVEDDLKRLQIGYPSFMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQ-DPYEECIVAMRLYKRMRSQVHRKENYPMASDPQNKNNFAIWREN

Query:  ELQRMSPEQMLEISRSDYYCWCMD
        EL++M+P+Q+L+ISRSDYYCWC+D
Subjt:  ELQRMSPEQMLEISRSDYYCWCMD

A0A6J1BXL4 RNA exonuclease 46.9e-16084.81Show/hide
Query:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAIFDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTVIDSGRTRG
        MRTSFHS HEP CAICKKHCRSLDSLREHLIGPLPKQECKNIF TRGCKFCLAI DS YSQRLHQERCQFS VNSGLLAR ANLGIRD S V+D GR R 
Subjt:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAIFDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTVIDSGRTRG

Query:  SGAIALACKYVGGGSDGSMDICAKVCLIDEGENVIFYSYVKPVTAVTNYRYETTGIRPEHIRDAIPMKQVQKKIQEILYNGGEKARILVGDCVEDDLKRL
        +G +ALACKYVGGG DGS+DICAKVCLIDE ENVIFYSYVKP+  VTNYR+ETTGIRPEH+RDA+P+KQVQKKIQEILYNGGEKAR+LVG  VEDDLKRL
Subjt:  SGAIALACKYVGGGSDGSMDICAKVCLIDEGENVIFYSYVKPVTAVTNYRYETTGIRPEHIRDAIPMKQVQKKIQEILYNGGEKARILVGDCVEDDLKRL

Query:  QIGYPSFMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKENYPMASDPQNKNNFAIWRENELQRMSPEQML
        QIGYP  +IRDTANYPPLMK+SKLCNSLKYLAQVYLGFD+QNGIQDPYE+C+ +MRLYKRMRSQVH+ E+YPMASDPQNKNNF IWR+NEL+RM+PE ML
Subjt:  QIGYPSFMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKENYPMASDPQNKNNFAIWRENELQRMSPEQML

Query:  EISRSDYYCWCMDLRI
        +ISRSDYYCWC+DLRI
Subjt:  EISRSDYYCWCMDLRI

A0A6J1BZE0 RNA exonuclease 46.9e-16084.81Show/hide
Query:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAIFDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTVIDSGRTRG
        MRTSFHS HEP CAICKKHCRSLDSLREHLIGPLPKQECKNIF TRGCKFCLAI DS YSQRLHQERCQFS VNSGLLAR ANLGIRD S V+D GR R 
Subjt:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAIFDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTVIDSGRTRG

Query:  SGAIALACKYVGGGSDGSMDICAKVCLIDEGENVIFYSYVKPVTAVTNYRYETTGIRPEHIRDAIPMKQVQKKIQEILYNGGEKARILVGDCVEDDLKRL
        +G +ALACKYVGGG DGS+DICAKVCLIDE ENVIFYSYVKP+  VTNYR+ETTGIRPEH+RDA+P+KQVQKKIQEILYNGGEKAR+LVG  VEDDLKRL
Subjt:  SGAIALACKYVGGGSDGSMDICAKVCLIDEGENVIFYSYVKPVTAVTNYRYETTGIRPEHIRDAIPMKQVQKKIQEILYNGGEKARILVGDCVEDDLKRL

Query:  QIGYPSFMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKENYPMASDPQNKNNFAIWRENELQRMSPEQML
        QIGYP  +IRDTANYPPLMK+SKLCNSLKYLAQVYLGFD+QNGIQDPYE+C+ +MRLYKRMRSQVH+ E+YPMASDPQNKNNF IWR+NEL+RM+PE ML
Subjt:  QIGYPSFMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKENYPMASDPQNKNNFAIWRENELQRMSPEQML

Query:  EISRSDYYCWCMDLRI
        +ISRSDYYCWC+DLRI
Subjt:  EISRSDYYCWCMDLRI

A0A6J1FEK0 RNA exonuclease 43.5e-16487.03Show/hide
Query:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAIFDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTVIDSGRTRG
        MRTSFHS HEPTCA+CKKHCRSLDSLREHLIGPLPKQECKN+F  RGCKFCLAI DSSYSQRLHQERCQFS VNSGLLAR ANLGIRDGST ID GRTRG
Subjt:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAIFDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTVIDSGRTRG

Query:  SGAIALACKYVGGGSDGSMDICAKVCLIDEGENVIFYSYVKPVTAVTNYRYETTGIRPEHIRDAIPMKQVQKKIQEILYNGGEKARILVGDCVEDDLKRL
        SG +ALACKYVGGG DGS+D+CAKVCLIDE ENVIFYSYVKP+  VTNYRYE TGIRPEH+RDA+P+KQVQKKIQ+ILYNGGEKAR+LVG CVEDDLKRL
Subjt:  SGAIALACKYVGGGSDGSMDICAKVCLIDEGENVIFYSYVKPVTAVTNYRYETTGIRPEHIRDAIPMKQVQKKIQEILYNGGEKARILVGDCVEDDLKRL

Query:  QIGYPSFMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKENYPMASDPQNKNNFAIWRENELQRMSPEQML
        QIGYPS MIRD ANYPPLMK+SKLCNSLKYLAQVYLGF++QNG+QDPYEEC+  MRLYKRMRSQVHR E++PMASDPQNKNNFA WRE+EL+RMSPEQML
Subjt:  QIGYPSFMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKENYPMASDPQNKNNFAIWRENELQRMSPEQML

Query:  EISRSDYYCWCMDLRI
        EISRSDYYCWCMDLRI
Subjt:  EISRSDYYCWCMDLRI

A0A6J1JZ30 RNA exonuclease 41.2e-16487.34Show/hide
Query:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAIFDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTVIDSGRTRG
        MRTSFHS HEPTCA+CKKHCRSLDSLREHLIGPLPKQECKN+F  RGCKFCLAI DSSYSQRLHQERCQFS VNSGLLAR ANLGIRDGST ID GRTRG
Subjt:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAIFDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTVIDSGRTRG

Query:  SGAIALACKYVGGGSDGSMDICAKVCLIDEGENVIFYSYVKPVTAVTNYRYETTGIRPEHIRDAIPMKQVQKKIQEILYNGGEKARILVGDCVEDDLKRL
        SG +ALACKYVGGG DGS+D+CAKVCLIDE ENVIFYSYVKP   VTNYRYETTGIRPEH+RDA+P+KQVQKKIQ+ILYNGGEKAR+LVG CVEDDLKRL
Subjt:  SGAIALACKYVGGGSDGSMDICAKVCLIDEGENVIFYSYVKPVTAVTNYRYETTGIRPEHIRDAIPMKQVQKKIQEILYNGGEKARILVGDCVEDDLKRL

Query:  QIGYPSFMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKENYPMASDPQNKNNFAIWRENELQRMSPEQML
        QIGYPS MIRD ANYPPLMK+SKLCNSLKYLAQVYLGF++QNG+QDPYEEC+  MRLYKRMRSQVHR E++PMASDPQNKNNFA WRE+EL+RMSPEQML
Subjt:  QIGYPSFMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKENYPMASDPQNKNNFAIWRENELQRMSPEQML

Query:  EISRSDYYCWCMDLRI
        EISRSDYYCWCMDLRI
Subjt:  EISRSDYYCWCMDLRI

SwissProt top hitse value%identityAlignment
O94375 RNA exonuclease 43.5e-2034.97Show/hide
Query:  IALACKYVGGGSDGSMDICAKVCLIDEGENVIFYSYVKPVTAVTNYRYETTGIRPEHIRDAIPMKQVQKKIQEILYNGGEKARILVGDCVEDDLKRLQIG
        IA+ C+ VG   D  M + A+V +++   +V++ +YV+P   VT++R   +G++  H+RDA   ++VQ ++ +IL N     R+LVG  V +DLK L + 
Subjt:  IALACKYVGGGSDGSMDICAKVCLIDEGENVIFYSYVKPVTAVTNYRYETTGIRPEHIRDAIPMKQVQKKIQEILYNGGEKARILVGDCVEDDLKRLQIG

Query:  YPSFMIRDTANYPPLMKSSK-LCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQV
        +P  MIRDT+ +    K +K     LK LA+V LG D+Q+G     ++    M LYK+++ ++
Subjt:  YPSFMIRDTANYPPLMKSSK-LCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQV

Q08237 RNA exonuclease 47.9e-2032.24Show/hide
Query:  TVIDSGRTRGSGA-IALACKYVGGGSDGSMDICAKVCLIDEGENVIFYSYVKPVTAVTNYRYETTGIRPEHIRDAIPMKQVQKKIQEILYNGGEKARILV
        T I+S +++  G  IA+ C++VG G +G     A++ +++   +V+   +VKP   V  +R   +GI+PEH+++AI  K+ QKK  +IL     + RILV
Subjt:  TVIDSGRTRGSGA-IALACKYVGGGSDGSMDICAKVCLIDEGENVIFYSYVKPVTAVTNYRYETTGIRPEHIRDAIPMKQVQKKIQEILYNGGEKARILV

Query:  GDCVEDDLKRLQIGYPSFMIRDTANYPPLMK--SSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQ---VHR
        G  ++ DL+ L + +P  ++RDT+ + P  K  +     SLK L +  L   +Q G     E+    M LYK+ +++   +HR
Subjt:  GDCVEDDLKRLQIGYPSFMIRDTANYPPLMK--SSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQ---VHR

Q6FQA0 RNA exonuclease 47.9e-2033.92Show/hide
Query:  IALACKYVGGGSDGSMDICAKVCLIDEGENVIFYSYVKPVTAVTNYRYETTGIRPEHIRDAIPMKQVQKKIQEILYNGGEKARILVGDCVEDDLKRLQIG
        IA+ C++VG G +G     A+V L++   NV+   +VKP   VT++R   +GI P+H+++A+  KQ Q+++ +IL     K +ILVG  V+ DL+ L + 
Subjt:  IALACKYVGGGSDGSMDICAKVCLIDEGENVIFYSYVKPVTAVTNYRYETTGIRPEHIRDAIPMKQVQKKIQEILYNGGEKARILVGDCVEDDLKRLQIG

Query:  YPSFMIRDTANYPPLMK--SSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMR---SQVHRKE
        +P   + DTA + P  +  +     SLK LA+  L  D+Q+G     E+    M +YK  +    + HRK+
Subjt:  YPSFMIRDTANYPPLMK--SSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMR---SQVHRKE

Q91560 RNA exonuclease 43.2e-2138.46Show/hide
Query:  IALACKYVGGGSDGSMDICAKVCLIDEGENVIFYSYVKPVTAVTNYRYETTGIRPEHIRDAIPMKQVQKKIQEILYNGGEKARILVGDCVEDDLKRLQIG
        +A+ C+ VG G DG   I A+V +++     ++  YVKP   VT+YR   +GIRPE ++   P K VQK++ EIL     + R LVG  V +DLK L + 
Subjt:  IALACKYVGGGSDGSMDICAKVCLIDEGENVIFYSYVKPVTAVTNYRYETTGIRPEHIRDAIPMKQVQKKIQEILYNGGEKARILVGDCVEDDLKRLQIG

Query:  YPSFMIRDTANYPPLMKSSKLCN-SLKYLAQVYLGFDLQNGIQDPYEECIVAMRLY
        +P   IRDT  Y P  +  K    SLK L +  L   +Q G     ++   AMRLY
Subjt:  YPSFMIRDTANYPPLMKSSKLCN-SLKYLAQVYLGFDLQNGIQDPYEECIVAMRLY

Q9GZR2 RNA exonuclease 41.6e-2033.33Show/hide
Query:  LGIRDGSTVIDSGRTRGSG----AIALACKYVGGGSDGSMDICAKVCLIDEGENVIFYSYVKPVTAVTNYRYETTGIRPEHIRDAIPMKQVQKKIQEILY
        LG  +GS  +   + +  G    A+AL C+ VG G  G   + A+V ++++    ++  YVKP   VT+YR   +GIRPE+++    ++ VQK++ E+L 
Subjt:  LGIRDGSTVIDSGRTRGSG----AIALACKYVGGGSDGSMDICAKVCLIDEGENVIFYSYVKPVTAVTNYRYETTGIRPEHIRDAIPMKQVQKKIQEILY

Query:  NGGEKARILVGDCVEDDLKRLQIGYPSFMIRDTANYPPLMKSSKLCN-SLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQ
            K RILVG  + +DLK L + +P   IRDT  Y P     K    SL+ L++  LG  +Q       ++   AMRLY  ++ +
Subjt:  NGGEKARILVGDCVEDDLKRLQIGYPSFMIRDTANYPPLMKSSKLCN-SLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQ

Arabidopsis top hitse value%identityAlignment
AT2G48100.1 Exonuclease family protein8.5e-7040.57Show/hide
Query:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGP--LPKQECKNIFATRGCKFCLAIFDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTVIDSGRT
        M+ S+HS H+P C +C KHC+S +S+REHL  P  L K  CK IF  RGC  CL IF+ +++   H+ +C  SP              R+ S+ +   R 
Subjt:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGP--LPKQECKNIFATRGCKFCLAIFDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTVIDSGRT

Query:  RGSGAIALACKYVGGGSDGSMDICAKVCLIDEGENVIFYSYVKPVTAVTNYRYETTGIRPEHIRDAIPMKQVQKKIQEIL---YNGGEKARILVGDCVED
        +   A+AL C+ VGGG+DG++D CA VCL+D+ ENVIF ++V+P+  VT+YR+E TG+  E ++D +P++ V++++   L    N G    +LVG  +  
Subjt:  RGSGAIALACKYVGGGSDGSMDICAKVCLIDEGENVIFYSYVKPVTAVTNYRYETTGIRPEHIRDAIPMKQVQKKIQEIL---YNGGEKARILVGDCVED

Query:  DLKRLQIGYPSFMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKENYPMASDPQNKNNFAIWRENELQRMS
        D+  L++ YPS ++RDTA Y PLMK++ +  SLKYL + YLG+ +Q G  + YE+C+ AMRLYKRMR Q H      + S     N     ++++L++M+
Subjt:  DLKRLQIGYPSFMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKENYPMASDPQNKNNFAIWRENELQRMS

Query:  PEQMLEISRSDYYCWCMD
         E++ + S S+Y CWC+D
Subjt:  PEQMLEISRSDYYCWCMD

AT2G48100.2 Exonuclease family protein8.5e-7040.57Show/hide
Query:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGP--LPKQECKNIFATRGCKFCLAIFDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTVIDSGRT
        M+ S+HS H+P C +C KHC+S +S+REHL  P  L K  CK IF  RGC  CL IF+ +++   H+ +C  SP              R+ S+ +   R 
Subjt:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGP--LPKQECKNIFATRGCKFCLAIFDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTVIDSGRT

Query:  RGSGAIALACKYVGGGSDGSMDICAKVCLIDEGENVIFYSYVKPVTAVTNYRYETTGIRPEHIRDAIPMKQVQKKIQEIL---YNGGEKARILVGDCVED
        +   A+AL C+ VGGG+DG++D CA VCL+D+ ENVIF ++V+P+  VT+YR+E TG+  E ++D +P++ V++++   L    N G    +LVG  +  
Subjt:  RGSGAIALACKYVGGGSDGSMDICAKVCLIDEGENVIFYSYVKPVTAVTNYRYETTGIRPEHIRDAIPMKQVQKKIQEIL---YNGGEKARILVGDCVED

Query:  DLKRLQIGYPSFMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKENYPMASDPQNKNNFAIWRENELQRMS
        D+  L++ YPS ++RDTA Y PLMK++ +  SLKYL + YLG+ +Q G  + YE+C+ AMRLYKRMR Q H      + S     N     ++++L++M+
Subjt:  DLKRLQIGYPSFMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKENYPMASDPQNKNNFAIWRENELQRMS

Query:  PEQMLEISRSDYYCWCMD
         E++ + S S+Y CWC+D
Subjt:  PEQMLEISRSDYYCWCMD

AT2G48100.3 Exonuclease family protein8.5e-7040.57Show/hide
Query:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGP--LPKQECKNIFATRGCKFCLAIFDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTVIDSGRT
        M+ S+HS H+P C +C KHC+S +S+REHL  P  L K  CK IF  RGC  CL IF+ +++   H+ +C  SP              R+ S+ +   R 
Subjt:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGP--LPKQECKNIFATRGCKFCLAIFDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTVIDSGRT

Query:  RGSGAIALACKYVGGGSDGSMDICAKVCLIDEGENVIFYSYVKPVTAVTNYRYETTGIRPEHIRDAIPMKQVQKKIQEIL---YNGGEKARILVGDCVED
        +   A+AL C+ VGGG+DG++D CA VCL+D+ ENVIF ++V+P+  VT+YR+E TG+  E ++D +P++ V++++   L    N G    +LVG  +  
Subjt:  RGSGAIALACKYVGGGSDGSMDICAKVCLIDEGENVIFYSYVKPVTAVTNYRYETTGIRPEHIRDAIPMKQVQKKIQEIL---YNGGEKARILVGDCVED

Query:  DLKRLQIGYPSFMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKENYPMASDPQNKNNFAIWRENELQRMS
        D+  L++ YPS ++RDTA Y PLMK++ +  SLKYL + YLG+ +Q G  + YE+C+ AMRLYKRMR Q H      + S     N     ++++L++M+
Subjt:  DLKRLQIGYPSFMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKENYPMASDPQNKNNFAIWRENELQRMS

Query:  PEQMLEISRSDYYCWCMD
         E++ + S S+Y CWC+D
Subjt:  PEQMLEISRSDYYCWCMD

AT3G27970.1 Exonuclease family protein2.9e-12664.91Show/hide
Query:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAIFDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTVIDSGRTRG
        M+ S+HS HEPTC +CKKHCRS +SLREHLIGPLPKQECKNIF+ RGC+FC+ I +S  S+R+HQERCQFS VNSGL  R A LG+RD   +ID   +R 
Subjt:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAIFDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTVIDSGRTRG

Query:  SGAIALACKYVGGGSDGSMDICAKVCLIDEGENVIFYSYVKPVTAVTNYRYETTGIRPEHIRDAIPMKQVQKKIQEILYNG---------GEKARILVGD
           +AL+CK VGGGSDGS+D+CA+VC+ DE +NVIF++YVKP  AVT+YRYETTGIRPE++RDA+P+KQVQ+KIQE L NG         G KARILVG 
Subjt:  SGAIALACKYVGGGSDGSMDICAKVCLIDEGENVIFYSYVKPVTAVTNYRYETTGIRPEHIRDAIPMKQVQKKIQEILYNG---------GEKARILVGD

Query:  CVEDDLKRLQIGYPSFMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKENYPMASDPQNKNNFAIWRENEL
         ++ DL RLQ+ YPS MIRDTA YPPLMK+SKL NSLKYL Q YLG+D+  GIQDPYE+C+  MRLY RMR Q H+ E YP+A+D QN++N   WR++E 
Subjt:  CVEDDLKRLQIGYPSFMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKENYPMASDPQNKNNFAIWRENEL

Query:  QRMSPEQMLEISRSDYYCWCMD
        +RMSP++ML ISRSDYYCWC+D
Subjt:  QRMSPEQMLEISRSDYYCWCMD

AT5G40310.1 Exonuclease family protein2.7e-12464.6Show/hide
Query:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAIFDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTVIDSGRTRG
        MR S+HS HEPTC IC KHCRS DSLREHLIGPLPKQECKNIF+ RGC+FCL I +S  ++R+HQERCQ S V SGL+ R A LG+R+ ST ID   +R 
Subjt:  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAIFDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTVIDSGRTRG

Query:  SGAIALACKYVGGGSDGSMDICAKVCLIDEGENVIFYSYVKPVTAVTNYRYETTGIRPEHIRDAIPMKQVQKKIQEILYNG---------GEKARILVGD
           +AL+CK VGGGSDGS+D+CA+VC+ DE ENV+F++YVKP   VTNYRYE TGIRPE++RDA+ +K  Q+K+QE L NG           KARILVG 
Subjt:  SGAIALACKYVGGGSDGSMDICAKVCLIDEGENVIFYSYVKPVTAVTNYRYETTGIRPEHIRDAIPMKQVQKKIQEILYNG---------GEKARILVGD

Query:  CVEDDLKRLQIGYPSFMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKENYPMASDPQNKNNFAIWRENEL
         +++ L  LQ+ Y S MIRDTA YPPLMKSSKL NSLKYL Q YLG+D+  GIQDPYE+C+  MRLY RMR Q HR E YP+ASD QN NNFA WR+NEL
Subjt:  CVEDDLKRLQIGYPSFMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKENYPMASDPQNKNNFAIWRENEL

