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CSPI05G28400 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G28400
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionFerredoxin-thioredoxin reductase catalytic chain, chloroplastic
Genome locationChr5:26837172..26839639
RNA-Seq ExpressionCSPI05G28400
SyntenyCSPI05G28400
Gene Ontology termsGO:0016730 - oxidoreductase activity, acting on iron-sulfur proteins as donors (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
GO:0103012 - ferredoxin-thioredoxin reductase activity (molecular function)
InterPro domainsIPR004209 - Ferredoxin thioredoxin reductase catalytic beta subunit
IPR036644 - Ferredoxin thioredoxin reductase catalytic beta subunit superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004142346.1 ferredoxin-thioredoxin reductase catalytic chain, chloroplastic [Cucumis sativus]1.5e-79100Show/hide
Query:  MILQASSFNIAVPLYGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW
        MILQASSFNIAVPLYGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW
Subjt:  MILQASSFNIAVPLYGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW

Query:  NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM
        NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM
Subjt:  NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM

XP_008458720.1 PREDICTED: ferredoxin-thioredoxin reductase catalytic chain, chloroplastic [Cucumis melo]1.6e-7899.31Show/hide
Query:  MILQASSFNIAVPLYGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW
        MILQASSFNIAVPL GSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW
Subjt:  MILQASSFNIAVPLYGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW

Query:  NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM
        NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM
Subjt:  NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM

XP_022939771.1 ferredoxin-thioredoxin reductase catalytic chain, chloroplastic-like [Cucurbita moschata]4.9e-7596.53Show/hide
Query:  MILQASSFNIAVPLYGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW
        MI QASSFNIAVPL GS LG SRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW
Subjt:  MILQASSFNIAVPLYGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW

Query:  NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM
        NCPCVPMRERKECHCMLFLTPENDFAG DQAISLEDIRATTANM
Subjt:  NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM

XP_022989856.1 ferredoxin-thioredoxin reductase catalytic chain, chloroplastic-like [Cucurbita maxima]6.0e-7393.06Show/hide
Query:  MILQASSFNIAVPLYGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW
        MILQASSFNIAVPL GSS G SRH HVVRAQ EPS+KSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDK AEVAQGFW
Subjt:  MILQASSFNIAVPLYGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW

Query:  NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM
        NCPCVPMRERKECHCMLFLTPENDFAGNDQ I+LEDI+ATTANM
Subjt:  NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM

XP_038891226.1 ferredoxin-thioredoxin reductase catalytic chain, chloroplastic [Benincasa hispida]5.3e-7797.92Show/hide
Query:  MILQASSFNIAVPLYGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW
        MILQASSFNIAVPL GS L CSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW
Subjt:  MILQASSFNIAVPLYGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW

Query:  NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM
        NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM
Subjt:  NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM

TrEMBL top hitse value%identityAlignment
A0A0A0KTZ8 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic7.2e-80100Show/hide
Query:  MILQASSFNIAVPLYGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW
        MILQASSFNIAVPLYGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW
Subjt:  MILQASSFNIAVPLYGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW

Query:  NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM
        NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM
Subjt:  NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM

A0A1S3C819 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic7.9e-7999.31Show/hide
Query:  MILQASSFNIAVPLYGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW
        MILQASSFNIAVPL GSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW
Subjt:  MILQASSFNIAVPLYGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW

Query:  NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM
        NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM
Subjt:  NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM

A0A5A7T273 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic7.9e-7999.31Show/hide
Query:  MILQASSFNIAVPLYGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW
        MILQASSFNIAVPL GSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW
Subjt:  MILQASSFNIAVPLYGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW

Query:  NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM
        NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM
Subjt:  NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM

A0A6J1FGU2 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic2.4e-7596.53Show/hide
Query:  MILQASSFNIAVPLYGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW
        MI QASSFNIAVPL GS LG SRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW
Subjt:  MILQASSFNIAVPLYGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW

Query:  NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM
        NCPCVPMRERKECHCMLFLTPENDFAG DQAISLEDIRATTANM
Subjt:  NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM

A0A6J1JZ73 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic2.4e-7596.53Show/hide
Query:  MILQASSFNIAVPLYGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW
        MI QASSFNIAVPL GS LG SRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW
Subjt:  MILQASSFNIAVPLYGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW

Query:  NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM
        NCPCVPMRERKECHCMLFLTPENDFAG DQAISLEDIRATTANM
Subjt:  NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM

SwissProt top hitse value%identityAlignment
O49856 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic3.7e-6579.86Show/hide
Query:  MILQASSFNIAVPLYGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW
        M  QAS+F +AVP   +     R+  VVRAQAEPS+KSVEIMRKFSEQYARKSGTYFCVDKGVT+VVIKGLADHKDTLGAPLCPCRHYDDK AEVAQGFW
Subjt:  MILQASSFNIAVPLYGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW

Query:  NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM
        NCPCVPMRERKECHCMLFLTP+NDFAGN+Q I+L++I+ +TANM
Subjt:  NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM

P41347 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic5.5e-5373.88Show/hide
Query:  PLYGSSLGCSRHRHVVRAQA----EPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMR
        PL  ++ G  R R  VRAQA      ++KSVE+MRKFSEQYAR+S T+FC DK VTAVVIKGLADH+DTLGAPLCPCRHYDDK AEVAQGFWNCPCVPMR
Subjt:  PLYGSSLGCSRHRHVVRAQA----EPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMR

Query:  ERKECHCMLFLTPENDFAGNDQAISLEDIRATTA
        ERKECHCMLFLTP+NDFAG DQ IS E+I+  T+
Subjt:  ERKECHCMLFLTPENDFAGNDQAISLEDIRATTA

P41348 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic6.3e-5770.5Show/hide
Query:  SSFNIAVPLYGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCV
        +S   + P+   +    R   V+RAQA+PS+KS+E+MRKFSEQ+ RKS TYFCVDK VTAVVIKGLADH+DTLGAPLCPCRHYDDK AE  QGFWNCPCV
Subjt:  SSFNIAVPLYGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCV

Query:  PMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM
        PMRERKECHCMLFLTP+NDFAG +Q I+L++IR  T+NM
Subjt:  PMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM

P41349 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic6.3e-5781.15Show/hide
Query:  RHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMRERKECHCMLFLTPE
        R + V+ ++ EPS+KSVEIMRKFSEQYARKSGTYFCVDKGVT+VVIKGLA+HKD+LGAPLCPCR+YDDK AE  QGFWNCPCVPMRERKECHCMLFLTPE
Subjt:  RHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMRERKECHCMLFLTPE

Query:  NDFAGNDQAISLEDIRATTANM
        NDFAG DQ I L++IR  TANM
Subjt:  NDFAGNDQAISLEDIRATTANM

Q9SJ89 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic1.1e-5873.97Show/hide
Query:  MILQA--SSFNIAVPLYGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQG
        M LQA   SF       G +   S  R V+RA+ EPSEKSVEIMRKFSEQYAR+SGTYFCVDKGVT+VVIKGLA+HKD+ GAPLCPCRHYDDK AEV QG
Subjt:  MILQA--SSFNIAVPLYGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQG

Query:  FWNCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM
        FWNCPCVPMRERKECHCMLFLTP+NDFAG DQ I+ ++I+ TTANM
Subjt:  FWNCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM

Arabidopsis top hitse value%identityAlignment
AT2G04700.1 ferredoxin thioredoxin reductase catalytic beta chain family protein8.2e-6073.97Show/hide
Query:  MILQA--SSFNIAVPLYGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQG
        M LQA   SF       G +   S  R V+RA+ EPSEKSVEIMRKFSEQYAR+SGTYFCVDKGVT+VVIKGLA+HKD+ GAPLCPCRHYDDK AEV QG
Subjt:  MILQA--SSFNIAVPLYGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQG

Query:  FWNCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM
        FWNCPCVPMRERKECHCMLFLTP+NDFAG DQ I+ ++I+ TTANM
Subjt:  FWNCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTCTACAAGCTTCATCCTTCAATATCGCCGTTCCACTCTACGGTTCCTCCCTCGGATGTTCCCGTCACCGCCATGTTGTACGAGCTCAAGCGGAACCATCCGAGAA
GTCGGTTGAAATAATGAGGAAATTCTCGGAGCAGTATGCCCGTAAGTCAGGAACCTATTTCTGTGTAGACAAGGGGGTTACTGCTGTTGTAATCAAGGGACTGGCAGATC
ACAAAGATACACTGGGAGCACCACTTTGTCCTTGTCGGCATTATGATGACAAACCTGCTGAGGTTGCACAAGGTTTTTGGAACTGTCCATGTGTGCCAATGAGAGAGAGG
AAAGAGTGTCACTGCATGCTTTTCCTGACTCCGGAAAATGACTTTGCCGGCAATGATCAGGCAATCTCTTTGGAAGATATCAGGGCAACAACAGCAAACATGTAA
mRNA sequenceShow/hide mRNA sequence
TGATATTTTGCAAATGAGTGGAGGGCACCCGGTAATGGCATCCTCCAGAAAATTCACTTCTATCAATCATCTTCATCTCCCTAATTCAACATTCTTTTACCCAAAAAAAA
CAGAAAAACTATAGAAAAATCCTCAAGATCCTAATGATTCTACAAGCTTCATCCTTCAATATCGCCGTTCCACTCTACGGTTCCTCCCTCGGATGTTCCCGTCACCGCCA
TGTTGTACGAGCTCAAGCGGAACCATCCGAGAAGTCGGTTGAAATAATGAGGAAATTCTCGGAGCAGTATGCCCGTAAGTCAGGAACCTATTTCTGTGTAGACAAGGGGG
TTACTGCTGTTGTAATCAAGGGACTGGCAGATCACAAAGATACACTGGGAGCACCACTTTGTCCTTGTCGGCATTATGATGACAAACCTGCTGAGGTTGCACAAGGTTTT
TGGAACTGTCCATGTGTGCCAATGAGAGAGAGGAAAGAGTGTCACTGCATGCTTTTCCTGACTCCGGAAAATGACTTTGCCGGCAATGATCAGGCAATCTCTTTGGAAGA
TATCAGGGCAACAACAGCAAACATGTAACCCCAAATTACCACTTGTTATTTTTCATTGAACAGTAATTCATATTGTGGTTATGGCTAAAACAGGTGGAAATATACAAGTA
TTAAATGAATGTGTATGTAACAGTAACTCTATATGCTGATGAGATAATGAATGGTTTCCCATATCTGCTTCTGACAAATGATTGGATTTCATTTCACCAAATACTGTTTG
GGTTGACTTTCTAAGATTTTTTACACACTTATGAAGTCAATCTAAAGATATATTGAATCTCCTATTGTTATATAAGTTTTGATGGTCC
Protein sequenceShow/hide protein sequence
MILQASSFNIAVPLYGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMRER
KECHCMLFLTPENDFAGNDQAISLEDIRATTANM