CuGenDBv2

Gene ID	CSPI05G30000
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	thylakoid membrane protein slr0575
Genome location	Chr5:28032657..28038073
RNA-Seq Expression	CSPI05G30000
Synteny	CSPI05G30000
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR021275 - Protein of unknown function DUF2854

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0039379.1 thylakoid membrane protein [Cucumis melo var. makuwa]

9.8e-155

95.92

Show/hide

Query:  MSITAISPTPGLSTCSHDQFTLSNRLSLVSLPFSRPNRTISLPGGANFIARTNVFVHFETTTLLHKPHRLAFSFSTRAADSTQPSAVSASPGKAVVTDDE
        MSITAISPTPGLST SH QFTLSNRLSL+SLPFSRPNR ISLPGG NFIARTNVFVHFET TLLHKPHRLAF+FSTRAADSTQPSAVSASP KAVVTDDE
Subjt:  MSITAISPTPGLSTCSHDQFTLSNRLSLVSLPFSRPNRTISLPGGANFIARTNVFVHFETTTLLHKPHRLAFSFSTRAADSTQPSAVSASPGKAVVTDDE

Query:  FSLAKVSFGVIGLGVGVSLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATPILKQVRDDVIRFRYGDEQHL
        FSLAKVSFGVIGLGVGVSLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATPILKQVRDDVIRFRYGDEQHL
Subjt:  FSLAKVSFGVIGLGVGVSLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATPILKQVRDDVIRFRYGDEQHL

Query:  DEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEKRQAKFASFFGPGITAEVGKGENDLYEVRLTSNTIPGASP
        DEALKRIFQYGLAGGIPRRSAPIL+SIREEVTEDGKYCLVLVFEAKALTLSDFE+RQAKFASFFGPGITAEVGKGENDLYEVRL SN+IPGASP
Subjt:  DEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEKRQAKFASFFGPGITAEVGKGENDLYEVRLTSNTIPGASP

XP_004141498.1 uncharacterized protein LOC101213350 [Cucumis sativus]

4.9e-162

100

Show/hide

Query:  MSITAISPTPGLSTCSHDQFTLSNRLSLVSLPFSRPNRTISLPGGANFIARTNVFVHFETTTLLHKPHRLAFSFSTRAADSTQPSAVSASPGKAVVTDDE
        MSITAISPTPGLSTCSHDQFTLSNRLSLVSLPFSRPNRTISLPGGANFIARTNVFVHFETTTLLHKPHRLAFSFSTRAADSTQPSAVSASPGKAVVTDDE
Subjt:  MSITAISPTPGLSTCSHDQFTLSNRLSLVSLPFSRPNRTISLPGGANFIARTNVFVHFETTTLLHKPHRLAFSFSTRAADSTQPSAVSASPGKAVVTDDE

Query:  FSLAKVSFGVIGLGVGVSLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATPILKQVRDDVIRFRYGDEQHL
        FSLAKVSFGVIGLGVGVSLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATPILKQVRDDVIRFRYGDEQHL
Subjt:  FSLAKVSFGVIGLGVGVSLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATPILKQVRDDVIRFRYGDEQHL

Query:  DEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEKRQAKFASFFGPGITAEVGKGENDLYEVRLTSNTIPGASP
        DEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEKRQAKFASFFGPGITAEVGKGENDLYEVRLTSNTIPGASP
Subjt:  DEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEKRQAKFASFFGPGITAEVGKGENDLYEVRLTSNTIPGASP

XP_008459460.1 PREDICTED: thylakoid membrane protein slr0575 [Cucumis melo]

