; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI05G29220 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G29220
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRibosomal protein
Genome locationChr5:27544091..27545095
RNA-Seq ExpressionCSPI05G29220
SyntenyCSPI05G29220
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0008097 - 5S rRNA binding (molecular function)
InterPro domainsIPR005484 - Ribosomal protein L18


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008459355.1 PREDICTED: uncharacterized protein LOC103498514 [Cucumis melo]2.9e-17193.6Show/hide
Query:  MFLRRGFAFTSPQFVLRACSFCSKAFPGGSIGSENERVAHSNSIANGSCRPQLTPLFPDDKPCSVAYDVELVDDDTWAVSCGLARAWEAREKGWSGFENR
        MFLRRGFAFTSPQ VLRACSFCSKAFPGGSIGSENERVAHSNSIANGS RPQLTPLFPDDKP SVAYD+ELVDDDTWAVSCGLARAWE REKGWSG ENR
Subjt:  MFLRRGFAFTSPQFVLRACSFCSKAFPGGSIGSENERVAHSNSIANGSCRPQLTPLFPDDKPCSVAYDVELVDDDTWAVSCGLARAWEAREKGWSGFENR

Query:  YSLEDEAHDPVDYCDSDFDDIDNMRIRGNLFYKLDQASKEFEECSLDFHRKKKSLKEKEDMVKRRSKVNDKLDKCLASGQVKLPEHLKNKYVIVERENDD
        YSLEDEAHDPVDYCDSDFDDIDNMRIRGNLFYKLD+ SKEF+E SLDFHRKKKS+KEKE+  K RSKVNDKLDKCL SGQVKLPEHLKNKYVIVERENDD
Subjt:  YSLEDEAHDPVDYCDSDFDDIDNMRIRGNLFYKLDQASKEFEECSLDFHRKKKSLKEKEDMVKRRSKVNDKLDKCLASGQVKLPEHLKNKYVIVERENDD

Query:  VEKKLRTPTFNQLTSPYHEPFCLDIFISKASVRACIIHRVTSKVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRALGDDIHNLIYTPRKGERIEGK
        VEKKLRTPTFNQLT  YHEPFCLDI+ISKASVRACIIHRVTSKVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRAL DDIHNLIYTPRKGERIEGK
Subjt:  VEKKLRTPTFNQLTSPYHEPFCLDIFISKASVRACIIHRVTSKVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRALGDDIHNLIYTPRKGERIEGK

Query:  LQIVLQSVIDNGINVKVKIKQQKRPRKL
        LQ+VLQSVIDNGINVKVKIKQQKRPRKL
Subjt:  LQIVLQSVIDNGINVKVKIKQQKRPRKL

XP_011656005.1 uncharacterized protein LOC101213193 [Cucumis sativus]3.4e-18899.7Show/hide
Query:  MFLRRGFAFTSPQFVLRACSFCSKAFPGGSIGSENERVAHSNSIANGSCRPQLTPLFPDDKPCSVAYDVELVDDDTWAVSCGLARAWEAREKGWSGFENR
        MFLRRGFAFTSPQFVLRACSFCSKAFPGGSIGSENERVAHSNSIANGSCRPQLTPLFPDDKPCSVAYDVELVDDDTWAVSCGLARAWEAREKGWSGFENR
Subjt:  MFLRRGFAFTSPQFVLRACSFCSKAFPGGSIGSENERVAHSNSIANGSCRPQLTPLFPDDKPCSVAYDVELVDDDTWAVSCGLARAWEAREKGWSGFENR

Query:  YSLEDEAHDPVDYCDSDFDDIDNMRIRGNLFYKLDQASKEFEECSLDFHRKKKSLKEKEDMVKRRSKVNDKLDKCLASGQVKLPEHLKNKYVIVERENDD
        YSLEDEAHDPVDYCDSDFDDIDNMRIRGNLFYKLDQASKEFEECSLDFHRKKKSLKEKEDMVKRRSKVNDKLDKCLASGQVKLPEHLKNKYVIVERENDD
Subjt:  YSLEDEAHDPVDYCDSDFDDIDNMRIRGNLFYKLDQASKEFEECSLDFHRKKKSLKEKEDMVKRRSKVNDKLDKCLASGQVKLPEHLKNKYVIVERENDD

