; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI05G29450 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G29450
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr5:27681689..27682331
RNA-Seq ExpressionCSPI05G29450
SyntenyCSPI05G29450
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039429.1 hypothetical protein E6C27_scaffold64G002360 [Cucumis melo var. makuwa]5.4e-2456.64Show/hide
Query:  MGSRSSSSSSFSGLTMVVVVMMLITILYSSHTCRASVLIKANATYGGVMTAELLIYPDVTRYLMYDHADSKTGKTKDKEVVVCDNGKGNSFSGCGGSSSN
        MG R    SSF GLTMVVVV+M ITIL SS++CR SVL+KANATYGGV T E++IY D+TR+LM   +   TG T +  +V C+NG GN F  CGG+++N
Subjt:  MGSRSSSSSSFSGLTMVVVVMMLITILYSSHTCRASVLIKANATYGGVMTAELLIYPDVTRYLMYDHADSKTGKTKDKEVVVCDNGKGNSFSGCGGSSSN

Query:  KKQCNAYGDPKDC
        ++QCN Y   K C
Subjt:  KKQCNAYGDPKDC

KAA0039430.1 hypothetical protein E6C27_scaffold64G002370 [Cucumis melo var. makuwa]3.7e-3372.57Show/hide
Query:  MGSRSSSSSSFSGLTMVVVVMMLITILYSSHTCRASVLIKANATYGGVMTAELLIYPDVTRYLMYDHADSKTGKTKDKEVVVCDNGKGNSFSGCGGSSSN
        MGSR    SSFSGLTM VVVMMLITI  SSH+CR SVLIKANATY  VMT ELLIYPD+ RYLM++  D+KTGKT DK VV C NG GNSF+GC GS+SN
Subjt:  MGSRSSSSSSFSGLTMVVVVMMLITILYSSHTCRASVLIKANATYGGVMTAELLIYPDVTRYLMYDHADSKTGKTKDKEVVVCDNGKGNSFSGCGGSSSN

Query:  KKQCNAYGDPKDC
        KK+CNAY  PK C
Subjt:  KKQCNAYGDPKDC

KAG6578548.1 hypothetical protein SDJN03_22996, partial [Cucurbita argyrosperma subsp. sororia]8.3e-0941.84Show/hide
Query:  MVVVVMMLITILYSSHTCRASVLIKANATYGGVMTAELLIYPDVTRYLMYDHADSKTGKTKDKEVVVCDNGKGNSFSGCGGSSSNKKQCNAYGDPKDC
        + V  +M+  IL SS++ RAS L +ANATYG V   ELL+  ++ R+L + +    T KT++  V  C NG GN    C GS +NKK CN+Y     C
Subjt:  MVVVVMMLITILYSSHTCRASVLIKANATYGGVMTAELLIYPDVTRYLMYDHADSKTGKTKDKEVVVCDNGKGNSFSGCGGSSSNKKQCNAYGDPKDC

KGN52518.1 hypothetical protein Csa_007870 [Cucumis sativus]3.5e-55100Show/hide
Query:  MGSRSSSSSSFSGLTMVVVVMMLITILYSSHTCRASVLIKANATYGGVMTAELLIYPDVTRYLMYDHADSKTGKTKDKEVVVCDNGKGNSFSGCGGSSSN
        MGSRSSSSSSFSGLTMVVVVMMLITILYSSHTCRASVLIKANATYGGVMTAELLIYPDVTRYLMYDHADSKTGKTKDKEVVVCDNGKGNSFSGCGGSSSN
Subjt:  MGSRSSSSSSFSGLTMVVVVMMLITILYSSHTCRASVLIKANATYGGVMTAELLIYPDVTRYLMYDHADSKTGKTKDKEVVVCDNGKGNSFSGCGGSSSN

