; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI05G28140 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G28140
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRNA exonuclease 4
Genome locationChr5:26670092..26672586
RNA-Seq ExpressionCSPI05G28140
SyntenyCSPI05G28140
Gene Ontology termsGO:0006364 - rRNA processing (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008408 - 3'-5' exonuclease activity (molecular function)
InterPro domainsIPR012337 - Ribonuclease H-like superfamily
IPR013520 - Exonuclease, RNase T/DNA polymerase III
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037519.1 RNA exonuclease 4 [Cucumis melo var. makuwa]5.2e-12473.7Show/hide
Query:  GPLPKQECKNIFNARGCKICLAIFESPLQLNLHQESCQLRP---INFSHENRARLGKT--ESGGAKGNNEAVALSCTMVGAGIDGSLNICVRVCVVDQNE
        GPLPKQEC+NIF  RGCK CLAI +S     LHQE CQ  P     F++    R G T  +SG  +G+  A+AL+C  VG G DGSL+IC +VC+VD+ E
Subjt:  GPLPKQECKNIFNARGCKICLAIFESPLQLNLHQESCQLRP---INFSHENRARLGKT--ESGGAKGNNEAVALSCTMVGAGIDGSLNICVRVCVVDQNE

Query:  SLIFSTYVNPTLPITNYRYEFTGVRPEHLRDAMPLKQVQKKIQEFLCNGEQMWKIRPGSTGRARILVGHGLQEYLTSLQIDYPPIMIRDTAKYPPLMKTS
        ++IF +YV P +P+TNYRYEFTGVRPEHLRDAMPLKQVQKKIQEFLCNGEQMWKIRPGST +ARILVGHGLQEYLTSLQIDYP IMIRDTAKYPPLMKTS
Subjt:  SLIFSTYVNPTLPITNYRYEFTGVRPEHLRDAMPLKQVQKKIQEFLCNGEQMWKIRPGSTGRARILVGHGLQEYLTSLQIDYPPIMIRDTAKYPPLMKTS

Query:  KLSNSLHCLTQTYLG-------------YSMENGKRLEGYEECVATMRLYMRMKSQVHKREEYPLASDPQNKFNFANWKQLELEKMTPQQLLQISRSDYY
        KLSNSLH LTQTYLG             Y+MENGK+ EGYEECVATMRLY++MKSQVHKREEYPLASDP NKFNFA WKQLELEKMTPQQLLQISRSDYY
Subjt:  KLSNSLHCLTQTYLG-------------YSMENGKRLEGYEECVATMRLYMRMKSQVHKREEYPLASDPQNKFNFANWKQLELEKMTPQQLLQISRSDYY

Query:  CWCLDSTL
        CWCLD+TL
Subjt:  CWCLDSTL

KAE8648891.1 hypothetical protein Csa_008012 [Cucumis sativus]1.8e-14093.96Show/hide
Query:  SPLQLNLHQESCQLRPINFSHENRARLGKTESGGAKGNNEAVALSCTMVGAGIDGSLNICVRVCVVDQNESLIFSTYVNPTLPITNYRYEFTGVRPEHLR
        +P   N       L  I  SHENRARLGKTESGG KGNNEAVALSCTMVGAGIDGSLNICVRVCVVDQNESLIFSTYVNPTLPITNYRYEFTGVRPEHLR
Subjt:  SPLQLNLHQESCQLRPINFSHENRARLGKTESGGAKGNNEAVALSCTMVGAGIDGSLNICVRVCVVDQNESLIFSTYVNPTLPITNYRYEFTGVRPEHLR

Query:  DAMPLKQVQKKIQEFLCNGEQMWKIRPGSTGRARILVGHGLQEYLTSLQIDYPPIMIRDTAKYPPLMKTSKLSNSLHCLTQTYLGYSMENGKRLEGYEEC
        DAMPLKQVQKKIQEFLCNGEQMWKIRPGSTGRARILVGHGLQEYLTSLQIDYPPIMIRDTAKYPPLMKTSKLSNSLHCLTQTYLGYSMENGKRLEGYEEC
Subjt:  DAMPLKQVQKKIQEFLCNGEQMWKIRPGSTGRARILVGHGLQEYLTSLQIDYPPIMIRDTAKYPPLMKTSKLSNSLHCLTQTYLGYSMENGKRLEGYEEC

Query:  VATMRLYMRMKSQVHKREEYPLASDPQNKFNFANWKQLELEKMTPQQLLQISRSDYYCWCLDSTL
        VATMRLYMRMKSQVHKREEYPLASDPQNKFNFANWKQLELEKMTPQQLLQISRSDYYCWCLDSTL
Subjt:  VATMRLYMRMKSQVHKREEYPLASDPQNKFNFANWKQLELEKMTPQQLLQISRSDYYCWCLDSTL

XP_008458921.1 PREDICTED: RNA exonuclease 4 [Cucumis melo]6.0e-12876.77Show/hide
Query:  GPLPKQECKNIFNARGCKICLAIFESPLQLNLHQESCQLRPINFSHENR-----ARLGKT--ESGGAKGNNEAVALSCTMVGAGIDGSLNICVRVCVVDQ
        GPLPKQEC+NIF  RGCK CLAI +S     LHQE CQ  P+N     R      R G T  +SG  +G+  A+AL+C  VG G DGSL+IC +VC+VD+
Subjt:  GPLPKQECKNIFNARGCKICLAIFESPLQLNLHQESCQLRPINFSHENR-----ARLGKT--ESGGAKGNNEAVALSCTMVGAGIDGSLNICVRVCVVDQ