Query:  VEKKLRTPTFNQLTSPYHEPFCLDIFISKASVRACIIHRVTSKVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRALGDDIHNLIYTPRKGERIEGK
        VEKKLRTPTFNQLTSPYHEPFCLDIFISKASVRACIIHRVTSKVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRALGDDIHNLIYTPRKGERIEGK
Subjt:  VEKKLRTPTFNQLTSPYHEPFCLDIFISKASVRACIIHRVTSKVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRALGDDIHNLIYTPRKGERIEGK

Query:  LQIVLQSVIDNGINVKVKIKQQKRPRKLGRPPLA
        LQIVLQSVIDNGINV VKIKQQKRPRKLGRPPLA
Subjt:  LQIVLQSVIDNGINVKVKIKQQKRPRKLGRPPLA

XP_022138029.1 uncharacterized protein LOC111009286 [Momordica charantia]4.5e-15684.43Show/hide
Query:  MFLRRGFAFTSPQFVLRACSFCSKAFPGGSIGSENERVAHSNSIANGSCRPQLTPLFPDDKPCSVAYDVELVDDDTWAVSCGLARAWEAREKGWSGFENR
        MFLRRGFAF SP F LR CSFCSKA P G +GSENERV+ S+ IANGS R QL+PLFPDDKP S AYDVELVDDDTWAVSCGLA AWE REK WSG EN+
Subjt:  MFLRRGFAFTSPQFVLRACSFCSKAFPGGSIGSENERVAHSNSIANGSCRPQLTPLFPDDKPCSVAYDVELVDDDTWAVSCGLARAWEAREKGWSGFENR

Query:  YSLEDEAHDPVDYCDSDFDDIDNMRIRGNLFYKLDQASKEFEECSLDFHRKKKSLKEKEDMVKRRSKVNDKLDKCLASGQVKLPEHLKNKYVIVERENDD
        Y LE+E HDPVDYCDSD DDIDNMRIRGNLFYKLD+ SKEFEE S DFHRKKKS+  KED  + RS++NDK D CLASG VKLPEH+KNKYVIVER+NDD
Subjt:  YSLEDEAHDPVDYCDSDFDDIDNMRIRGNLFYKLDQASKEFEECSLDFHRKKKSLKEKEDMVKRRSKVNDKLDKCLASGQVKLPEHLKNKYVIVERENDD

Query:  VEKKLRTPTFNQLTSPYHEPFCLDIFISKASVRACIIHRVTSKVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRALGDDIHNLIYTPRKGERIEGK
        VEKKLRTPTFNQLT PYHEPFCLDI+ISKASVRACIIHRVTSKVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRAL DDIHNL+YTPRK ERIEGK
Subjt:  VEKKLRTPTFNQLTSPYHEPFCLDIFISKASVRACIIHRVTSKVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRALGDDIHNLIYTPRKGERIEGK

Query:  LQIVLQSVIDNGINVKVKIKQQKRPRKLGRPPLA
        LQIVLQSVIDNG+NVKVKIKQQKRPRK+G PPLA
Subjt:  LQIVLQSVIDNGINVKVKIKQQKRPRKLGRPPLA

XP_022973751.1 uncharacterized protein LOC111472322 [Cucurbita maxima]5.5e-15483.53Show/hide
Query:  MFLRRGFAFTSPQFVLRACSFCSKAFPGGSIGSENERVAHSNSIANGSCRPQLTPLFPDDKPCSVAYDVELVDDDTWAVSCGLARAWEAREKGWSGFENR
        MFLRRGF+  SP FVLRACSF SKA   G +GSENERVAHS+SI NGS   Q +PLFP+ KP SVAYDVEL+DDDTWAVS  LARAWE REKG SGF+NR
Subjt:  MFLRRGFAFTSPQFVLRACSFCSKAFPGGSIGSENERVAHSNSIANGSCRPQLTPLFPDDKPCSVAYDVELVDDDTWAVSCGLARAWEAREKGWSGFENR

Query:  YSLEDEAHDPVDYCDSDFDDIDNMRIRGNLFYKLDQASKEFEECSLDFHRKKKSLKEKEDMVKRRSKVNDKLDKCLASGQVKLPEHLKNKYVIVERENDD
        Y LEDE HDP+DYCDS+FDDIDNMRIRGNLFYKLD+ SKEFEE S DFHRKKKS+KEKED  + +SKVNDK +  LASG VKLPEH+KNKYVI+EREN+D
Subjt:  YSLEDEAHDPVDYCDSDFDDIDNMRIRGNLFYKLDQASKEFEECSLDFHRKKKSLKEKEDMVKRRSKVNDKLDKCLASGQVKLPEHLKNKYVIVERENDD