Query:  KKQCNAYGDPKDCI
        KKQCNAYGDPKDCI
Subjt:  KKQCNAYGDPKDCI

KGN52519.1 hypothetical protein Csa_008872 [Cucumis sativus]2.6e-2658.77Show/hide
Query:  MGSRSSSSSSFSGLTMVVVVMMLITILYSSHTCRASVLIKANATYGGVMTAELLIYPDVTRYLMYDHADSKTGKTKDKEVVVCDNGKGNSFSGCGGSSSN
        MG R    SSF GLTMVVVV+M ITIL SS++CR S+L+KANAT G VMT EL+I  D+TRYL++  A + TG T D  +V C NG GN+FSGCGG+++N
Subjt:  MGSRSSSSSSFSGLTMVVVVMMLITILYSSHTCRASVLIKANATYGGVMTAELLIYPDVTRYLMYDHADSKTGKTKDKEVVVCDNGKGNSFSGCGGSSSN

Query:  KKQCNAYGDPKDCI
         +QCNAY  P  C+
Subjt:  KKQCNAYGDPKDCI

TrEMBL top hitse value%identityAlignment
A0A0A0KSJ4 Uncharacterized protein1.7e-55100Show/hide
Query:  MGSRSSSSSSFSGLTMVVVVMMLITILYSSHTCRASVLIKANATYGGVMTAELLIYPDVTRYLMYDHADSKTGKTKDKEVVVCDNGKGNSFSGCGGSSSN
        MGSRSSSSSSFSGLTMVVVVMMLITILYSSHTCRASVLIKANATYGGVMTAELLIYPDVTRYLMYDHADSKTGKTKDKEVVVCDNGKGNSFSGCGGSSSN
Subjt:  MGSRSSSSSSFSGLTMVVVVMMLITILYSSHTCRASVLIKANATYGGVMTAELLIYPDVTRYLMYDHADSKTGKTKDKEVVVCDNGKGNSFSGCGGSSSN

Query:  KKQCNAYGDPKDCI
        KKQCNAYGDPKDCI
Subjt:  KKQCNAYGDPKDCI

A0A0A0KUG7 Uncharacterized protein1.2e-2658.77Show/hide
Query:  MGSRSSSSSSFSGLTMVVVVMMLITILYSSHTCRASVLIKANATYGGVMTAELLIYPDVTRYLMYDHADSKTGKTKDKEVVVCDNGKGNSFSGCGGSSSN
        MG R    SSF GLTMVVVV+M ITIL SS++CR S+L+KANAT G VMT EL+I  D+TRYL++  A + TG T D  +V C NG GN+FSGCGG+++N
Subjt:  MGSRSSSSSSFSGLTMVVVVMMLITILYSSHTCRASVLIKANATYGGVMTAELLIYPDVTRYLMYDHADSKTGKTKDKEVVVCDNGKGNSFSGCGGSSSN

Query:  KKQCNAYGDPKDCI
         +QCNAY  P  C+
Subjt:  KKQCNAYGDPKDCI

A0A0A0KVT8 Uncharacterized protein1.6e-2662.83Show/hide
Query:  MGSRSSSSSSFSGLTMVVVVMMLITILYSSHTCRASVLIKANATYGGVMTAELLIYPDVTRYLMYDHADSKTGKTKDKEVVVCDNGKGNSFSGCGGSSSN
        MGSR    SSFSGLTMVVVV MLITIL+SSH+CR SVLIKANATY  VMT EL+IY D+ R+LM   + +KTGKT ++ VV C NG GN+++ CGGS SN
Subjt:  MGSRSSSSSSFSGLTMVVVVMMLITILYSSHTCRASVLIKANATYGGVMTAELLIYPDVTRYLMYDHADSKTGKTKDKEVVVCDNGKGNSFSGCGGSSSN

Query:  KKQCNAYGDPKDC
        + +C+AY  P  C
Subjt:  KKQCNAYGDPKDC

A0A5D3BNE4 Uncharacterized protein2.6e-2456.64Show/hide
Query:  MGSRSSSSSSFSGLTMVVVVMMLITILYSSHTCRASVLIKANATYGGVMTAELLIYPDVTRYLMYDHADSKTGKTKDKEVVVCDNGKGNSFSGCGGSSSN
        MG R    SSF GLTMVVVV+M ITIL SS++CR SVL+KANATYGGV T E++IY D+TR+LM   +   TG T +  +V C+NG GN F  CGG+++N
Subjt:  MGSRSSSSSSFSGLTMVVVVMMLITILYSSHTCRASVLIKANATYGGVMTAELLIYPDVTRYLMYDHADSKTGKTKDKEVVVCDNGKGNSFSGCGGSSSN