Query:  NESLIFSTYVNPTLPITNYRYEFTGVRPEHLRDAMPLKQVQKKIQEFLCNGEQMWKIRPGSTGRARILVGHGLQEYLTSLQIDYPPIMIRDTAKYPPLMK
         E++IF +YV P +P+TNYRYEFTGVRPEHLRDAMPLKQVQKKIQEFLCNGEQMWKIRPGST +ARILVGHGLQEYLTSLQIDYP IMIRDTAKYPPLMK
Subjt:  NESLIFSTYVNPTLPITNYRYEFTGVRPEHLRDAMPLKQVQKKIQEFLCNGEQMWKIRPGSTGRARILVGHGLQEYLTSLQIDYPPIMIRDTAKYPPLMK

Query:  TSKLSNSLHCLTQTYLGYSMENGKRLEGYEECVATMRLYMRMKSQVHKREEYPLASDPQNKFNFANWKQLELEKMTPQQLLQISRSDYYCWCLDSTL
        TSKLSNSLH LTQTYLGY+MENGK+ EGYEECVATMRLY++MKSQVHKREEYPLASDP NKFNFA WKQLELEKMTPQQLLQISRSDYYCWCLD+TL
Subjt:  TSKLSNSLHCLTQTYLGYSMENGKRLEGYEECVATMRLYMRMKSQVHKREEYPLASDPQNKFNFANWKQLELEKMTPQQLLQISRSDYYCWCLDSTL

XP_011656271.2 RNA exonuclease 4 [Cucumis sativus]4.5e-16899.31Show/hide
Query:  GPLPKQECKNIFNARGCKICLAIFESPLQLNLHQESCQLRPINFSHENRARLGKTESGGAKGNNEAVALSCTMVGAGIDGSLNICVRVCVVDQNESLIFS
        GPLPKQECKNIFNARGCKICLA+FESPLQLNLHQESCQLRPINFSHENRARLGKTESGG KGNNEAVALSCTMVGAGIDGSLNICVRVCVVDQNESLIFS
Subjt:  GPLPKQECKNIFNARGCKICLAIFESPLQLNLHQESCQLRPINFSHENRARLGKTESGGAKGNNEAVALSCTMVGAGIDGSLNICVRVCVVDQNESLIFS

Query:  TYVNPTLPITNYRYEFTGVRPEHLRDAMPLKQVQKKIQEFLCNGEQMWKIRPGSTGRARILVGHGLQEYLTSLQIDYPPIMIRDTAKYPPLMKTSKLSNS
        TYVNPTLPITNYRYEFTGVRPEHLRDAMPLKQVQKKIQEFLCNGEQMWKIRPGSTGRARILVGHGLQEYLTSLQIDYPPIMIRDTAKYPPLMKTSKLSNS
Subjt:  TYVNPTLPITNYRYEFTGVRPEHLRDAMPLKQVQKKIQEFLCNGEQMWKIRPGSTGRARILVGHGLQEYLTSLQIDYPPIMIRDTAKYPPLMKTSKLSNS

Query:  LHCLTQTYLGYSMENGKRLEGYEECVATMRLYMRMKSQVHKREEYPLASDPQNKFNFANWKQLELEKMTPQQLLQISRSDYYCWCLDSTL
        LHCLTQTYLGYSMENGKRLEGYEECVATMRLYMRMKSQVHKREEYPLASDPQNKFNFANWKQLELEKMTPQQLLQISRSDYYCWCLDSTL
Subjt:  LHCLTQTYLGYSMENGKRLEGYEECVATMRLYMRMKSQVHKREEYPLASDPQNKFNFANWKQLELEKMTPQQLLQISRSDYYCWCLDSTL

XP_022990586.1 RNA exonuclease 4-like [Cucurbita maxima]1.1e-11671.38Show/hide
Query:  GPLPKQECKNIFNARGCKICLAIFESPLQLNLHQESCQLRPINFSH-----ENRARLGK-TESGGAKGNNEAVALSCTMVGAGIDGSLNICVRVCVVDQN
        GPLPKQEC NIF  RGCKICLAIFESP  L LHQE CQLR  NFS       N     K T   G    +EAVAL+C MVG G DGSL+IC RVC++D+ 
Subjt:  GPLPKQECKNIFNARGCKICLAIFESPLQLNLHQESCQLRPINFSH-----ENRARLGK-TESGGAKGNNEAVALSCTMVGAGIDGSLNICVRVCVVDQN

Query:  ESLIFSTYVNPTLPITNYRYEFTGVRPEHLRD-AMPLKQVQKKIQEFLCNGEQMWKIRPGSTGRARILVGHGLQEYLTSLQIDYPPIMIRDTAKYPPLMK
        E++IFSTYVNPTLPITNYR E TGV PE+LRD AMPLKQVQKKIQ+ LCNGE MWKIRPG  G+ARILVGHGL ++L +LQI+YPP MIRDTA YPPLMK
Subjt:  ESLIFSTYVNPTLPITNYRYEFTGVRPEHLRD-AMPLKQVQKKIQEFLCNGEQMWKIRPGSTGRARILVGHGLQEYLTSLQIDYPPIMIRDTAKYPPLMK

