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CSPI05G29440 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G29440
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr5:27679948..27680607
RNA-Seq ExpressionCSPI05G29440
SyntenyCSPI05G29440
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039429.1 hypothetical protein E6C27_scaffold64G002360 [Cucumis melo var. makuwa]3.5e-2560.55Show/hide
Query:  MGSRSSFSGLTM-VVVVMLITILFSSHSCRGSVLIKANATYDVVMTEELMIYGDINRHLMPSGSKAKTGKTHERNVVACGNGAGNTYAVCGGSISNENKC
        MG RSSF GLTM VVVVM ITIL SS+SCRGSVL+KANATY  V T E++IY DI R LMP GSK  TG T E N+V C NG GN +  CGG+ +N+ +C
Subjt:  MGSRSSFSGLTM-VVVVMLITILFSSHSCRGSVLIKANATYDVVMTEELMIYGDINRHLMPSGSKAKTGKTHERNVVACGNGAGNTYAVCGGSISNENKC

Query:  DAYKGPNAC
        + Y     C
Subjt:  DAYKGPNAC

KAA0039430.1 hypothetical protein E6C27_scaffold64G002370 [Cucumis melo var. makuwa]1.5e-3979.63Show/hide
Query:  MGSRSSFSGLTMVVVVMLITILFSSHSCRGSVLIKANATYDVVMTEELMIYGDINRHLMPSGSKAKTGKTHERNVVACGNGAGNTYAVCGGSISNENKCD
        MGSRSSFSGLTMVVV+MLITI  SSHSCRGSVLIKANATYDVVMTEEL+IY DINR+LM +G  AKTGKT+++NVVACGNGAGN++A C GS SN+ KC+
Subjt:  MGSRSSFSGLTMVVVVMLITILFSSHSCRGSVLIKANATYDVVMTEELMIYGDINRHLMPSGSKAKTGKTHERNVVACGNGAGNTYAVCGGSISNENKCD

Query:  AYKGPNAC
        AYKGP AC
Subjt:  AYKGPNAC

KAG6578548.1 hypothetical protein SDJN03_22996, partial [Cucurbita argyrosperma subsp. sororia]1.2e-0943.52Show/hide
Query:  MGSRSSFSGLTMVVVVMLITILFSSHSCRGSVLIKANATYDVVMTEELMIYGDINRHLMPSGSKAKTGKTHERNVVACGNGAGNTYAVCGGSISNENKCD
        MG R SF G+  V  +M+  IL SS+S R S L +ANATY  V   EL++  +I R L     K  T KT    V +CGNG GN    C GS +N+  C+
Subjt:  MGSRSSFSGLTMVVVVMLITILFSSHSCRGSVLIKANATYDVVMTEELMIYGDINRHLMPSGSKAKTGKTHERNVVACGNGAGNTYAVCGGSISNENKCD

Query:  AYKGPNAC
        +Y G +AC
Subjt:  AYKGPNAC

KGN52518.1 hypothetical protein Csa_007870 [Cucumis sativus]2.2e-2762.83Show/hide
Query:  MGSR----SSFSGLTMVVVV-MLITILFSSHSCRGSVLIKANATYDVVMTEELMIYGDINRHLMPSGSKAKTGKTHERNVVACGNGAGNTYAVCGGSISN
        MGSR    SSFSGLTMVVVV MLITIL+SSH+CR SVLIKANATY  VMT EL+IY D+ R+LM   + +KTGKT ++ VV C NG GN+++ CGGS SN
Subjt:  MGSR----SSFSGLTMVVVV-MLITILFSSHSCRGSVLIKANATYDVVMTEELMIYGDINRHLMPSGSKAKTGKTHERNVVACGNGAGNTYAVCGGSISN