Query:  VEKKLRTPTFNQLTSPYHEPFCLDIFISKASVRACIIHRVTSKVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRALGDDIHNLIYTPRKGERIEGK
         EKKLRTPTFNQLT+PYHEPFCLDI+ISKASVRACIIHRVTSKVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRAL DDIHNL+YTPRKGERIEGK
Subjt:  VEKKLRTPTFNQLTSPYHEPFCLDIFISKASVRACIIHRVTSKVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRALGDDIHNLIYTPRKGERIEGK

Query:  LQIVLQSVIDNGINVKVKIKQQKRPRKLGRPPLA
        LQIVLQSVIDNGINVKVKIKQQKRPRK+G+PPLA
Subjt:  LQIVLQSVIDNGINVKVKIKQQKRPRKLGRPPLA

XP_038896573.1 uncharacterized protein LOC120084825 [Benincasa hispida]5.7e-15987.16Show/hide
Query:  MFLRRGFAFTSPQFVLRACSFCSKAFPGGSIGSENERVAHSNSIANGSCRPQLTPLFPDDKPCSVAYDVELVDDDTWAVSCGLARAWEAREKGWSGFENR
        MFLRRGF+FTSPQFVLRACSFCSKA P GS+GSENERVAHS+SIAN S RPQ +PLF D KP SVAYDVELVD DTWAVSCGLARAWE RE+GW+GFENR
Subjt:  MFLRRGFAFTSPQFVLRACSFCSKAFPGGSIGSENERVAHSNSIANGSCRPQLTPLFPDDKPCSVAYDVELVDDDTWAVSCGLARAWEAREKGWSGFENR

Query:  YSLEDEAHDPVDYCDSDFDDIDNMRIRGNLFYKLDQASKEFEECSLDFHRKKKSLKEKEDMVKRRSKVNDKLDKCLASGQVKLPEHLKNKYVIVERENDD
          LEDEAHDP+DYCD DFD+IDNMRIRGNLFYKLD+ SKEFEE SLDFHRKKKS+KEKEDM K +SK+NDKLD  LA+G VKLPEH+KNKYVIVERE+DD
Subjt:  YSLEDEAHDPVDYCDSDFDDIDNMRIRGNLFYKLDQASKEFEECSLDFHRKKKSLKEKEDMVKRRSKVNDKLDKCLASGQVKLPEHLKNKYVIVERENDD

Query:  VEKKLRTPTFNQLTSPYHEPFCLDIFISKASVRACIIHRVTSKVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRALGDDIHNLIYTPRKGERIEGK
        VEKKLRTPTFNQLT PYHEPFCLDI+ISKASVRAC+IHRVTSKVVAVAHSIS DMKFDLTSRKDSSAC AVGAVLAQRAL DDIHNL+YTPRKGERIEGK
Subjt:  VEKKLRTPTFNQLTSPYHEPFCLDIFISKASVRACIIHRVTSKVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRALGDDIHNLIYTPRKGERIEGK

Query:  LQIVLQSVIDNGINVKVKIKQQKRPRK
        LQIVLQSVIDNGINVKVKIKQQKRPRK
Subjt:  LQIVLQSVIDNGINVKVKIKQQKRPRK

TrEMBL top hitse value%identityAlignment
A0A0A0KSG6 Uncharacterized protein1.7e-18899.7Show/hide
Query:  MFLRRGFAFTSPQFVLRACSFCSKAFPGGSIGSENERVAHSNSIANGSCRPQLTPLFPDDKPCSVAYDVELVDDDTWAVSCGLARAWEAREKGWSGFENR
        MFLRRGFAFTSPQFVLRACSFCSKAFPGGSIGSENERVAHSNSIANGSCRPQLTPLFPDDKPCSVAYDVELVDDDTWAVSCGLARAWEAREKGWSGFENR
Subjt:  MFLRRGFAFTSPQFVLRACSFCSKAFPGGSIGSENERVAHSNSIANGSCRPQLTPLFPDDKPCSVAYDVELVDDDTWAVSCGLARAWEAREKGWSGFENR