Query:  TSKLSNSLHCLTQTYLGYSMENGKRLEGYEECVATMRLYMRMKSQVHKREEYPLASDPQNKFNFANWKQLELEKMTPQQLLQISRSDYYCWCLDSTL
        TSKL+NSLH LTQ YLGY ++NG + + YE+CVATMRLYMRM++QVHK EEYPLASDPQNK NFA WKQ ELE+M+P+Q+L+ISRSDYYCWCLDS L
Subjt:  TSKLSNSLHCLTQTYLGYSMENGKRLEGYEECVATMRLYMRMKSQVHKREEYPLASDPQNKFNFANWKQLELEKMTPQQLLQISRSDYYCWCLDSTL

TrEMBL top hitse value%identityAlignment
A0A1S3C947 RNA exonuclease 42.9e-12876.77Show/hide
Query:  GPLPKQECKNIFNARGCKICLAIFESPLQLNLHQESCQLRPINFSHENR-----ARLGKT--ESGGAKGNNEAVALSCTMVGAGIDGSLNICVRVCVVDQ
        GPLPKQEC+NIF  RGCK CLAI +S     LHQE CQ  P+N     R      R G T  +SG  +G+  A+AL+C  VG G DGSL+IC +VC+VD+
Subjt:  GPLPKQECKNIFNARGCKICLAIFESPLQLNLHQESCQLRPINFSHENR-----ARLGKT--ESGGAKGNNEAVALSCTMVGAGIDGSLNICVRVCVVDQ

Query:  NESLIFSTYVNPTLPITNYRYEFTGVRPEHLRDAMPLKQVQKKIQEFLCNGEQMWKIRPGSTGRARILVGHGLQEYLTSLQIDYPPIMIRDTAKYPPLMK
         E++IF +YV P +P+TNYRYEFTGVRPEHLRDAMPLKQVQKKIQEFLCNGEQMWKIRPGST +ARILVGHGLQEYLTSLQIDYP IMIRDTAKYPPLMK
Subjt:  NESLIFSTYVNPTLPITNYRYEFTGVRPEHLRDAMPLKQVQKKIQEFLCNGEQMWKIRPGSTGRARILVGHGLQEYLTSLQIDYPPIMIRDTAKYPPLMK

Query:  TSKLSNSLHCLTQTYLGYSMENGKRLEGYEECVATMRLYMRMKSQVHKREEYPLASDPQNKFNFANWKQLELEKMTPQQLLQISRSDYYCWCLDSTL
        TSKLSNSLH LTQTYLGY+MENGK+ EGYEECVATMRLY++MKSQVHKREEYPLASDP NKFNFA WKQLELEKMTPQQLLQISRSDYYCWCLD+TL
Subjt:  TSKLSNSLHCLTQTYLGYSMENGKRLEGYEECVATMRLYMRMKSQVHKREEYPLASDPQNKFNFANWKQLELEKMTPQQLLQISRSDYYCWCLDSTL

A0A5A7T8A0 RNA exonuclease 42.5e-12473.7Show/hide
Query:  GPLPKQECKNIFNARGCKICLAIFESPLQLNLHQESCQLRP---INFSHENRARLGKT--ESGGAKGNNEAVALSCTMVGAGIDGSLNICVRVCVVDQNE
        GPLPKQEC+NIF  RGCK CLAI +S     LHQE CQ  P     F++    R G T  +SG  +G+  A+AL+C  VG G DGSL+IC +VC+VD+ E
Subjt:  GPLPKQECKNIFNARGCKICLAIFESPLQLNLHQESCQLRP---INFSHENRARLGKT--ESGGAKGNNEAVALSCTMVGAGIDGSLNICVRVCVVDQNE

Query:  SLIFSTYVNPTLPITNYRYEFTGVRPEHLRDAMPLKQVQKKIQEFLCNGEQMWKIRPGSTGRARILVGHGLQEYLTSLQIDYPPIMIRDTAKYPPLMKTS
        ++IF +YV P +P+TNYRYEFTGVRPEHLRDAMPLKQVQKKIQEFLCNGEQMWKIRPGST +ARILVGHGLQEYLTSLQIDYP IMIRDTAKYPPLMKTS
Subjt:  SLIFSTYVNPTLPITNYRYEFTGVRPEHLRDAMPLKQVQKKIQEFLCNGEQMWKIRPGSTGRARILVGHGLQEYLTSLQIDYPPIMIRDTAKYPPLMKTS

Query:  KLSNSLHCLTQTYLG-------------YSMENGKRLEGYEECVATMRLYMRMKSQVHKREEYPLASDPQNKFNFANWKQLELEKMTPQQLLQISRSDYY
        KLSNSLH LTQTYLG             Y+MENGK+ EGYEECVATMRLY++MKSQVHKREEYPLASDP NKFNFA WKQLELEKMTPQQLLQISRSDYY
Subjt:  KLSNSLHCLTQTYLG-------------YSMENGKRLEGYEECVATMRLYMRMKSQVHKREEYPLASDPQNKFNFANWKQLELEKMTPQQLLQISRSDYY

Query:  CWCLDSTL
        CWCLD+TL
Subjt:  CWCLDSTL

A0A5E4EQL4 RNA exonuclease 46.7e-10966.1Show/hide
Query:  GPLPKQECKNIFNARGCKICLAIFESPLQLNLHQESCQLRPINFSHENR-ARLG---KTESGGAKGNNEAVALSCTMVGAGIDGSLNICVRVCVVDQNES
        GPLPKQEC+NIF+ RGCK CLAI +SP  L +HQ+ CQL  +N     R A LG    TE+G  +G  + VAL+C MVG G DGSL++C +VC++D+ E+
Subjt:  GPLPKQECKNIFNARGCKICLAIFESPLQLNLHQESCQLRPINFSHENR-ARLG---KTESGGAKGNNEAVALSCTMVGAGIDGSLNICVRVCVVDQNES