3.7e-154

95.58

Show/hide

Query:  MSITAISPTPGLSTCSHDQFTLSNRLSLVSLPFSRPNRTISLPGGANFIARTNVFVHFETTTLLHKPHRLAFSFSTRAADSTQPSAVSASPGKAVVTDDE
        MSITAISPTPGLST SH QFTLSNRLSL+SLPFSRPNR I LPGG NFIARTNVFVHFET TLLHKPHRLAF+FSTRAADSTQPSAVSASP KAVVTDDE
Subjt:  MSITAISPTPGLSTCSHDQFTLSNRLSLVSLPFSRPNRTISLPGGANFIARTNVFVHFETTTLLHKPHRLAFSFSTRAADSTQPSAVSASPGKAVVTDDE

Query:  FSLAKVSFGVIGLGVGVSLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATPILKQVRDDVIRFRYGDEQHL
        FSLAKVSFGVIGLGVGVSLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATPILKQVRDDVIRFRYGDEQHL
Subjt:  FSLAKVSFGVIGLGVGVSLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATPILKQVRDDVIRFRYGDEQHL

Query:  DEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEKRQAKFASFFGPGITAEVGKGENDLYEVRLTSNTIPGASP
        DEALKRIFQYGLAGGIPRRSAPIL+SIREEVTEDGKYCLVLVFEAKALTLSDFE+RQAKFASFFGPGITAEVGKGENDLYEVRL SN+IPGASP
Subjt:  DEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEKRQAKFASFFGPGITAEVGKGENDLYEVRLTSNTIPGASP

XP_023524489.1 uncharacterized protein LOC111788387 [Cucurbita pepo subsp. pepo]

1.7e-135

85.62

Show/hide

Query:  ITAISPTPGLSTCSHDQFTLSNRLSLVSLPFSRPNRTISLPGGANFIARTNVFVHFETTTLLHKPHRLAFSFSTRAADSTQPSAVSASPGKAVVTDDEFS
        ++ ISP   L  CSHD+FTL NRLSLVSL FSRP    SLPGG N+  R N FVHFE    L KP RLAF+FS RAAD+TQPS+VSASP KAVVTDDEFS
Subjt:  ITAISPTPGLSTCSHDQFTLSNRLSLVSLPFSRPNRTISLPGGANFIARTNVFVHFETTTLLHKPHRLAFSFSTRAADSTQPSAVSASPGKAVVTDDEFS

Query:  LAKVSFGVIGLGVGVSLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATPILKQVRDDVIRFRYGDEQHLDE
        LAKVSFGVIGLGVG+SLLSYGFGAYFN+LPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYL+AQKLRE+CATPILKQVRDDV+R+RYGDEQHLDE
Subjt:  LAKVSFGVIGLGVGVSLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATPILKQVRDDVIRFRYGDEQHLDE

Query:  ALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEKRQAKFASFFGPGITAEVGKGENDLYEVRLTSNTIPGASP
        ALKRIFQ+GLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEKRQAKFASFFGPGI AEVGKG+NDLYEVRL SNTIPGASP
Subjt:  ALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEKRQAKFASFFGPGITAEVGKGENDLYEVRLTSNTIPGASP

XP_038890554.1 thylakoid membrane protein slr0575-like [Benincasa hispida]

1.9e-137

87.24

Show/hide

Query:  MSITAISPTPGLSTCSHDQFTLSNRLSLVSLPFSRPNRTISLPGGANFIARTNVFVHFETTTLLHKPHRLAFSFSTRAADSTQPSAVSASPGKAVVTDDE
        MSI+ ISPTPGL +CSHDQFTL NRLS++SL FSRP RTIS PGG NFI R N  VHFE  TLL KP RLAF+FS RAADSTQPS+VSASP KAVV+DDE
Subjt:  MSITAISPTPGLSTCSHDQFTLSNRLSLVSLPFSRPNRTISLPGGANFIARTNVFVHFETTTLLHKPHRLAFSFSTRAADSTQPSAVSASPGKAVVTDDE