Query:  YSLEDEAHDPVDYCDSDFDDIDNMRIRGNLFYKLDQASKEFEECSLDFHRKKKSLKEKEDMVKRRSKVNDKLDKCLASGQVKLPEHLKNKYVIVERENDD
        YSLEDEAHDPVDYCDSDFDDIDNMRIRGNLFYKLDQASKEFEECSLDFHRKKKSLKEKEDMVKRRSKVNDKLDKCLASGQVKLPEHLKNKYVIVERENDD
Subjt:  YSLEDEAHDPVDYCDSDFDDIDNMRIRGNLFYKLDQASKEFEECSLDFHRKKKSLKEKEDMVKRRSKVNDKLDKCLASGQVKLPEHLKNKYVIVERENDD

Query:  VEKKLRTPTFNQLTSPYHEPFCLDIFISKASVRACIIHRVTSKVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRALGDDIHNLIYTPRKGERIEGK
        VEKKLRTPTFNQLTSPYHEPFCLDIFISKASVRACIIHRVTSKVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRALGDDIHNLIYTPRKGERIEGK
Subjt:  VEKKLRTPTFNQLTSPYHEPFCLDIFISKASVRACIIHRVTSKVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRALGDDIHNLIYTPRKGERIEGK

Query:  LQIVLQSVIDNGINVKVKIKQQKRPRKLGRPPLA
        LQIVLQSVIDNGINV VKIKQQKRPRKLGRPPLA
Subjt:  LQIVLQSVIDNGINVKVKIKQQKRPRKLGRPPLA

A0A1S3CAH6 uncharacterized protein LOC1034985141.4e-17193.6Show/hide
Query:  MFLRRGFAFTSPQFVLRACSFCSKAFPGGSIGSENERVAHSNSIANGSCRPQLTPLFPDDKPCSVAYDVELVDDDTWAVSCGLARAWEAREKGWSGFENR
        MFLRRGFAFTSPQ VLRACSFCSKAFPGGSIGSENERVAHSNSIANGS RPQLTPLFPDDKP SVAYD+ELVDDDTWAVSCGLARAWE REKGWSG ENR
Subjt:  MFLRRGFAFTSPQFVLRACSFCSKAFPGGSIGSENERVAHSNSIANGSCRPQLTPLFPDDKPCSVAYDVELVDDDTWAVSCGLARAWEAREKGWSGFENR

Query:  YSLEDEAHDPVDYCDSDFDDIDNMRIRGNLFYKLDQASKEFEECSLDFHRKKKSLKEKEDMVKRRSKVNDKLDKCLASGQVKLPEHLKNKYVIVERENDD
        YSLEDEAHDPVDYCDSDFDDIDNMRIRGNLFYKLD+ SKEF+E SLDFHRKKKS+KEKE+  K RSKVNDKLDKCL SGQVKLPEHLKNKYVIVERENDD
Subjt:  YSLEDEAHDPVDYCDSDFDDIDNMRIRGNLFYKLDQASKEFEECSLDFHRKKKSLKEKEDMVKRRSKVNDKLDKCLASGQVKLPEHLKNKYVIVERENDD

Query:  VEKKLRTPTFNQLTSPYHEPFCLDIFISKASVRACIIHRVTSKVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRALGDDIHNLIYTPRKGERIEGK
        VEKKLRTPTFNQLT  YHEPFCLDI+ISKASVRACIIHRVTSKVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRAL DDIHNLIYTPRKGERIEGK
Subjt:  VEKKLRTPTFNQLTSPYHEPFCLDIFISKASVRACIIHRVTSKVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRALGDDIHNLIYTPRKGERIEGK

Query:  LQIVLQSVIDNGINVKVKIKQQKRPRKL
        LQ+VLQSVIDNGINVKVKIKQQKRPRKL
Subjt:  LQIVLQSVIDNGINVKVKIKQQKRPRKL

A0A6J1C8X9 uncharacterized protein LOC1110092862.2e-15684.43Show/hide
Query:  MFLRRGFAFTSPQFVLRACSFCSKAFPGGSIGSENERVAHSNSIANGSCRPQLTPLFPDDKPCSVAYDVELVDDDTWAVSCGLARAWEAREKGWSGFENR
        MFLRRGFAF SP F LR CSFCSKA P G +GSENERV+ S+ IANGS R QL+PLFPDDKP S AYDVELVDDDTWAVSCGLA AWE REK WSG EN+
Subjt:  MFLRRGFAFTSPQFVLRACSFCSKAFPGGSIGSENERVAHSNSIANGSCRPQLTPLFPDDKPCSVAYDVELVDDDTWAVSCGLARAWEAREKGWSGFENR