Query:  LIFSTYVNPTLPITNYRYEFTGVRPEHLRDAMPLKQVQKKIQEFLCNGEQMWKIRPGSTGRARILVGHGLQEYLTSLQIDYPPIMIRDTAKYPPLMKTSK
        +IF +YV P LP+TNYRYE TG+RPE+LRDAMPL+QVQKKIQ+FLCNGE MWKIRP   G+ARILVGHGL   L SLQ++YP +MIRDTAKYPPLMKTSK
Subjt:  LIFSTYVNPTLPITNYRYEFTGVRPEHLRDAMPLKQVQKKIQEFLCNGEQMWKIRPGSTGRARILVGHGLQEYLTSLQIDYPPIMIRDTAKYPPLMKTSK

Query:  LSNSLHCLTQTYLGYSMENGKRLEGYEECVATMRLYMRMKSQVHKREEYPLASDPQNKFNFANWKQLELEKMTPQQLLQISRSDYYCWCLDS
        LSNSL  LTQ YLGY ++ G + + YE+CVATM+LYMRM+SQVHK E YPLASDPQN+ NFA+W+Q ELE+M+P+Q+L+ SRSDYYCWCLDS
Subjt:  LSNSLHCLTQTYLGYSMENGKRLEGYEECVATMRLYMRMKSQVHKREEYPLASDPQNKFNFANWKQLELEKMTPQQLLQISRSDYYCWCLDS

A0A6J1HBP2 RNA exonuclease 47.4e-11670.71Show/hide
Query:  GPLPKQECKNIFNARGCKICLAIFESPLQLNLHQESCQLRPINFSH-----ENRARLGK-TESGGAKGNNEAVALSCTMVGAGIDGSLNICVRVCVVDQN
        GP PKQEC N+F  RGCKICLAIFESP  L LHQE CQLR  N S       N     K T   G    +EAVAL+C MVG G DGSL+IC RVC++D+N
Subjt:  GPLPKQECKNIFNARGCKICLAIFESPLQLNLHQESCQLRPINFSH-----ENRARLGK-TESGGAKGNNEAVALSCTMVGAGIDGSLNICVRVCVVDQN

Query:  ESLIFSTYVNPTLPITNYRYEFTGVRPEHLRD-AMPLKQVQKKIQEFLCNGEQMWKIRPGSTGRARILVGHGLQEYLTSLQIDYPPIMIRDTAKYPPLMK
        E++IFSTYVNPTLPITNYR E TGV PE++RD AMPLKQVQKKIQ+ LCNGE MWKIRPG  G+ARILVGHGL ++L SLQI+YPP MIRDTA YPPLMK
Subjt:  ESLIFSTYVNPTLPITNYRYEFTGVRPEHLRD-AMPLKQVQKKIQEFLCNGEQMWKIRPGSTGRARILVGHGLQEYLTSLQIDYPPIMIRDTAKYPPLMK

Query:  TSKLSNSLHCLTQTYLGYSMENGKRLEGYEECVATMRLYMRMKSQVHKREEYPLASDPQNKFNFANWKQLELEKMTPQQLLQISRSDYYCWCLDSTL
        TSKL+NSLH LTQ YLGY ++NG + + YE+CVATMRLYMRM+SQVHK EEYPLASDPQNK NFA WKQ ELE+M+P+Q+L++SRSDYYCWCLDS L
Subjt:  TSKLSNSLHCLTQTYLGYSMENGKRLEGYEECVATMRLYMRMKSQVHKREEYPLASDPQNKFNFANWKQLELEKMTPQQLLQISRSDYYCWCLDSTL

A0A6J1JNC8 RNA exonuclease 45.1e-11771.38Show/hide
Query:  GPLPKQECKNIFNARGCKICLAIFESPLQLNLHQESCQLRPINFSH-----ENRARLGK-TESGGAKGNNEAVALSCTMVGAGIDGSLNICVRVCVVDQN
        GPLPKQEC NIF  RGCKICLAIFESP  L LHQE CQLR  NFS       N     K T   G    +EAVAL+C MVG G DGSL+IC RVC++D+ 
Subjt:  GPLPKQECKNIFNARGCKICLAIFESPLQLNLHQESCQLRPINFSH-----ENRARLGK-TESGGAKGNNEAVALSCTMVGAGIDGSLNICVRVCVVDQN

Query:  ESLIFSTYVNPTLPITNYRYEFTGVRPEHLRD-AMPLKQVQKKIQEFLCNGEQMWKIRPGSTGRARILVGHGLQEYLTSLQIDYPPIMIRDTAKYPPLMK
        E++IFSTYVNPTLPITNYR E TGV PE+LRD AMPLKQVQKKIQ+ LCNGE MWKIRPG  G+ARILVGHGL ++L +LQI+YPP MIRDTA YPPLMK
Subjt:  ESLIFSTYVNPTLPITNYRYEFTGVRPEHLRD-AMPLKQVQKKIQEFLCNGEQMWKIRPGSTGRARILVGHGLQEYLTSLQIDYPPIMIRDTAKYPPLMK