Query:  FSLAKVSFGVIGLGVGVSLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATPILKQVRDDVIRFRYGDEQHL
        FSLAKVSFGVIGLGVG+SLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTY DAQKLRETCATPILKQVRDDVIRFRYGDEQHL
Subjt:  FSLAKVSFGVIGLGVGVSLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATPILKQVRDDVIRFRYGDEQHL

Query:  DEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEKRQAKFASFFGPGITAEVGKGENDLYEVRLTSNTIP
        DEALKRIFQYG+AGGIPRRSAPILQSIREEV EDGKYCLVLVFEAKALTLSDFE+RQAKFASFFGPGITAEVGKGE DLYE  L     P
Subjt:  DEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEKRQAKFASFFGPGITAEVGKGENDLYEVRLTSNTIP

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KVX1 Uncharacterized protein

2.4e-162

100

Show/hide

Query:  MSITAISPTPGLSTCSHDQFTLSNRLSLVSLPFSRPNRTISLPGGANFIARTNVFVHFETTTLLHKPHRLAFSFSTRAADSTQPSAVSASPGKAVVTDDE
        MSITAISPTPGLSTCSHDQFTLSNRLSLVSLPFSRPNRTISLPGGANFIARTNVFVHFETTTLLHKPHRLAFSFSTRAADSTQPSAVSASPGKAVVTDDE
Subjt:  MSITAISPTPGLSTCSHDQFTLSNRLSLVSLPFSRPNRTISLPGGANFIARTNVFVHFETTTLLHKPHRLAFSFSTRAADSTQPSAVSASPGKAVVTDDE

Query:  FSLAKVSFGVIGLGVGVSLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATPILKQVRDDVIRFRYGDEQHL
        FSLAKVSFGVIGLGVGVSLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATPILKQVRDDVIRFRYGDEQHL
Subjt:  FSLAKVSFGVIGLGVGVSLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATPILKQVRDDVIRFRYGDEQHL

Query:  DEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEKRQAKFASFFGPGITAEVGKGENDLYEVRLTSNTIPGASP
        DEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEKRQAKFASFFGPGITAEVGKGENDLYEVRLTSNTIPGASP
Subjt:  DEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEKRQAKFASFFGPGITAEVGKGENDLYEVRLTSNTIPGASP

A0A1S3CAR1 thylakoid membrane protein slr0575

1.8e-154

95.58

Show/hide

Query:  MSITAISPTPGLSTCSHDQFTLSNRLSLVSLPFSRPNRTISLPGGANFIARTNVFVHFETTTLLHKPHRLAFSFSTRAADSTQPSAVSASPGKAVVTDDE
        MSITAISPTPGLST SH QFTLSNRLSL+SLPFSRPNR I LPGG NFIARTNVFVHFET TLLHKPHRLAF+FSTRAADSTQPSAVSASP KAVVTDDE
Subjt:  MSITAISPTPGLSTCSHDQFTLSNRLSLVSLPFSRPNRTISLPGGANFIARTNVFVHFETTTLLHKPHRLAFSFSTRAADSTQPSAVSASPGKAVVTDDE

Query:  FSLAKVSFGVIGLGVGVSLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATPILKQVRDDVIRFRYGDEQHL
        FSLAKVSFGVIGLGVGVSLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATPILKQVRDDVIRFRYGDEQHL
Subjt:  FSLAKVSFGVIGLGVGVSLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATPILKQVRDDVIRFRYGDEQHL

Query:  DEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEKRQAKFASFFGPGITAEVGKGENDLYEVRLTSNTIPGASP
        DEALKRIFQYGLAGGIPRRSAPIL+SIREEVTEDGKYCLVLVFEAKALTLSDFE+RQAKFASFFGPGITAEVGKGENDLYEVRL SN+IPGASP
Subjt:  DEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEKRQAKFASFFGPGITAEVGKGENDLYEVRLTSNTIPGASP