Query:  YSLEDEAHDPVDYCDSDFDDIDNMRIRGNLFYKLDQASKEFEECSLDFHRKKKSLKEKEDMVKRRSKVNDKLDKCLASGQVKLPEHLKNKYVIVERENDD
        Y LE+E HDPVDYCDSD DDIDNMRIRGNLFYKLD+ SKEFEE S DFHRKKKS+  KED  + RS++NDK D CLASG VKLPEH+KNKYVIVER+NDD
Subjt:  YSLEDEAHDPVDYCDSDFDDIDNMRIRGNLFYKLDQASKEFEECSLDFHRKKKSLKEKEDMVKRRSKVNDKLDKCLASGQVKLPEHLKNKYVIVERENDD

Query:  VEKKLRTPTFNQLTSPYHEPFCLDIFISKASVRACIIHRVTSKVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRALGDDIHNLIYTPRKGERIEGK
        VEKKLRTPTFNQLT PYHEPFCLDI+ISKASVRACIIHRVTSKVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRAL DDIHNL+YTPRK ERIEGK
Subjt:  VEKKLRTPTFNQLTSPYHEPFCLDIFISKASVRACIIHRVTSKVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRALGDDIHNLIYTPRKGERIEGK

Query:  LQIVLQSVIDNGINVKVKIKQQKRPRKLGRPPLA
        LQIVLQSVIDNG+NVKVKIKQQKRPRK+G PPLA
Subjt:  LQIVLQSVIDNGINVKVKIKQQKRPRKLGRPPLA

A0A6J1F7N1 uncharacterized protein LOC111441610 isoform X17.3e-15282.69Show/hide
Query:  MFLRRGFAFTSPQFVLRACSFCSKAFPGGSIGSENERVAHSNSIANGSCRPQLTPLFPDDKPCSVAYDVELVDDDTWAVSCGLARAWEAREKGWSGFENR
        MFLRRGF+  SP FVLRAC F SKA   G + SENERVAHS+SI NGS  PQ +PLFP+ KP SVAYDVEL+DDD WAVS GLARAWE REKG SGF+NR
Subjt:  MFLRRGFAFTSPQFVLRACSFCSKAFPGGSIGSENERVAHSNSIANGSCRPQLTPLFPDDKPCSVAYDVELVDDDTWAVSCGLARAWEAREKGWSGFENR

Query:  YSLEDEAHDPVDYCDSDFDDIDNMRIRGNLFYKLDQASKEFEECSLDFHRKKKSLKEKEDMVKRRSKVNDKLDKCLASGQVKLPEHLKNKYVIVER-END
        Y LEDE HDP+DYCDS+FDDIDNMRIRGNLFYKLD+ SKEFEE S DFHRKKKS+KEKED  + +SKVNDK +  LASG VKLPEH+KNKYVI+ER EN+
Subjt:  YSLEDEAHDPVDYCDSDFDDIDNMRIRGNLFYKLDQASKEFEECSLDFHRKKKSLKEKEDMVKRRSKVNDKLDKCLASGQVKLPEHLKNKYVIVER-END

Query:  DVEKKLRTPTFNQLTSPYHEPFCLDIFISKASVRACIIHRVTSKVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRALGDDIHNLIYTPRKGERIEG
        D EKKLRTPTFNQLT+PYHEPFCLDI+ISKASVRACIIHR TSKVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRAL DDIHNL+YTPRKGERIEG
Subjt:  DVEKKLRTPTFNQLTSPYHEPFCLDIFISKASVRACIIHRVTSKVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRALGDDIHNLIYTPRKGERIEG

Query:  KLQIVLQSVIDNGINVKVKIKQQKRPRKLGRPPLA
        KLQIVLQSVIDNGINVKVKIKQQKRPRK+G+PPLA
Subjt:  KLQIVLQSVIDNGINVKVKIKQQKRPRKLGRPPLA