Query:  TSKLSNSLHCLTQTYLGYSMENGKRLEGYEECVATMRLYMRMKSQVHKREEYPLASDPQNKFNFANWKQLELEKMTPQQLLQISRSDYYCWCLDSTL
        TSKL+NSLH LTQ YLGY ++NG + + YE+CVATMRLYMRM++QVHK EEYPLASDPQNK NFA WKQ ELE+M+P+Q+L+ISRSDYYCWCLDS L
Subjt:  TSKLSNSLHCLTQTYLGYSMENGKRLEGYEECVATMRLYMRMKSQVHKREEYPLASDPQNKFNFANWKQLELEKMTPQQLLQISRSDYYCWCLDSTL

SwissProt top hitse value%identityAlignment
Q4WHF8 RNA exonuclease 44.4e-1731.22Show/hide
Query:  VALSCTMVGAGID-GSLNICVRVCVVDQNESLIFSTYVNPTLPITNYRYEFTGVRPEHLRDAMPLKQVQKKIQEFLCNGEQMWKIRPGSTGRARILVGHG
        VA+ C MVG G +  + +   RV +V+ N   ++ +YV P   IT++R   +G+ P+H+ +A  L+QVQK + E L                 RILVGH 
Subjt:  VALSCTMVGAGID-GSLNICVRVCVVDQNESLIFSTYVNPTLPITNYRYEFTGVRPEHLRDAMPLKQVQKKIQEFLCNGEQMWKIRPGSTGRARILVGHG

Query:  LQEYLTSLQIDYPPIMIRDTAKYPPLMK-TSKLSNSLHCLTQTYLGYSMENGKRLEGYEECVATMRLYMRMKSQVHKR--EEYPLASDPQNKFNFANWKQ
        +   L +L + +P   IRDT+K+PP  K     S  L  L   +LG ++++G      E+  ATM LY R K    +   +++P+      K N  + K+
Subjt:  LQEYLTSLQIDYPPIMIRDTAKYPPLMK-TSKLSNSLHCLTQTYLGYSMENGKRLEGYEECVATMRLYMRMKSQVHKR--EEYPLASDPQNKFNFANWKQ

Query:  LELEK
         + +K
Subjt:  LELEK

Q6DEW6 RNA exonuclease 44.0e-1832.2Show/hide
Query:  KGNNEAVALSCTMVGAGIDGSLNICVRVCVVDQNESLIFSTYVNPTLPITNYRYEFTGVRPEHLRDAMPLKQVQKKIQEFLCNGEQMWKIRPGSTGRARI
        +G    VA+ C MVG G+DG  ++  RV +V+     ++  YV PT  +T+YR   +G+RP+ +++    K VQ ++ E L               R R 
Subjt:  KGNNEAVALSCTMVGAGIDGSLNICVRVCVVDQNESLIFSTYVNPTLPITNYRYEFTGVRPEHLRDAMPLKQVQKKIQEFLCNGEQMWKIRPGSTGRARI

Query:  LVGHGLQEYLTSLQIDYPPIMIRDTAKYPPLMKTSKLSN-SLHCLTQTYLGYSMENGKRLEGYEECVATMRLYMRMK
        LVGH +   L  L +D+P   IRDT KY P  +  K    SL  L +  L   ++ G+     ++  A MRLY   K
Subjt:  LVGHGLQEYLTSLQIDYPPIMIRDTAKYPPLMKTSKLSN-SLHCLTQTYLGYSMENGKRLEGYEECVATMRLYMRMK

Q6PAQ4 RNA exonuclease 42.5e-2034.27Show/hide
Query:  GNNEAVALSCTMVGAGIDGSLNICVRVCVVDQNESLIFSTYVNPTLPITNYRYEFTGVRPEHLRDAMPLKQVQKKIQEFLCNGEQMWKIRPGSTGRARIL
        G  +A+AL C MVG G  G  +I  RV +V+Q    ++  YV PT P+T+YR   +G+RPE+L+     + V+K++ E L               + RIL
Subjt:  GNNEAVALSCTMVGAGIDGSLNICVRVCVVDQNESLIFSTYVNPTLPITNYRYEFTGVRPEHLRDAMPLKQVQKKIQEFLCNGEQMWKIRPGSTGRARIL

Query:  VGHGLQEYLTSLQIDYPPIMIRDTAKYPPLMKTSKLSN-SLHCLTQTYLGYSMENGKRLEGYEECVATMRLYMRMKSQ
        VGH L   L  L +D+P   IRDT K+ P     K    SL  L++  LG  ++  +     ++  A MRLY+ +K +
Subjt:  VGHGLQEYLTSLQIDYPPIMIRDTAKYPPLMKTSKLSN-SLHCLTQTYLGYSMENGKRLEGYEECVATMRLYMRMKSQ

Q91560 RNA exonuclease 47.3e-2034.46Show/hide
Query:  KGNNEAVALSCTMVGAGIDGSLNICVRVCVVDQNESLIFSTYVNPTLPITNYRYEFTGVRPEHLRDAMPLKQVQKKIQEFLCNGEQMWKIRPGSTGRARI
        +G    VA+ C MVG G+DG  +I  RV +V+     ++  YV PT  +T+YR   +G+RPE ++   P K VQK++ E L               R R 
Subjt:  KGNNEAVALSCTMVGAGIDGSLNICVRVCVVDQNESLIFSTYVNPTLPITNYRYEFTGVRPEHLRDAMPLKQVQKKIQEFLCNGEQMWKIRPGSTGRARI

Query:  LVGHGLQEYLTSLQIDYPPIMIRDTAKYPPLMKTSKLSN-SLHCLTQTYLGYSMENGKRLEGYEECVATMRLYMRMK
        LVGH +   L  L +D+P   IRDT KY P  +  K    SL  L +  L   ++ G+     ++  A MRLY   K
Subjt:  LVGHGLQEYLTSLQIDYPPIMIRDTAKYPPLMKTSKLSN-SLHCLTQTYLGYSMENGKRLEGYEECVATMRLYMRMK

