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CSPI05G29460 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G29460
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr5:27683011..27683916
RNA-Seq ExpressionCSPI05G29460
SyntenyCSPI05G29460
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039429.1 hypothetical protein E6C27_scaffold64G002360 [Cucumis melo var. makuwa]4.2e-3473.39Show/hide
Query:  MGGRSSFCGLTMVVVVVMSITILSSSYSCRGSILMKANATLGSVMTTELIINHDITRYLIFKGATAVTGATADPNIVTCGNGAGNTFSGCGGNANNTQQC
        MGGRSSFCGLTMVVVVVMSITILSSSYSCRGS+LMKANAT G V TTE+II HDITR+L+  G+  VTG T +PNIV C NG GN F  CGGNANN QQC
Subjt:  MGGRSSFCGLTMVVVVVMSITILSSSYSCRGSILMKANATLGSVMTTELIINHDITRYLIFKGATAVTGATADPNIVTCGNGAGNTFSGCGGNANNTQQC

Query:  NAYQGPNAC
        N Y     C
Subjt:  NAYQGPNAC

KAA0039430.1 hypothetical protein E6C27_scaffold64G002370 [Cucumis melo var. makuwa]7.7e-2864.22Show/hide
Query:  MGGRSSFCGLTMVVVVVMSITILSSSYSCRGSILMKANATLGSVMTTELIINHDITRYLIFKGATAVTGATADPNIVTCGNGAGNTFSGCGGNANNTQQC
        MG RSSF GLTM VVV+M ITI  SS+SCRGS+L+KANAT   VMT EL+I  DI RYL+F G  A TG T D N+V CGNGAGN+F+GC G+ +N ++C
Subjt:  MGGRSSFCGLTMVVVVVMSITILSSSYSCRGSILMKANATLGSVMTTELIINHDITRYLIFKGATAVTGATADPNIVTCGNGAGNTFSGCGGNANNTQQC

Query:  NAYQGPNAC
        NAY+GP AC
Subjt:  NAYQGPNAC

KAG6578548.1 hypothetical protein SDJN03_22996, partial [Cucurbita argyrosperma subsp. sororia]1.7e-1144.04Show/hide
Query:  MGGRSSFCGLTMVVVVVMSITILSSSYSCRGSILMKANATLGSVMTTELIINHDITRYLIFKGATAVTGATADPNIVTCGNGAGNTFSGCGGNANNTQQC
        MGGR SF G  + V  +M   IL SS S R S L +ANAT G V   EL++  +I R+L FK     T  T +P + +CGNG GN    C G+  N + C
Subjt:  MGGRSSFCGLTMVVVVVMSITILSSSYSCRGSILMKANATLGSVMTTELIINHDITRYLIFKGATAVTGATADPNIVTCGNGAGNTFSGCGGNANNTQQC

Query:  NAYQGPNAC
        N+Y G +AC
Subjt:  NAYQGPNAC

KGN52518.1 hypothetical protein Csa_007870 [Cucumis sativus]9.5e-2658.77Show/hide
Query:  MGGR----SSFCGLTMVVVVVMSITILSSSYSCRGSILMKANATLGSVMTTELIINHDITRYLIFKGATAVTGATADPNIVTCGNGAGNTFSGCGGNANN
        MG R    SSF GLTMVVVV+M ITIL SS++CR S+L+KANAT G VMT EL+I  D+TRYL++  A + TG T D  +V C NG GN+FSGCGG+++N
Subjt:  MGGR----SSFCGLTMVVVVVMSITILSSSYSCRGSILMKANATLGSVMTTELIINHDITRYLIFKGATAVTGATADPNIVTCGNGAGNTFSGCGGNANN

