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CSPI05G28930 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G28930
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionprotein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1
Genome locationChr5:27315866..27318131
RNA-Seq ExpressionCSPI05G28930
SyntenyCSPI05G28930
Gene Ontology termsGO:0000741 - karyogamy (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR033251 - Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial
IPR043459 - NFD6/NOXY2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039497.1 protein NUCLEAR FUSION DEFECTIVE 6 [Cucumis melo var. makuwa]1.4e-3390.22Show/hide
Query:  MASFAARSIFRSSSAKAATLLSAGARAAPASSPFRIASKRPFSHCSFRLPIEMSFCVESMLPFHSATSSALMTSMLSVSPHSFGWLSEVSGL
        MASFAAR+IFRSSS KAATLLSAGARAAPA SPFRIASKRPFSH SFR+PIEMSFCVESMLPFHSATSSALMTSMLSVSPHS+GWLSE + L
Subjt:  MASFAARSIFRSSSAKAATLLSAGARAAPASSPFRIASKRPFSHCSFRLPIEMSFCVESMLPFHSATSSALMTSMLSVSPHSFGWLSEVSGL

XP_004148697.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X1 [Cucumis sativus]7.6e-4098.95Show/hide
Query:  MASFAARSIFRSSSAKAATLLSAGARAAPASSPFRIASKRPFSHCSFRLPIEMSFCVESMLPFHSATSSALMTSMLSVSPHSFGWLSEVSGLQTS
        MASFAARSIFRSSSAKAATLLSAGARAAPASSPFRIASKRPFSHCSFRLPIE+SFCVESMLPFHSATSSALMTSMLSVSPHSFGWLSEVSGLQTS
Subjt:  MASFAARSIFRSSSAKAATLLSAGARAAPASSPFRIASKRPFSHCSFRLPIEMSFCVESMLPFHSATSSALMTSMLSVSPHSFGWLSEVSGLQTS

XP_004148698.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X2 [Cucumis sativus]1.3e-3698.88Show/hide
Query:  MASFAARSIFRSSSAKAATLLSAGARAAPASSPFRIASKRPFSHCSFRLPIEMSFCVESMLPFHSATSSALMTSMLSVSPHSFGWLSEV
        MASFAARSIFRSSSAKAATLLSAGARAAPASSPFRIASKRPFSHCSFRLPIE+SFCVESMLPFHSATSSALMTSMLSVSPHSFGWLSEV
Subjt:  MASFAARSIFRSSSAKAATLLSAGARAAPASSPFRIASKRPFSHCSFRLPIEMSFCVESMLPFHSATSSALMTSMLSVSPHSFGWLSEV

XP_008459321.1 PREDICTED: protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Cucumis melo]1.3e-3692.63Show/hide
Query:  MASFAARSIFRSSSAKAATLLSAGARAAPASSPFRIASKRPFSHCSFRLPIEMSFCVESMLPFHSATSSALMTSMLSVSPHSFGWLSEVSGLQTS
        MASFAAR+IFRSSS K ATLLSAGARAAPA SPFRIASKRPFSH SFR+PIEMSFCVESMLPFHSATSSALMTSMLSVSPHS+GWLSEVSGLQTS
Subjt:  MASFAARSIFRSSSAKAATLLSAGARAAPASSPFRIASKRPFSHCSFRLPIEMSFCVESMLPFHSATSSALMTSMLSVSPHSFGWLSEVSGLQTS

XP_008459322.1 PREDICTED: protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 [Cucumis melo]2.4e-3392.13Show/hide
Query:  MASFAARSIFRSSSAKAATLLSAGARAAPASSPFRIASKRPFSHCSFRLPIEMSFCVESMLPFHSATSSALMTSMLSVSPHSFGWLSEV
        MASFAAR+IFRSSS K ATLLSAGARAAPA SPFRIASKRPFSH SFR+PIEMSFCVESMLPFHSATSSALMTSMLSVSPHS+GWLSEV
Subjt:  MASFAARSIFRSSSAKAATLLSAGARAAPASSPFRIASKRPFSHCSFRLPIEMSFCVESMLPFHSATSSALMTSMLSVSPHSFGWLSEV

TrEMBL top hitse value%identityAlignment
A0A0A0KVK4 Uncharacterized protein6.5e-3798.88Show/hide
Query:  MASFAARSIFRSSSAKAATLLSAGARAAPASSPFRIASKRPFSHCSFRLPIEMSFCVESMLPFHSATSSALMTSMLSVSPHSFGWLSEV
        MASFAARSIFRSSSAKAATLLSAGARAAPASSPFRIASKRPFSHCSFRLPIE+SFCVESMLPFHSATSSALMTSMLSVSPHSFGWLSEV
Subjt:  MASFAARSIFRSSSAKAATLLSAGARAAPASSPFRIASKRPFSHCSFRLPIEMSFCVESMLPFHSATSSALMTSMLSVSPHSFGWLSEV