Query:  KKQCNAYGDPKDC
        ++QCN Y   K C
Subjt:  KKQCNAYGDPKDC

A0A5D3BR80 Uncharacterized protein1.8e-3372.57Show/hide
Query:  MGSRSSSSSSFSGLTMVVVVMMLITILYSSHTCRASVLIKANATYGGVMTAELLIYPDVTRYLMYDHADSKTGKTKDKEVVVCDNGKGNSFSGCGGSSSN
        MGSR    SSFSGLTM VVVMMLITI  SSH+CR SVLIKANATY  VMT ELLIYPD+ RYLM++  D+KTGKT DK VV C NG GNSF+GC GS+SN
Subjt:  MGSRSSSSSSFSGLTMVVVVMMLITILYSSHTCRASVLIKANATYGGVMTAELLIYPDVTRYLMYDHADSKTGKTKDKEVVVCDNGKGNSFSGCGGSSSN

Query:  KKQCNAYGDPKDC
        KK+CNAY  PK C
Subjt:  KKQCNAYGDPKDC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCAGTCGTTCTTCCTCTTCTTCTTCGTTCAGTGGATTAACAATGGTGGTGGTAGTGATGATGTTGATAACCATCCTCTATTCCAGCCACACCTGCAGAGCTTCGGT
TCTGATCAAGGCCAATGCCACGTACGGCGGTGTGATGACAGCGGAGTTGCTGATCTACCCTGATGTAACTCGGTATCTCATGTATGATCATGCAGACTCAAAGACCGGTA
AGACCAAAGACAAAGAAGTCGTAGTTTGTGACAACGGCAAGGGAAATAGCTTTTCCGGCTGTGGTGGTAGCTCCAGCAATAAAAAGCAATGCAATGCATACGGTGATCCC
AAAGATTGCATATAA
mRNA sequenceShow/hide mRNA sequence
GAGCGAGAGAGATGAACCCCTGCCTCCATCTTCAAGCTTCTTTATCAATTCTATAAGTTCTCTCCTCCCCCAACAAAATCCCGTATTCTGACGAACAAGTCGAGAAAGAG
AGCACCAAAAATGGGCAGTCGTTCTTCCTCTTCTTCTTCGTTCAGTGGATTAACAATGGTGGTGGTAGTGATGATGTTGATAACCATCCTCTATTCCAGCCACACCTGCA
GAGCTTCGGTTCTGATCAAGGCCAATGCCACGTACGGCGGTGTGATGACAGCGGAGTTGCTGATCTACCCTGATGTAACTCGGTATCTCATGTATGATCATGCAGACTCA
AAGACCGGTAAGACCAAAGACAAAGAAGTCGTAGTTTGTGACAACGGCAAGGGAAATAGCTTTTCCGGCTGTGGTGGTAGCTCCAGCAATAAAAAGCAATGCAATGCATA
CGGTGATCCCAAAGATTGCATATAATCATTTCTATATGACTGATCTGTGTTCTTTGCCATGGTATCTTCTGTTTTTTTTGTGTGTGTGTTTTCTTGATGTTGAGTCGTTG
TTTGTTTGCTTTAATATTTAATCTATGTAATTGGTGTTTGTGTGAAATAAAGAAAAATGAAATTTCTCATCTTCTTTCAAACACTATAATTTC
Protein sequenceShow/hide protein sequence
MGSRSSSSSSFSGLTMVVVVMMLITILYSSHTCRASVLIKANATYGGVMTAELLIYPDVTRYLMYDHADSKTGKTKDKEVVVCDNGKGNSFSGCGGSSSNKKQCNAYGDP
KDCI