Query:  ENKCDAYKGPNAC
        + +C+AY  P  C
Subjt:  ENKCDAYKGPNAC

KGN52519.1 hypothetical protein Csa_008872 [Cucumis sativus]1.3e-2763.3Show/hide
Query:  MGSRSSFSGLTM-VVVVMLITILFSSHSCRGSVLIKANATYDVVMTEELMIYGDINRHLMPSGSKAKTGKTHERNVVACGNGAGNTYAVCGGSISNENKC
        MG RSSF GLTM VVVVM ITIL SS+SCRGS+L+KANAT   VMT EL+I  DI R+L+  G+ A TG T + N+V CGNGAGNT++ CGG+ +N  +C
Subjt:  MGSRSSFSGLTM-VVVVMLITILFSSHSCRGSVLIKANATYDVVMTEELMIYGDINRHLMPSGSKAKTGKTHERNVVACGNGAGNTYAVCGGSISNENKC

Query:  DAYKGPNAC
        +AY+GPNAC
Subjt:  DAYKGPNAC

TrEMBL top hitse value%identityAlignment
A0A0A0KSJ4 Uncharacterized protein1.1e-2762.83Show/hide
Query:  MGSR----SSFSGLTMVVVV-MLITILFSSHSCRGSVLIKANATYDVVMTEELMIYGDINRHLMPSGSKAKTGKTHERNVVACGNGAGNTYAVCGGSISN
        MGSR    SSFSGLTMVVVV MLITIL+SSH+CR SVLIKANATY  VMT EL+IY D+ R+LM   + +KTGKT ++ VV C NG GN+++ CGGS SN
Subjt:  MGSR----SSFSGLTMVVVV-MLITILFSSHSCRGSVLIKANATYDVVMTEELMIYGDINRHLMPSGSKAKTGKTHERNVVACGNGAGNTYAVCGGSISN

Query:  ENKCDAYKGPNAC
        + +C+AY  P  C
Subjt:  ENKCDAYKGPNAC

A0A0A0KUG7 Uncharacterized protein6.3e-2863.3Show/hide
Query:  MGSRSSFSGLTM-VVVVMLITILFSSHSCRGSVLIKANATYDVVMTEELMIYGDINRHLMPSGSKAKTGKTHERNVVACGNGAGNTYAVCGGSISNENKC
        MG RSSF GLTM VVVVM ITIL SS+SCRGS+L+KANAT   VMT EL+I  DI R+L+  G+ A TG T + N+V CGNGAGNT++ CGG+ +N  +C
Subjt:  MGSRSSFSGLTM-VVVVMLITILFSSHSCRGSVLIKANATYDVVMTEELMIYGDINRHLMPSGSKAKTGKTHERNVVACGNGAGNTYAVCGGSISNENKC

Query:  DAYKGPNAC
        +AY+GPNAC
Subjt:  DAYKGPNAC

A0A0A0KVT8 Uncharacterized protein1.5e-53100Show/hide
Query:  MGSRSSFSGLTMVVVVMLITILFSSHSCRGSVLIKANATYDVVMTEELMIYGDINRHLMPSGSKAKTGKTHERNVVACGNGAGNTYAVCGGSISNENKCD
        MGSRSSFSGLTMVVVVMLITILFSSHSCRGSVLIKANATYDVVMTEELMIYGDINRHLMPSGSKAKTGKTHERNVVACGNGAGNTYAVCGGSISNENKCD
Subjt:  MGSRSSFSGLTMVVVVMLITILFSSHSCRGSVLIKANATYDVVMTEELMIYGDINRHLMPSGSKAKTGKTHERNVVACGNGAGNTYAVCGGSISNENKCD

Query:  AYKGPNAC
        AYKGPNAC
Subjt:  AYKGPNAC

A0A5D3BNE4 Uncharacterized protein1.7e-2560.55Show/hide
Query:  MGSRSSFSGLTM-VVVVMLITILFSSHSCRGSVLIKANATYDVVMTEELMIYGDINRHLMPSGSKAKTGKTHERNVVACGNGAGNTYAVCGGSISNENKC
        MG RSSF GLTM VVVVM ITIL SS+SCRGSVL+KANATY  V T E++IY DI R LMP GSK  TG T E N+V C NG GN +  CGG+ +N+ +C
Subjt:  MGSRSSFSGLTM-VVVVMLITILFSSHSCRGSVLIKANATYDVVMTEELMIYGDINRHLMPSGSKAKTGKTHERNVVACGNGAGNTYAVCGGSISNENKC