A0A1S3C9E2 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X21.1e-3392.13Show/hide
Query:  MASFAARSIFRSSSAKAATLLSAGARAAPASSPFRIASKRPFSHCSFRLPIEMSFCVESMLPFHSATSSALMTSMLSVSPHSFGWLSEV
        MASFAAR+IFRSSS K ATLLSAGARAAPA SPFRIASKRPFSH SFR+PIEMSFCVESMLPFHSATSSALMTSMLSVSPHS+GWLSEV
Subjt:  MASFAARSIFRSSSAKAATLLSAGARAAPASSPFRIASKRPFSHCSFRLPIEMSFCVESMLPFHSATSSALMTSMLSVSPHSFGWLSEV

A0A1S3CB40 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X16.5e-3792.63Show/hide
Query:  MASFAARSIFRSSSAKAATLLSAGARAAPASSPFRIASKRPFSHCSFRLPIEMSFCVESMLPFHSATSSALMTSMLSVSPHSFGWLSEVSGLQTS
        MASFAAR+IFRSSS K ATLLSAGARAAPA SPFRIASKRPFSH SFR+PIEMSFCVESMLPFHSATSSALMTSMLSVSPHS+GWLSEVSGLQTS
Subjt:  MASFAARSIFRSSSAKAATLLSAGARAAPASSPFRIASKRPFSHCSFRLPIEMSFCVESMLPFHSATSSALMTSMLSVSPHSFGWLSEVSGLQTS

A0A5A7TDD1 Protein NUCLEAR FUSION DEFECTIVE 66.7e-3490.22Show/hide
Query:  MASFAARSIFRSSSAKAATLLSAGARAAPASSPFRIASKRPFSHCSFRLPIEMSFCVESMLPFHSATSSALMTSMLSVSPHSFGWLSEVSGL
        MASFAAR+IFRSSS KAATLLSAGARAAPA SPFRIASKRPFSH SFR+PIEMSFCVESMLPFHSATSSALMTSMLSVSPHS+GWLSE + L
Subjt:  MASFAARSIFRSSSAKAATLLSAGARAAPASSPFRIASKRPFSHCSFRLPIEMSFCVESMLPFHSATSSALMTSMLSVSPHSFGWLSEVSGL

A0A5D3CTR8 Protein NUCLEAR FUSION DEFECTIVE 61.1e-3393.18Show/hide
Query:  MASFAARSIFRSSSAKAATLLSAGARAAPASSPFRIASKRPFSHCSFRLPIEMSFCVESMLPFHSATSSALMTSMLSVSPHSFGWLSE
        MASFAAR+IFRSSS KAATLLSAGARAAPA SPFRIASKRPFSH SFR+PIEMSFCVESMLPFHSATSSALMTSMLSVSPHS+GWLSE
Subjt:  MASFAARSIFRSSSAKAATLLSAGARAAPASSPFRIASKRPFSHCSFRLPIEMSFCVESMLPFHSATSSALMTSMLSVSPHSFGWLSE

SwissProt top hitse value%identityAlignment
Q93ZJ3 Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial1.0e-1045.88Show/hide
Query:  ARSIFRSSSAKAATLLSAGARAAPASSP--FRIASKRPFSHCSFRLPIEMSFCVESMLPFHSATSSALMTSMLSVSPHSFGWLSE
        ARS+ R++S+++A   +    +   S+P  FR  ++R       R P+E+SFCVES+LP+HSAT+SALMTS LS+S  ++GWLS+
Subjt:  ARSIFRSSSAKAATLLSAGARAAPASSP--FRIASKRPFSHCSFRLPIEMSFCVESMLPFHSATSSALMTSMLSVSPHSFGWLSE

Arabidopsis top hitse value%identityAlignment
AT2G20585.1 nuclear fusion defective 67.2e-1245.88Show/hide
Query:  ARSIFRSSSAKAATLLSAGARAAPASSP--FRIASKRPFSHCSFRLPIEMSFCVESMLPFHSATSSALMTSMLSVSPHSFGWLSE
        ARS+ R++S+++A   +    +   S+P  FR  ++R       R P+E+SFCVES+LP+HSAT+SALMTS LS+S  ++GWLS+
Subjt:  ARSIFRSSSAKAATLLSAGARAAPASSP--FRIASKRPFSHCSFRLPIEMSFCVESMLPFHSATSSALMTSMLSVSPHSFGWLSE

AT2G20585.2 nuclear fusion defective 67.2e-1245.88Show/hide
Query:  ARSIFRSSSAKAATLLSAGARAAPASSP--FRIASKRPFSHCSFRLPIEMSFCVESMLPFHSATSSALMTSMLSVSPHSFGWLSE
        ARS+ R++S+++A   +    +   S+P  FR  ++R       R P+E+SFCVES+LP+HSAT+SALMTS LS+S  ++GWLS+
Subjt:  ARSIFRSSSAKAATLLSAGARAAPASSP--FRIASKRPFSHCSFRLPIEMSFCVESMLPFHSATSSALMTSMLSVSPHSFGWLSE