Q9GZR2 RNA exonuclease 42.7e-2234.36Show/hide
Query:  GNNEAVALSCTMVGAGIDGSLNICVRVCVVDQNESLIFSTYVNPTLPITNYRYEFTGVRPEHLRDAMPLKQVQKKIQEFLCNGEQMWKIRPGSTGRARIL
        G   A+AL C MVG G  G  ++  RV +V+Q    ++  YV PT P+T+YR   +G+RPE+L+    L+ VQK++ E L               + RIL
Subjt:  GNNEAVALSCTMVGAGIDGSLNICVRVCVVDQNESLIFSTYVNPTLPITNYRYEFTGVRPEHLRDAMPLKQVQKKIQEFLCNGEQMWKIRPGSTGRARIL

Query:  VGHGLQEYLTSLQIDYPPIMIRDTAKYPPLMKTSKLSN-SLHCLTQTYLGYSMENGKRLEGYEECVATMRLYMRMKSQVHK--REEYPLASDPQN
        VGH L   L  L +D+P   IRDT KY P     K    SL  L++  LG  ++  +     ++  A MRLY+ +K +     R+  PL + P +
Subjt:  VGHGLQEYLTSLQIDYPPIMIRDTAKYPPLMKTSKLSN-SLHCLTQTYLGYSMENGKRLEGYEECVATMRLYMRMKSQVHK--REEYPLASDPQN

Arabidopsis top hitse value%identityAlignment
AT2G48100.1 Exonuclease family protein1.8e-6143.51Show/hide
Query:  LPKQECKNIFNARGCKICLAIFESPLQLNLHQESCQLRPINFSHENRARLGKTESGGAKGNNEAVALSCTMVGAGIDGSLNICVRVCVVDQNESLIFSTY
        L K  CK IF  RGC +CL IFE    L  H+  C L P      +  R   +   G++   +A+AL C MVG G DG+++ C  VC+VD +E++IFST+
Subjt:  LPKQECKNIFNARGCKICLAIFESPLQLNLHQESCQLRPINFSHENRARLGKTESGGAKGNNEAVALSCTMVGAGIDGSLNICVRVCVVDQNESLIFSTY

Query:  VNPTLPITNYRYEFTGVRPEHLRDAMPLKQVQKKIQEFLCNGEQMWKIRPGSTGRARILVGHGLQEYLTSLQIDYPPIMIRDTAKYPPLMKTSKLSNSLH
        V P LP+T+YR+E TG+  E L+D MPL+ V++++  FLC G+          GR  +LVGH L+  ++ L+++YP  ++RDTAKY PLMKT+ +S SL 
Subjt:  VNPTLPITNYRYEFTGVRPEHLRDAMPLKQVQKKIQEFLCNGEQMWKIRPGSTGRARILVGHGLQEYLTSLQIDYPPIMIRDTAKYPPLMKTSKLSNSLH

Query:  CLTQTYLGYSMENGKRLEGYEECVATMRLYMRMKSQVHKREEYPLASDPQNKFNFANWKQLELEKMTPQQLLQISRSDYYCWCLD
         LT++YLGY ++ GK  E YE+CV+ MRLY RM+ Q H      + S         + KQ +LEKM  ++L Q S S+Y CWCLD
Subjt:  CLTQTYLGYSMENGKRLEGYEECVATMRLYMRMKSQVHKREEYPLASDPQNKFNFANWKQLELEKMTPQQLLQISRSDYYCWCLD

AT2G48100.2 Exonuclease family protein1.8e-6143.51Show/hide
Query:  LPKQECKNIFNARGCKICLAIFESPLQLNLHQESCQLRPINFSHENRARLGKTESGGAKGNNEAVALSCTMVGAGIDGSLNICVRVCVVDQNESLIFSTY
        L K  CK IF  RGC +CL IFE    L  H+  C L P      +  R   +   G++   +A+AL C MVG G DG+++ C  VC+VD +E++IFST+
Subjt:  LPKQECKNIFNARGCKICLAIFESPLQLNLHQESCQLRPINFSHENRARLGKTESGGAKGNNEAVALSCTMVGAGIDGSLNICVRVCVVDQNESLIFSTY

Query:  VNPTLPITNYRYEFTGVRPEHLRDAMPLKQVQKKIQEFLCNGEQMWKIRPGSTGRARILVGHGLQEYLTSLQIDYPPIMIRDTAKYPPLMKTSKLSNSLH
        V P LP+T+YR+E TG+  E L+D MPL+ V++++  FLC G+          GR  +LVGH L+  ++ L+++YP  ++RDTAKY PLMKT+ +S SL 
Subjt:  VNPTLPITNYRYEFTGVRPEHLRDAMPLKQVQKKIQEFLCNGEQMWKIRPGSTGRARILVGHGLQEYLTSLQIDYPPIMIRDTAKYPPLMKTSKLSNSLH

Query:  CLTQTYLGYSMENGKRLEGYEECVATMRLYMRMKSQVHKREEYPLASDPQNKFNFANWKQLELEKMTPQQLLQISRSDYYCWCLD
         LT++YLGY ++ GK  E YE+CV+ MRLY RM+ Q H      + S         + KQ +LEKM  ++L Q S S+Y CWCLD
Subjt:  CLTQTYLGYSMENGKRLEGYEECVATMRLYMRMKSQVHKREEYPLASDPQNKFNFANWKQLELEKMTPQQLLQISRSDYYCWCLD