Query:  TQQCNAYQGPNACL
         +QCNAY  P  C+
Subjt:  TQQCNAYQGPNACL

KGN52519.1 hypothetical protein Csa_008872 [Cucumis sativus]5.9e-5299.09Show/hide
Query:  MGGRSSFCGLTMVVVVVMSITILSSSYSCRGSILMKANATLGSVMTTELIINHDITRYLIFKGATAVTGATADPNIVTCGNGAGNTFSGCGGNANNTQQC
        MGGRSSFCGLTMVVVVVMSITILSSSYSCRGSILMKANATLGSVMTTELII HDITRYLIFKGATAVTGATADPNIVTCGNGAGNTFSGCGGNANNTQQC
Subjt:  MGGRSSFCGLTMVVVVVMSITILSSSYSCRGSILMKANATLGSVMTTELIINHDITRYLIFKGATAVTGATADPNIVTCGNGAGNTFSGCGGNANNTQQC

Query:  NAYQGPNACL
        NAYQGPNACL
Subjt:  NAYQGPNACL

TrEMBL top hitse value%identityAlignment
A0A0A0KSJ4 Uncharacterized protein4.6e-2658.77Show/hide
Query:  MGGR----SSFCGLTMVVVVVMSITILSSSYSCRGSILMKANATLGSVMTTELIINHDITRYLIFKGATAVTGATADPNIVTCGNGAGNTFSGCGGNANN
        MG R    SSF GLTMVVVV+M ITIL SS++CR S+L+KANAT G VMT EL+I  D+TRYL++  A + TG T D  +V C NG GN+FSGCGG+++N
Subjt:  MGGR----SSFCGLTMVVVVVMSITILSSSYSCRGSILMKANATLGSVMTTELIINHDITRYLIFKGATAVTGATADPNIVTCGNGAGNTFSGCGGNANN

Query:  TQQCNAYQGPNACL
         +QCNAY  P  C+
Subjt:  TQQCNAYQGPNACL

A0A0A0KUG7 Uncharacterized protein2.8e-5299.09Show/hide
Query:  MGGRSSFCGLTMVVVVVMSITILSSSYSCRGSILMKANATLGSVMTTELIINHDITRYLIFKGATAVTGATADPNIVTCGNGAGNTFSGCGGNANNTQQC
        MGGRSSFCGLTMVVVVVMSITILSSSYSCRGSILMKANATLGSVMTTELII HDITRYLIFKGATAVTGATADPNIVTCGNGAGNTFSGCGGNANNTQQC
Subjt:  MGGRSSFCGLTMVVVVVMSITILSSSYSCRGSILMKANATLGSVMTTELIINHDITRYLIFKGATAVTGATADPNIVTCGNGAGNTFSGCGGNANNTQQC

Query:  NAYQGPNACL
        NAYQGPNACL
Subjt:  NAYQGPNACL

A0A0A0KVT8 Uncharacterized protein3.5e-2663.3Show/hide
Query:  MGGRSSFCGLTMVVVVVMSITILSSSYSCRGSILMKANATLGSVMTTELIINHDITRYLIFKGATAVTGATADPNIVTCGNGAGNTFSGCGGNANNTQQC
        MG RSSF GLTM VVVVM ITIL SS+SCRGS+L+KANAT   VMT EL+I  DI R+L+  G+ A TG T + N+V CGNGAGNT++ CGG+ +N  +C
Subjt:  MGGRSSFCGLTMVVVVVMSITILSSSYSCRGSILMKANATLGSVMTTELIINHDITRYLIFKGATAVTGATADPNIVTCGNGAGNTFSGCGGNANNTQQC

Query:  NAYQGPNAC
        +AY+GPNAC
Subjt:  NAYQGPNAC

A0A5D3BNE4 Uncharacterized protein2.0e-3473.39Show/hide
Query:  MGGRSSFCGLTMVVVVVMSITILSSSYSCRGSILMKANATLGSVMTTELIINHDITRYLIFKGATAVTGATADPNIVTCGNGAGNTFSGCGGNANNTQQC
        MGGRSSFCGLTMVVVVVMSITILSSSYSCRGS+LMKANAT G V TTE+II HDITR+L+  G+  VTG T +PNIV C NG GN F  CGGNANN QQC
Subjt:  MGGRSSFCGLTMVVVVVMSITILSSSYSCRGSILMKANATLGSVMTTELIINHDITRYLIFKGATAVTGATADPNIVTCGNGAGNTFSGCGGNANNTQQC