Query:  QRMSPEQMLEISRSDYYCWCMD
        +RMSPE++L++SRSDYYCWC+D
Subjt:  QRMSPEQMLEISRSDYYCWCMD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGACTTCTTTTCACTCACATCATGAACCAACTTGTGCCATTTGCAAGAAACATTGTCGATCTCTTGATTCTCTTAGAGAACATCTCATTGGGCCACTGCCAAAACA
AGAATGCAAAAACATCTTTGCTACAAGAGGATGCAAGTTTTGCTTGGCCATCTTTGACAGTTCTTACTCACAAAGACTCCACCAAGAAAGATGCCAATTCTCTCCTGTAA
ATTCTGGACTTCTTGCTCGTTTCGCCAACTTGGGAATTCGTGACGGTTCAACCGTCATCGACAGTGGAAGAACACGAGGGTCAGGGGCCATCGCGCTAGCTTGCAAATAT
GTAGGTGGAGGAAGTGATGGGTCGATGGACATATGTGCTAAGGTTTGCCTTATTGATGAGGGTGAGAACGTCATCTTCTATAGCTATGTCAAGCCCGTAACTGCTGTTAC
AAATTATAGGTATGAAACAACTGGAATTCGTCCAGAACACATTCGAGATGCAATACCAATGAAACAAGTTCAAAAGAAAATTCAAGAAATCCTCTACAATGGAGGTGAGA
AGGCTAGGATTCTTGTAGGTGATTGCGTCGAAGACGATCTCAAACGCTTACAAATCGGTTACCCATCCTTCATGATAAGGGACACAGCAAATTATCCACCATTGATGAAG
TCAAGCAAGCTTTGCAATTCACTCAAGTATCTAGCTCAAGTGTATCTAGGATTTGATCTTCAAAATGGTATACAAGATCCTTATGAAGAATGTATCGTTGCTATGAGATT
ATACAAGAGAATGAGATCACAAGTTCATAGGAAAGAGAACTATCCAATGGCTTCTGACCCACAAAACAAAAATAATTTTGCTATTTGGAGGGAAAATGAGCTTCAAAGGA
TGAGTCCAGAACAAATGTTGGAGATTTCTAGGTCTGATTATTATTGTTGGTGCATGGATTTGAGGATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGGACTTCTTTTCACTCACATCATGAACCAACTTGTGCCATTTGCAAGAAACATTGTCGATCTCTTGATTCTCTTAGAGAACATCTCATTGGGCCACTGCCAAAACA
AGAATGCAAAAACATCTTTGCTACAAGAGGATGCAAGTTTTGCTTGGCCATCTTTGACAGTTCTTACTCACAAAGACTCCACCAAGAAAGATGCCAATTCTCTCCTGTAA
ATTCTGGACTTCTTGCTCGTTTCGCCAACTTGGGAATTCGTGACGGTTCAACCGTCATCGACAGTGGAAGAACACGAGGGTCAGGGGCCATCGCGCTAGCTTGCAAATAT
GTAGGTGGAGGAAGTGATGGGTCGATGGACATATGTGCTAAGGTTTGCCTTATTGATGAGGGTGAGAACGTCATCTTCTATAGCTATGTCAAGCCCGTAACTGCTGTTAC
AAATTATAGGTATGAAACAACTGGAATTCGTCCAGAACACATTCGAGATGCAATACCAATGAAACAAGTTCAAAAGAAAATTCAAGAAATCCTCTACAATGGAGGTGAGA
AGGCTAGGATTCTTGTAGGTGATTGCGTCGAAGACGATCTCAAACGCTTACAAATCGGTTACCCATCCTTCATGATAAGGGACACAGCAAATTATCCACCATTGATGAAG
TCAAGCAAGCTTTGCAATTCACTCAAGTATCTAGCTCAAGTGTATCTAGGATTTGATCTTCAAAATGGTATACAAGATCCTTATGAAGAATGTATCGTTGCTATGAGATT
ATACAAGAGAATGAGATCACAAGTTCATAGGAAAGAGAACTATCCAATGGCTTCTGACCCACAAAACAAAAATAATTTTGCTATTTGGAGGGAAAATGAGCTTCAAAGGA
TGAGTCCAGAACAAATGTTGGAGATTTCTAGGTCTGATTATTATTGTTGGTGCATGGATTTGAGGATTTGAGAGCTTTCATACATTCTTCAACAATGGTGGAAATTTAAT
TTGGGTTGCCACAGCCCAATTAAGTTCAAGTTCTTCATTGTCAAGCAAATATAGATTTATT
Protein sequenceShow/hide protein sequence
MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAIFDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTVIDSGRTRGSGAIALACKY
VGGGSDGSMDICAKVCLIDEGENVIFYSYVKPVTAVTNYRYETTGIRPEHIRDAIPMKQVQKKIQEILYNGGEKARILVGDCVEDDLKRLQIGYPSFMIRDTANYPPLMK
SSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKENYPMASDPQNKNNFAIWRENELQRMSPEQMLEISRSDYYCWCMDLRI