AT2G48100.3 Exonuclease family protein1.8e-6143.51Show/hide
Query:  LPKQECKNIFNARGCKICLAIFESPLQLNLHQESCQLRPINFSHENRARLGKTESGGAKGNNEAVALSCTMVGAGIDGSLNICVRVCVVDQNESLIFSTY
        L K  CK IF  RGC +CL IFE    L  H+  C L P      +  R   +   G++   +A+AL C MVG G DG+++ C  VC+VD +E++IFST+
Subjt:  LPKQECKNIFNARGCKICLAIFESPLQLNLHQESCQLRPINFSHENRARLGKTESGGAKGNNEAVALSCTMVGAGIDGSLNICVRVCVVDQNESLIFSTY

Query:  VNPTLPITNYRYEFTGVRPEHLRDAMPLKQVQKKIQEFLCNGEQMWKIRPGSTGRARILVGHGLQEYLTSLQIDYPPIMIRDTAKYPPLMKTSKLSNSLH
        V P LP+T+YR+E TG+  E L+D MPL+ V++++  FLC G+          GR  +LVGH L+  ++ L+++YP  ++RDTAKY PLMKT+ +S SL 
Subjt:  VNPTLPITNYRYEFTGVRPEHLRDAMPLKQVQKKIQEFLCNGEQMWKIRPGSTGRARILVGHGLQEYLTSLQIDYPPIMIRDTAKYPPLMKTSKLSNSLH

Query:  CLTQTYLGYSMENGKRLEGYEECVATMRLYMRMKSQVHKREEYPLASDPQNKFNFANWKQLELEKMTPQQLLQISRSDYYCWCLD
         LT++YLGY ++ GK  E YE+CV+ MRLY RM+ Q H      + S         + KQ +LEKM  ++L Q S S+Y CWCLD
Subjt:  CLTQTYLGYSMENGKRLEGYEECVATMRLYMRMKSQVHKREEYPLASDPQNKFNFANWKQLELEKMTPQQLLQISRSDYYCWCLD

AT3G27970.1 Exonuclease family protein3.9e-10161.09Show/hide
Query:  GPLPKQECKNIFNARGCKICLAIFESPLQLNLHQESCQLRPINFSHENR-ARLGKTESG----GAKGNNEAVALSCTMVGAGIDGSLNICVRVCVVDQNE
        GPLPKQECKNIF+ RGC+ C+ I ESP    +HQE CQ   +N     R A LG  +       +  +   VALSC MVG G DGSL++C RVC+ D+++
Subjt:  GPLPKQECKNIFNARGCKICLAIFESPLQLNLHQESCQLRPINFSHENR-ARLGKTESG----GAKGNNEAVALSCTMVGAGIDGSLNICVRVCVVDQNE

Query:  SLIFSTYVNPTLPITNYRYEFTGVRPEHLRDAMPLKQVQKKIQEFLCNGEQMWKIRPGSTGRARILVGHGLQEYLTSLQIDYPPIMIRDTAKYPPLMKTS
        ++IF TYV P++ +T+YRYE TG+RPE+LRDAMPLKQVQ+KIQEFLCNGE MWKIRP   G+ARILVGHGL   L  LQ++YP  MIRDTAKYPPLMKTS
Subjt:  SLIFSTYVNPTLPITNYRYEFTGVRPEHLRDAMPLKQVQKKIQEFLCNGEQMWKIRPGSTGRARILVGHGLQEYLTSLQIDYPPIMIRDTAKYPPLMKTS

Query:  KLSNSLHCLTQTYLGYSMENGKRLEGYEECVATMRLYMRMKSQVHKREEYPLASDPQNKFNFANWKQLELEKMTPQQLLQISRSDYYCWCLDS
        KLSNSL  LTQ YLGY +  G + + YE+CVATMRLY RM+ Q HK E YPLA+D QN+ N   W+Q E E+M+P ++L ISRSDYYCWCLDS
Subjt:  KLSNSLHCLTQTYLGYSMENGKRLEGYEECVATMRLYMRMKSQVHKREEYPLASDPQNKFNFANWKQLELEKMTPQQLLQISRSDYYCWCLDS

AT5G40310.1 Exonuclease family protein4.6e-10261.77Show/hide
Query:  GPLPKQECKNIFNARGCKICLAIFESPLQLNLHQESCQLRPINFSHENR-ARLG----KTESGGAKGNNEAVALSCTMVGAGIDGSLNICVRVCVVDQNE
        GPLPKQECKNIF+ RGC+ CL I ESP    +HQE CQL  +      R A LG     T    +  +   VALSC MVG G DGSL++C RVC+ D++E
Subjt:  GPLPKQECKNIFNARGCKICLAIFESPLQLNLHQESCQLRPINFSHENR-ARLG----KTESGGAKGNNEAVALSCTMVGAGIDGSLNICVRVCVVDQNE

Query:  SLIFSTYVNPTLPITNYRYEFTGVRPEHLRDAMPLKQVQKKIQEFLCNGEQMWKIRPGSTGRARILVGHGLQEYLTSLQIDYPPIMIRDTAKYPPLMKTS
        +++F TYV PT+P+TNYRYE TG+RPE+LRDAM LK  Q+K+QEFLCNGE MWKIRP   G+ARILVGHGL  +L SLQ++Y   MIRDTA+YPPLMK+S
Subjt:  SLIFSTYVNPTLPITNYRYEFTGVRPEHLRDAMPLKQVQKKIQEFLCNGEQMWKIRPGSTGRARILVGHGLQEYLTSLQIDYPPIMIRDTAKYPPLMKTS