A0A6J1I8E0 uncharacterized protein LOC1114723222.7e-15483.53Show/hide
Query:  MFLRRGFAFTSPQFVLRACSFCSKAFPGGSIGSENERVAHSNSIANGSCRPQLTPLFPDDKPCSVAYDVELVDDDTWAVSCGLARAWEAREKGWSGFENR
        MFLRRGF+  SP FVLRACSF SKA   G +GSENERVAHS+SI NGS   Q +PLFP+ KP SVAYDVEL+DDDTWAVS  LARAWE REKG SGF+NR
Subjt:  MFLRRGFAFTSPQFVLRACSFCSKAFPGGSIGSENERVAHSNSIANGSCRPQLTPLFPDDKPCSVAYDVELVDDDTWAVSCGLARAWEAREKGWSGFENR

Query:  YSLEDEAHDPVDYCDSDFDDIDNMRIRGNLFYKLDQASKEFEECSLDFHRKKKSLKEKEDMVKRRSKVNDKLDKCLASGQVKLPEHLKNKYVIVERENDD
        Y LEDE HDP+DYCDS+FDDIDNMRIRGNLFYKLD+ SKEFEE S DFHRKKKS+KEKED  + +SKVNDK +  LASG VKLPEH+KNKYVI+EREN+D
Subjt:  YSLEDEAHDPVDYCDSDFDDIDNMRIRGNLFYKLDQASKEFEECSLDFHRKKKSLKEKEDMVKRRSKVNDKLDKCLASGQVKLPEHLKNKYVIVERENDD

Query:  VEKKLRTPTFNQLTSPYHEPFCLDIFISKASVRACIIHRVTSKVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRALGDDIHNLIYTPRKGERIEGK
         EKKLRTPTFNQLT+PYHEPFCLDI+ISKASVRACIIHRVTSKVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRAL DDIHNL+YTPRKGERIEGK
Subjt:  VEKKLRTPTFNQLTSPYHEPFCLDIFISKASVRACIIHRVTSKVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRALGDDIHNLIYTPRKGERIEGK

Query:  LQIVLQSVIDNGINVKVKIKQQKRPRKLGRPPLA
        LQIVLQSVIDNGINVKVKIKQQKRPRK+G+PPLA
Subjt:  LQIVLQSVIDNGINVKVKIKQQKRPRKLGRPPLA

SwissProt top hitse value%identityAlignment
Q3A6N1 50S ribosomal protein L188.4e-0430.43Show/hide
Query:  LDIFISKASVRACIIHRVTSKVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRALGDDIHNLIYTPRKGERIEGKLQIVLQSVIDNGIN
        L +F S   + A II  VT K +  A +++ D+   L +  +  A  AVG  +AQ+ALG DI N+++  R G    G+++ + ++  + G++
Subjt:  LDIFISKASVRACIIHRVTSKVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRALGDDIHNLIYTPRKGERIEGKLQIVLQSVIDNGIN

Arabidopsis top hitse value%identityAlignment
AT1G08845.1 Ribosomal L18p/L5e family protein2.6e-2449.17Show/hide
Query:  EKKLRTP----TFNQLTSPYHEPFCLDIFISKASVRACIIHRVTSKVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRALGDDIHNLIYTPRKGERI
        EKK + P    +F Q T  Y EPF LD+FISK  V A + HRVT + VAVA + SKD+K  L SR D  AC ++G +L++RA   D++   YTPR  ++ 
Subjt:  EKKLRTP----TFNQLTSPYHEPFCLDIFISKASVRACIIHRVTSKVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRALGDDIHNLIYTPRKGERI

Query:  EGKLQIVLQSVIDNGINVKV
        EGK++ V+QS+IDNGI+VK+
Subjt:  EGKLQIVLQSVIDNGINVKV

AT1G08845.2 Ribosomal L18p/L5e family protein2.6e-2449.17Show/hide
Query:  EKKLRTP----TFNQLTSPYHEPFCLDIFISKASVRACIIHRVTSKVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRALGDDIHNLIYTPRKGERI
        EKK + P    +F Q T  Y EPF LD+FISK  V A + HRVT + VAVA + SKD+K  L SR D  AC ++G +L++RA   D++   YTPR  ++ 
Subjt:  EKKLRTP----TFNQLTSPYHEPFCLDIFISKASVRACIIHRVTSKVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRALGDDIHNLIYTPRKGERI

Query:  EGKLQIVLQSVIDNGINVKV
        EGK++ V+QS+IDNGI+VK+
Subjt:  EGKLQIVLQSVIDNGINVKV

AT3G20230.1 Ribosomal L18p/L5e family protein8.6e-2037.29Show/hide
Query:  RENDDVEKKLRTPTFNQLTSPYHEPFCLDIFISKASVRACIIHRVTSKVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRALGDDIHNLIYTPRKGE
        R   +  K+    ++ Q T  Y  PF L++F S+  + A ++HR TSKV++VA + ++D++ ++ S  D+ AC  +G ++A+R++  D++ + Y PRKGE
Subjt:  RENDDVEKKLRTPTFNQLTSPYHEPFCLDIFISKASVRACIIHRVTSKVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRALGDDIHNLIYTPRKGE

Query:  RIEGKLQIVLQSVIDNGI
        RIEGKL IV+ ++ ++GI
Subjt:  RIEGKLQIVLQSVIDNGI

AT3G22450.1 Ribosomal L18p/L5e family protein5.9e-6954.23Show/hide
Query:  VELVDDDTWAVSCGLARAWEAREKGWSGFENRYSLEDEAHDPVDYCDSDFDDIDNMRIRGNLFYKLDQASKEFEECSLDFHRKKKSLK-EKEDMVKRRSK
        +E VDDD W VS  L++AW   +   +   +  +++      +D  D D D+IDNMRIRG+LF+KLD+ SKEFEE + DFHRK +    +KE   +  +K
Subjt:  VELVDDDTWAVSCGLARAWEAREKGWSGFENRYSLEDEAHDPVDYCDSDFDDIDNMRIRGNLFYKLDQASKEFEECSLDFHRKKKSLK-EKEDMVKRRSK

Query:  VNDKLDKCLASGQVKLPEHLKNKYVIVERENDDVEKKLRTPTFNQLTSPYHEPFCLDIFISKASVRACIIHRVTSKVVAVAHSISKDMKFDLTSRKDSSA
        +     K +     K  +    +    +  N+ V+K+ RT TFNQLT+P+H PFCLDI+ISK SVRAC+IHRVTSKVV VAHSISKDMKFDL SR++ +A
Subjt:  VNDKLDKCLASGQVKLPEHLKNKYVIVERENDDVEKKLRTPTFNQLTSPYHEPFCLDIFISKASVRACIIHRVTSKVVAVAHSISKDMKFDLTSRKDSSA

Query:  CAAVGAVLAQRALGDDIHNLIYTPRKGERIEGKLQIVLQSVIDNGINVKVKIKQQKRPRK
        CAAVGAVLAQR+L DDIH++IYTPRKG++IEGKLQ+VLQ++IDNG+NVKVK+KQ+K  +K
Subjt:  CAAVGAVLAQRALGDDIHNLIYTPRKGERIEGKLQIVLQSVIDNGINVKVKIKQQKRPRK