Query:  DAYKGPNAC
        + Y     C
Subjt:  DAYKGPNAC

A0A5D3BR80 Uncharacterized protein7.1e-4079.63Show/hide
Query:  MGSRSSFSGLTMVVVVMLITILFSSHSCRGSVLIKANATYDVVMTEELMIYGDINRHLMPSGSKAKTGKTHERNVVACGNGAGNTYAVCGGSISNENKCD
        MGSRSSFSGLTMVVV+MLITI  SSHSCRGSVLIKANATYDVVMTEEL+IY DINR+LM +G  AKTGKT+++NVVACGNGAGN++A C GS SN+ KC+
Subjt:  MGSRSSFSGLTMVVVVMLITILFSSHSCRGSVLIKANATYDVVMTEELMIYGDINRHLMPSGSKAKTGKTHERNVVACGNGAGNTYAVCGGSISNENKCD

Query:  AYKGPNAC
        AYKGP AC
Subjt:  AYKGPNAC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTAGTCGTTCTTCATTTAGTGGATTAACAATGGTGGTGGTGGTGATGTTGATAACCATCCTCTTTTCCAGCCACAGCTGCAGAGGTTCGGTTCTGATCAAGGCGAA
TGCCACGTACGACGTCGTGATGACAGAAGAGTTGATGATCTACGGTGATATAAATCGACATCTCATGCCCAGTGGTAGCAAAGCAAAGACAGGTAAGACACATGAGCGAA
ACGTCGTAGCTTGCGGTAATGGCGCCGGAAATACCTATGCTGTCTGTGGTGGAAGCATCAGCAATGAAAATAAATGCGATGCATACAAAGGCCCCAATGCTTGCTAA
mRNA sequenceShow/hide mRNA sequence
AGTTCTCTCCTCCCCCAACAAAATATCCCATACCCCGACGAACAAGTCGAGAAACCGAGCACCAAACATGGGTAGTCGTTCTTCATTTAGTGGATTAACAATGGTGGTGG
TGGTGATGTTGATAACCATCCTCTTTTCCAGCCACAGCTGCAGAGGTTCGGTTCTGATCAAGGCGAATGCCACGTACGACGTCGTGATGACAGAAGAGTTGATGATCTAC
GGTGATATAAATCGACATCTCATGCCCAGTGGTAGCAAAGCAAAGACAGGTAAGACACATGAGCGAAACGTCGTAGCTTGCGGTAATGGCGCCGGAAATACCTATGCTGT
CTGTGGTGGAAGCATCAGCAATGAAAATAAATGCGATGCATACAAAGGCCCCAATGCTTGCTAATAATCCCTTCAATGATTCCATACCAATACTAATATTAATTGTTATG
GCATCCCCTCTTCTTTTTACTTTGAATTTTTATTTCTCTTTACCGTGGAGTTGTTTGTTGCTTCGATTAATTATGTCTTTTGGTGATGGTTGTTTGTTTGTGTGTGTGAA
ATAAGAACCTAATGAAACGGCTCATCTTCTTCTTCAAATTTGTAACGACGTAATATGAATATTTCTTAACTATAAGTGTTTATGTATACAAAGAACAAGAAATTTCATTA
Protein sequenceShow/hide protein sequence
MGSRSSFSGLTMVVVVMLITILFSSHSCRGSVLIKANATYDVVMTEELMIYGDINRHLMPSGSKAKTGKTHERNVVACGNGAGNTYAVCGGSISNENKCDAYKGPNAC