AT2G20585.3 nuclear fusion defective 67.2e-1245.88Show/hide
Query:  ARSIFRSSSAKAATLLSAGARAAPASSP--FRIASKRPFSHCSFRLPIEMSFCVESMLPFHSATSSALMTSMLSVSPHSFGWLSE
        ARS+ R++S+++A   +    +   S+P  FR  ++R       R P+E+SFCVES+LP+HSAT+SALMTS LS+S  ++GWLS+
Subjt:  ARSIFRSSSAKAATLLSAGARAAPASSP--FRIASKRPFSHCSFRLPIEMSFCVESMLPFHSATSSALMTSMLSVSPHSFGWLSE

AT2G33847.1 unknown protein7.2e-1250Show/hide
Query:  AARSIFRSSSAKAATLLSAGARAAPAS--SPFRIASKRPFSHCSFRLPIEMSFCVESMLPFHSATSSALMTSMLSVSPHS
        AARS+FRS   +AA       +  P+S  S F++  + P SH  FR P+E+S CVE+MLP+H+AT+SAL+ SMLSVS  S
Subjt:  AARSIFRSSSAKAATLLSAGARAAPAS--SPFRIASKRPFSHCSFRLPIEMSFCVESMLPFHSATSSALMTSMLSVSPHS

AT2G33847.2 unknown protein7.2e-1250Show/hide
Query:  AARSIFRSSSAKAATLLSAGARAAPAS--SPFRIASKRPFSHCSFRLPIEMSFCVESMLPFHSATSSALMTSMLSVSPHS
        AARS+FRS   +AA       +  P+S  S F++  + P SH  FR P+E+S CVE+MLP+H+AT+SAL+ SMLSVS  S
Subjt:  AARSIFRSSSAKAATLLSAGARAAPAS--SPFRIASKRPFSHCSFRLPIEMSFCVESMLPFHSATSSALMTSMLSVSPHS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCTTTGCCGCCAGGTCCATTTTTCGATCCTCCTCCGCCAAGGCTGCCACTCTTCTCAGCGCCGGAGCCAGAGCTGCTCCGGCTTCTTCACCATTTCGCATTGC
TTCCAAACGACCTTTCTCTCACTGCTCTTTTAGGCTTCCGATTGAAATGAGCTTCTGCGTCGAGTCCATGCTTCCCTTCCATTCTGCAACTTCTTCGGCATTAATGACTT
CGATGCTTTCTGTTTCTCCCCATAGCTTTGGTTGGCTTTCAGAAGTGTCTGGCTTGCAAACTTCATGA
mRNA sequenceShow/hide mRNA sequence
TTTAATTATGTTGAATTGAATAAAAGAAGGAAGAAGAAAGGGAGGAAAAATGAAATCCCCGGTTTTGTGTAGAGCGGCGGCCAAGGTTTAGCATTTCATTGCCCTAAATC
GCTCCCTTCTTCCCTTTCTTTCCATTTACCCATGGCTTCCTTTGCCGCCAGGTCCATTTTTCGATCCTCCTCCGCCAAGGCTGCCACTCTTCTCAGCGCCGGAGCCAGAG
CTGCTCCGGCTTCTTCACCATTTCGCATTGCTTCCAAACGACCTTTCTCTCACTGCTCTTTTAGGCTTCCGATTGAAATGAGCTTCTGCGTCGAGTCCATGCTTCCCTTC
CATTCTGCAACTTCTTCGGCATTAATGACTTCGATGCTTTCTGTTTCTCCCCATAGCTTTGGTTGGCTTTCAGAAGTGTCTGGCTTGCAAACTTCATGATATATGATGAT
GATTGGATAAGGTTTTGACCACCTGGGCAACAACATATTCTATTCAACCTGACTTGGCGATCTTATATATTGAATTCTGTTTCCTCAGCAAAGCATATGGTTGAGATTCC
CCATAGAAACATGAGCAACAGTTTTGCTAGGATTGTCTTGTGTTTTAGTGACTTCAAAAATTGTTCTCTCGTGGTTAATTTATGGTTTTAATGATGTTAAAAAGGAAAAG
GAAAAGAGTTGAAGTGGAATGTGAATGAAAAAGAAGATATTAAGGTCGTGTTTATTCCTGGTGAAACATAATCAATCAAAAGTATTCTAAAAGATGCGTCTTATTTCGTT
AGATTTGTTTTGTTACTTATGTTTTGTAATGGTAATGAATTGAAGGAACATAGCTTGCAAATTTGTTATAAAAATGTGTGCAATCTGATTGAAGAAGATAGGGGTG
Protein sequenceShow/hide protein sequence
MASFAARSIFRSSSAKAATLLSAGARAAPASSPFRIASKRPFSHCSFRLPIEMSFCVESMLPFHSATSSALMTSMLSVSPHSFGWLSEVSGLQTS