Query:  KLSNSLHCLTQTYLGYSMENGKRLEGYEECVATMRLYMRMKSQVHKREEYPLASDPQNKFNFANWKQLELEKMTPQQLLQISRSDYYCWCLDS
        KLSNSL  LTQ YLGY +  G + + YE+CVATMRLY RM+ Q H+ E YPLASD QN  NFA W+Q ELE+M+P++LL +SRSDYYCWCLDS
Subjt:  KLSNSLHCLTQTYLGYSMENGKRLEGYEECVATMRLYMRMKSQVHKREEYPLASDPQNKFNFANWKQLELEKMTPQQLLQISRSDYYCWCLDS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTTCAGGGCCATTGCCAAAGCAAGAATGCAAAAACATATTCAATGCAAGAGGATGCAAAATCTGCTTAGCCATCTTTGAGAGTCCACTCCAGCTCAACCTTCACCA
AGAAAGTTGCCAACTTAGGCCTATAAATTTTAGTCATGAAAATAGGGCACGTTTGGGGAAGACAGAAAGTGGTGGAGCAAAAGGCAATAACGAAGCAGTGGCATTGAGTT
GCACCATGGTGGGCGCTGGCATCGACGGCTCCCTAAATATTTGCGTTAGGGTTTGTGTTGTTGACCAGAACGAGTCCCTCATCTTTTCTACTTATGTCAACCCAACCCTT
CCCATCACAAACTATAGGTATGAATTCACAGGTGTTCGTCCAGAACACTTGAGAGATGCAATGCCATTGAAGCAAGTCCAGAAGAAAATTCAAGAGTTTCTATGCAATGG
AGAACAAATGTGGAAGATTCGTCCTGGATCTACTGGAAGAGCAAGAATTCTTGTGGGTCATGGCCTTCAAGAATACCTTACATCTTTGCAAATTGACTACCCTCCCATTA
TGATCAGGGATACTGCTAAATATCCACCATTGATGAAGACAAGCAAGCTAAGCAATTCTCTCCACTGTTTGACACAAACATATCTTGGATACAGTATGGAAAATGGGAAG
AGATTAGAAGGTTATGAGGAGTGTGTTGCAACAATGAGATTGTACATGAGAATGAAATCTCAAGTTCACAAAAGAGAGGAATATCCATTGGCTTCTGATCCACAAAATAA
GTTTAATTTTGCAAATTGGAAGCAACTTGAGCTTGAGAAGATGACACCCCAACAGTTGTTGCAAATTTCAAGATCTGATTACTATTGTTGGTGTTTGGATTCCACCCTTT
AA
mRNA sequenceShow/hide mRNA sequence
ATGTTTTCAGGGCCATTGCCAAAGCAAGAATGCAAAAACATATTCAATGCAAGAGGATGCAAAATCTGCTTAGCCATCTTTGAGAGTCCACTCCAGCTCAACCTTCACCA
AGAAAGTTGCCAACTTAGGCCTATAAATTTTAGTCATGAAAATAGGGCACGTTTGGGGAAGACAGAAAGTGGTGGAGCAAAAGGCAATAACGAAGCAGTGGCATTGAGTT
GCACCATGGTGGGCGCTGGCATCGACGGCTCCCTAAATATTTGCGTTAGGGTTTGTGTTGTTGACCAGAACGAGTCCCTCATCTTTTCTACTTATGTCAACCCAACCCTT
CCCATCACAAACTATAGGTATGAATTCACAGGTGTTCGTCCAGAACACTTGAGAGATGCAATGCCATTGAAGCAAGTCCAGAAGAAAATTCAAGAGTTTCTATGCAATGG
AGAACAAATGTGGAAGATTCGTCCTGGATCTACTGGAAGAGCAAGAATTCTTGTGGGTCATGGCCTTCAAGAATACCTTACATCTTTGCAAATTGACTACCCTCCCATTA
TGATCAGGGATACTGCTAAATATCCACCATTGATGAAGACAAGCAAGCTAAGCAATTCTCTCCACTGTTTGACACAAACATATCTTGGATACAGTATGGAAAATGGGAAG
AGATTAGAAGGTTATGAGGAGTGTGTTGCAACAATGAGATTGTACATGAGAATGAAATCTCAAGTTCACAAAAGAGAGGAATATCCATTGGCTTCTGATCCACAAAATAA
GTTTAATTTTGCAAATTGGAAGCAACTTGAGCTTGAGAAGATGACACCCCAACAGTTGTTGCAAATTTCAAGATCTGATTACTATTGTTGGTGTTTGGATTCCACCCTTT
AA
Protein sequenceShow/hide protein sequence
MFSGPLPKQECKNIFNARGCKICLAIFESPLQLNLHQESCQLRPINFSHENRARLGKTESGGAKGNNEAVALSCTMVGAGIDGSLNICVRVCVVDQNESLIFSTYVNPTL
PITNYRYEFTGVRPEHLRDAMPLKQVQKKIQEFLCNGEQMWKIRPGSTGRARILVGHGLQEYLTSLQIDYPPIMIRDTAKYPPLMKTSKLSNSLHCLTQTYLGYSMENGK
RLEGYEECVATMRLYMRMKSQVHKREEYPLASDPQNKFNFANWKQLELEKMTPQQLLQISRSDYYCWCLDSTL