AT5G27820.1 Ribosomal L18p/L5e family protein2.4e-0628.28Show/hide
Query:  YHEPFCLDIFISKASVRACIIHRVTSKVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRALGDDIHNLIYTPRKGERIEGKLQIVLQSVIDNGINV
        Y +P+ L +  +   V A +IH  T+ V   A S  K ++  +   +D +A + +G +L +R L  DI  +    +K +R  GK++ V+ SV + G+ +
Subjt:  YHEPFCLDIFISKASVRACIIHRVTSKVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRALGDDIHNLIYTPRKGERIEGKLQIVLQSVIDNGINV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTTGAGGAGAGGGTTTGCTTTTACTAGCCCTCAATTTGTTTTGAGGGCCTGCAGCTTTTGCTCAAAAGCATTTCCTGGGGGAAGCATTGGAAGCGAGAATGAAAG
AGTAGCTCATTCAAATAGTATTGCAAATGGTTCATGCAGGCCTCAGCTAACTCCATTGTTCCCTGATGATAAACCTTGTTCAGTTGCTTATGATGTTGAACTTGTAGATG
ATGATACTTGGGCAGTTTCATGTGGTTTAGCAAGAGCATGGGAAGCGAGAGAAAAGGGCTGGTCTGGCTTTGAAAATAGATACTCCTTAGAGGATGAGGCTCATGACCCA
GTTGATTATTGTGATTCAGATTTTGATGATATTGACAACATGAGAATACGTGGAAATCTCTTCTACAAACTTGACCAAGCATCCAAAGAGTTTGAAGAATGTAGCCTTGA
TTTTCATCGGAAGAAAAAGTCTCTAAAGGAAAAGGAAGATATGGTGAAAAGAAGAAGCAAAGTAAATGATAAACTCGATAAGTGTTTGGCAAGTGGCCAAGTAAAGCTTC
CTGAACATCTGAAGAACAAATATGTAATAGTTGAAAGGGAGAATGATGATGTTGAGAAGAAGCTTAGGACACCCACATTTAATCAACTTACCAGTCCTTACCATGAGCCA
TTTTGTCTTGATATATTCATATCAAAGGCCTCAGTTCGAGCCTGCATTATTCACCGAGTAACTAGTAAGGTTGTTGCTGTGGCACATTCAATTTCTAAAGACATGAAATT
TGACCTGACTTCAAGGAAGGATTCCTCTGCCTGTGCTGCTGTAGGGGCTGTTTTGGCCCAGAGAGCATTGGGCGATGATATCCACAATCTGATATACACGCCAAGAAAAG
GTGAGAGGATAGAAGGGAAGCTTCAAATTGTGCTTCAGTCTGTTATTGATAATGGGATTAATGTTAAGGTAAAAATTAAGCAGCAAAAGAGACCCAGAAAGTTGGGAAGG
CCACCTTTAGCATAG
mRNA sequenceShow/hide mRNA sequence
ATGTTCTTGAGGAGAGGGTTTGCTTTTACTAGCCCTCAATTTGTTTTGAGGGCCTGCAGCTTTTGCTCAAAAGCATTTCCTGGGGGAAGCATTGGAAGCGAGAATGAAAG
AGTAGCTCATTCAAATAGTATTGCAAATGGTTCATGCAGGCCTCAGCTAACTCCATTGTTCCCTGATGATAAACCTTGTTCAGTTGCTTATGATGTTGAACTTGTAGATG
ATGATACTTGGGCAGTTTCATGTGGTTTAGCAAGAGCATGGGAAGCGAGAGAAAAGGGCTGGTCTGGCTTTGAAAATAGATACTCCTTAGAGGATGAGGCTCATGACCCA
GTTGATTATTGTGATTCAGATTTTGATGATATTGACAACATGAGAATACGTGGAAATCTCTTCTACAAACTTGACCAAGCATCCAAAGAGTTTGAAGAATGTAGCCTTGA
TTTTCATCGGAAGAAAAAGTCTCTAAAGGAAAAGGAAGATATGGTGAAAAGAAGAAGCAAAGTAAATGATAAACTCGATAAGTGTTTGGCAAGTGGCCAAGTAAAGCTTC
CTGAACATCTGAAGAACAAATATGTAATAGTTGAAAGGGAGAATGATGATGTTGAGAAGAAGCTTAGGACACCCACATTTAATCAACTTACCAGTCCTTACCATGAGCCA
TTTTGTCTTGATATATTCATATCAAAGGCCTCAGTTCGAGCCTGCATTATTCACCGAGTAACTAGTAAGGTTGTTGCTGTGGCACATTCAATTTCTAAAGACATGAAATT
TGACCTGACTTCAAGGAAGGATTCCTCTGCCTGTGCTGCTGTAGGGGCTGTTTTGGCCCAGAGAGCATTGGGCGATGATATCCACAATCTGATATACACGCCAAGAAAAG
GTGAGAGGATAGAAGGGAAGCTTCAAATTGTGCTTCAGTCTGTTATTGATAATGGGATTAATGTTAAGGTAAAAATTAAGCAGCAAAAGAGACCCAGAAAGTTGGGAAGG
CCACCTTTAGCATAG
Protein sequenceShow/hide protein sequence
MFLRRGFAFTSPQFVLRACSFCSKAFPGGSIGSENERVAHSNSIANGSCRPQLTPLFPDDKPCSVAYDVELVDDDTWAVSCGLARAWEAREKGWSGFENRYSLEDEAHDP
VDYCDSDFDDIDNMRIRGNLFYKLDQASKEFEECSLDFHRKKKSLKEKEDMVKRRSKVNDKLDKCLASGQVKLPEHLKNKYVIVERENDDVEKKLRTPTFNQLTSPYHEP
FCLDIFISKASVRACIIHRVTSKVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRALGDDIHNLIYTPRKGERIEGKLQIVLQSVIDNGINVKVKIKQQKRPRKLGR
PPLA