Query:  NAYQGPNAC
        N Y     C
Subjt:  NAYQGPNAC

A0A5D3BR80 Uncharacterized protein3.7e-2864.22Show/hide
Query:  MGGRSSFCGLTMVVVVVMSITILSSSYSCRGSILMKANATLGSVMTTELIINHDITRYLIFKGATAVTGATADPNIVTCGNGAGNTFSGCGGNANNTQQC
        MG RSSF GLTM VVV+M ITI  SS+SCRGS+L+KANAT   VMT EL+I  DI RYL+F G  A TG T D N+V CGNGAGN+F+GC G+ +N ++C
Subjt:  MGGRSSFCGLTMVVVVVMSITILSSSYSCRGSILMKANATLGSVMTTELIINHDITRYLIFKGATAVTGATADPNIVTCGNGAGNTFSGCGGNANNTQQC

Query:  NAYQGPNAC
        NAY+GP AC
Subjt:  NAYQGPNAC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGGCCGTTCTTCGTTTTGTGGGTTAACAATGGTGGTGGTGGTGGTGATGTCGATAACCATCCTGAGTTCCAGCTACAGCTGCAGAGGTTCGATTCTGATGAAGGC
CAACGCCACGTTGGGTAGCGTGATGACGACCGAGTTGATCATCAACCACGATATAACTCGGTATCTCATATTCAAGGGTGCCACCGCAGTGACAGGTGCGACTGCGGACC
CAAACATCGTGACATGTGGCAATGGCGCCGGAAACACGTTTTCCGGCTGCGGTGGTAATGCTAATAATACACAACAGTGCAATGCATACCAAGGACCTAACGCTTGCTTA
TAA
mRNA sequenceShow/hide mRNA sequence
AATTAATTAACATAAGCTAATTTGAGATTTTAATCGAACAATTATAAATTTCACACTCAAAAGTTCCTAATATAATTTTAACTTATTGTTTTAAATAATTAAATAGCATT
TTAAATTTAAAAATGCTCATAATTAAACTTATTTGAGTGAAAAAGAAAAAGAGAACCCAAAGCAAAAGAGAACCCAAAGCAAAGAAAAAGCAAAAGCAAACAGCAATAAT
GGAGAGACCATTGCTTCTATGTTCACTATCTGTATAAGTCTCCCCCTTCGCATACGAACAGACCAAGAAACAGAGAGCCAAAAATGGGAGGCCGTTCTTCGTTTTGTGGG
TTAACAATGGTGGTGGTGGTGGTGATGTCGATAACCATCCTGAGTTCCAGCTACAGCTGCAGAGGTTCGATTCTGATGAAGGCCAACGCCACGTTGGGTAGCGTGATGAC
GACCGAGTTGATCATCAACCACGATATAACTCGGTATCTCATATTCAAGGGTGCCACCGCAGTGACAGGTGCGACTGCGGACCCAAACATCGTGACATGTGGCAATGGCG
CCGGAAACACGTTTTCCGGCTGCGGTGGTAATGCTAATAATACACAACAGTGCAATGCATACCAAGGACCTAACGCTTGCTTATAATCCCTTCAGTTCCATATTAATATG
ATCACTATGACTCTGCGCAGTTTCTATGTCATCGTGTAATCCCCTGTTTTTTATGATCCTCTGTTCTTCTTTCTATTTCTCTTTGAAGTGGAGTTTGTTTGTTTGATGCT
TTCATTAACAATGTATTTGGTGCTTTGTTGTTTGTTTTTGTGAAATAAGAACTAAATCAAATCACTTTTCTTCTTCTCTCTCTTGTTCAATCCATTGATCCTGTAAGTAT
TTTCGTAATATAGATTAAATTGTTAC
Protein sequenceShow/hide protein sequence
MGGRSSFCGLTMVVVVVMSITILSSSYSCRGSILMKANATLGSVMTTELIINHDITRYLIFKGATAVTGATADPNIVTCGNGAGNTFSGCGGNANNTQQCNAYQGPNACL