A0A5A7TDN5 Thylakoid membrane protein

4.8e-155

95.92

Show/hide

Query:  MSITAISPTPGLSTCSHDQFTLSNRLSLVSLPFSRPNRTISLPGGANFIARTNVFVHFETTTLLHKPHRLAFSFSTRAADSTQPSAVSASPGKAVVTDDE
        MSITAISPTPGLST SH QFTLSNRLSL+SLPFSRPNR ISLPGG NFIARTNVFVHFET TLLHKPHRLAF+FSTRAADSTQPSAVSASP KAVVTDDE
Subjt:  MSITAISPTPGLSTCSHDQFTLSNRLSLVSLPFSRPNRTISLPGGANFIARTNVFVHFETTTLLHKPHRLAFSFSTRAADSTQPSAVSASPGKAVVTDDE

Query:  FSLAKVSFGVIGLGVGVSLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATPILKQVRDDVIRFRYGDEQHL
        FSLAKVSFGVIGLGVGVSLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATPILKQVRDDVIRFRYGDEQHL
Subjt:  FSLAKVSFGVIGLGVGVSLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATPILKQVRDDVIRFRYGDEQHL

Query:  DEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEKRQAKFASFFGPGITAEVGKGENDLYEVRLTSNTIPGASP
        DEALKRIFQYGLAGGIPRRSAPIL+SIREEVTEDGKYCLVLVFEAKALTLSDFE+RQAKFASFFGPGITAEVGKGENDLYEVRL SN+IPGASP
Subjt:  DEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEKRQAKFASFFGPGITAEVGKGENDLYEVRLTSNTIPGASP

A0A6J1GWV5 uncharacterized protein LOC111458174

1.1e-135

86.3

Show/hide

Query:  ITAISPTPGLSTCSHDQFTLSNRLSLVSLPFSRPNRTISLPGGANFIARTNVFVHFETTTLLHKPHRLAFSFSTRAADSTQPSAVSASPGKAVVTDDEFS
        ++ ISP   L  CSHD+FTL NRLSLVSL FSRP    SLPGG N   R N FVHFE    L KP RLAF+FS RAAD+TQPS+VSASP KAVVTDDEFS
Subjt:  ITAISPTPGLSTCSHDQFTLSNRLSLVSLPFSRPNRTISLPGGANFIARTNVFVHFETTTLLHKPHRLAFSFSTRAADSTQPSAVSASPGKAVVTDDEFS

Query:  LAKVSFGVIGLGVGVSLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATPILKQVRDDVIRFRYGDEQHLDE
        LAKVSFGVIGLGVG+SLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYL+AQKLRE+CATPILKQVRDDVIR+RYGDEQHLDE
Subjt:  LAKVSFGVIGLGVGVSLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATPILKQVRDDVIRFRYGDEQHLDE

Query:  ALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEKRQAKFASFFGPGITAEVGKGENDLYEVRLTSNTIPGASP
        ALKRIFQ+GLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEKRQAKFASFFGPGI AEVGKG+NDLYEVRL SNTIPGASP
Subjt:  ALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEKRQAKFASFFGPGITAEVGKGENDLYEVRLTSNTIPGASP

A0A6J1JQQ4 uncharacterized protein LOC111486968

1.2e-134

85.62

Show/hide

Query:  ITAISPTPGLSTCSHDQFTLSNRLSLVSLPFSRPNRTISLPGGANFIARTNVFVHFETTTLLHKPHRLAFSFSTRAADSTQPSAVSASPGKAVVTDDEFS
        ++ ISP   L  CSHD+FTL NRLSLVSL FSRP    SLPGG N   R N FVH E    L KP RLAF+FS RAAD+TQPS+VSASP KAVVTDDEFS
Subjt:  ITAISPTPGLSTCSHDQFTLSNRLSLVSLPFSRPNRTISLPGGANFIARTNVFVHFETTTLLHKPHRLAFSFSTRAADSTQPSAVSASPGKAVVTDDEFS

Query:  LAKVSFGVIGLGVGVSLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATPILKQVRDDVIRFRYGDEQHLDE
        LAKVSFGVIGLGVG+SLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYL+AQKLRE+CATPILKQVRDDVIR+RYGDEQHLDE
Subjt:  LAKVSFGVIGLGVGVSLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATPILKQVRDDVIRFRYGDEQHLDE

Query:  ALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEKRQAKFASFFGPGITAEVGKGENDLYEVRLTSNTIPGASP
        ALKRIFQ+GLAGGIPRRSAPILQSIREEVTEDGKYCLVL+FEAKALTLSDFEKRQAKFASFFGPGI AEVGKG+NDLYEVRL SNTIPGASP
Subjt:  ALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEKRQAKFASFFGPGITAEVGKGENDLYEVRLTSNTIPGASP

SwissProt top hits

e value

%identity

Alignment

Q55403 Thylakoid membrane protein slr0575

1.9e-23

40.11

Show/hide

Query:  LAKVSFGVIGLGVGVSLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQK---LRETCATPILKQVRDDVIRFRYGDEQH
        L K+S   +GL VG  L   GF AY   L  +  +     YG PL + G+ALK AELKP+P  +   ++K   LR   ATP   Q+R DV R+RYG E H
Subjt:  LAKVSFGVIGLGVGVSLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQK---LRETCATPILKQVRDDVIRFRYGDEQH

Query:  LDEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEKRQAKFASFFGPGITAEVGKGENDLYEVRLTS
        LDE+L+R+   GL+     R  P+L S+ E+  E GKY L L F +  ++L  ++++Q K A FFGP +   V + E  +  V L S
Subjt:  LDEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEKRQAKFASFFGPGITAEVGKGENDLYEVRLTS

Arabidopsis top hits

e value

%identity

Alignment

AT5G38660.1 acclimation of photosynthesis to environment

2.1e-94

81.6

Show/hide

Query:  RAADSTQPSAVSASPGKAVVTDDEFSLAKVSFGVIGLGVGVSLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRET
        RAADST  S   AS  + ++ DDEF+LAK+SFGVIGLG+GVSLLSYGFGAYF ILPG+EWSAIMLTYGFPL+IIGMALKYAELKPVPCL+Y DA KLRE+
Subjt:  RAADSTQPSAVSASPGKAVVTDDEFSLAKVSFGVIGLGVGVSLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRET

Query:  CATPILKQVRDDVIRFRYGDEQHLDEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEKRQAKFASFFGPGITAEVGKGE
        CATPIL QVR+DV R+RYGDEQHL+EALKRIFQYGL GGIPRRSAPILQ IREEV  DG+YC+VLVFEAKALTLSDFEKRQAKF SFFGP ITAEVGKGE
Subjt:  CATPILKQVRDDVIRFRYGDEQHLDEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEKRQAKFASFFGPGITAEVGKGE

Query:  ND-LYEVRLTSN
        ++ LYEVRL SN
Subjt:  ND-LYEVRLTSN

AT5G38660.2 acclimation of photosynthesis to environment

3.8e-88

82.14

Show/hide

Query:  RAADSTQPSAVSASPGKAVVTDDEFSLAKVSFGVIGLGVGVSLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRET
        RAADST  S   AS  + ++ DDEF+LAK+SFGVIGLG+GVSLLSYGFGAYF ILPG+EWSAIMLTYGFPL+IIGMALKYAELKPVPCL+Y DA KLRE+
Subjt:  RAADSTQPSAVSASPGKAVVTDDEFSLAKVSFGVIGLGVGVSLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRET

Query:  CATPILKQVRDDVIRFRYGDEQHLDEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEKRQAKFASFFGPGITAEV
        CATPIL QVR+DV R+RYGDEQHL+EALKRIFQYGL GGIPRRSAPILQ IREEV  DG+YC+VLVFEAKALTLSDFEKRQAKF SFFGP ITAEV
Subjt:  CATPILKQVRDDVIRFRYGDEQHLDEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEKRQAKFASFFGPGITAEV

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTCAATCACTGCAATATCTCCAACTCCAGGACTTTCTACCTGCTCCCATGATCAATTCACTCTCTCCAATCGCCTTTCCCTTGTTTCTCTCCCTTTCTCTCGTCCTAA
CCGCACAATTTCCCTTCCCGGCGGTGCCAATTTCATCGCCAGAACCAACGTTTTTGTCCATTTTGAAACGACAACGCTTCTGCACAAGCCTCACCGATTAGCTTTCTCTT
TCTCCACTCGTGCTGCTGATTCTACGCAGCCCTCTGCAGTTTCAGCTTCGCCGGGTAAAGCAGTAGTTACTGACGATGAATTCTCGCTTGCGAAGGTTTCATTTGGTGTT
ATTGGCTTAGGTGTTGGGGTTTCTTTGTTGTCGTATGGATTCGGTGCATACTTTAATATCCTCCCGGGATCTGAATGGTCTGCCATTATGCTAACATATGGCTTCCCTCT
TGCTATTATTGGCATGGCTCTAAAGTATGCTGAACTCAAACCAGTGCCATGCTTGACATACTTAGATGCTCAAAAACTGAGGGAAACATGCGCCACACCAATTCTTAAAC
AGGTAAGAGACGATGTTATTAGGTTTCGTTATGGGGATGAACAACACTTGGATGAGGCGTTGAAACGGATTTTCCAGTATGGCCTGGCTGGGGGAATTCCTCGACGGAGT
GCACCTATTTTGCAAAGTATACGTGAAGAAGTCACAGAAGATGGAAAGTATTGCCTGGTCTTGGTGTTCGAAGCCAAAGCCTTGACACTGTCAGATTTTGAGAAAAGACA
GGCCAAATTTGCTTCTTTCTTTGGACCAGGGATCACTGCAGAAGTTGGGAAAGGAGAGAATGATTTGTATGAAGTCCGGCTTACTTCTAACACTATTCCCGGTGCTTCAC
CGTGA

mRNA sequence

Show/hide mRNA sequence

AATTTGGCGGGTTTAGAGAAACGAATCCCATTCTCGTTTCTTTCTAACCAACCGAGCTGAGCTGAGCTTTGCTTTGCTTTGCTTTCCACTCCGTTCATCAGAGCTTCACA
GATTCAATCAAGAGATTCAATGTCAATCACTGCAATATCTCCAACTCCAGGACTTTCTACCTGCTCCCATGATCAATTCACTCTCTCCAATCGCCTTTCCCTTGTTTCTC
TCCCTTTCTCTCGTCCTAACCGCACAATTTCCCTTCCCGGCGGTGCCAATTTCATCGCCAGAACCAACGTTTTTGTCCATTTTGAAACGACAACGCTTCTGCACAAGCCT
CACCGATTAGCTTTCTCTTTCTCCACTCGTGCTGCTGATTCTACGCAGCCCTCTGCAGTTTCAGCTTCGCCGGGTAAAGCAGTAGTTACTGACGATGAATTCTCGCTTGC
GAAGGTTTCATTTGGTGTTATTGGCTTAGGTGTTGGGGTTTCTTTGTTGTCGTATGGATTCGGTGCATACTTTAATATCCTCCCGGGATCTGAATGGTCTGCCATTATGC
TAACATATGGCTTCCCTCTTGCTATTATTGGCATGGCTCTAAAGTATGCTGAACTCAAACCAGTGCCATGCTTGACATACTTAGATGCTCAAAAACTGAGGGAAACATGC
GCCACACCAATTCTTAAACAGGTAAGAGACGATGTTATTAGGTTTCGTTATGGGGATGAACAACACTTGGATGAGGCGTTGAAACGGATTTTCCAGTATGGCCTGGCTGG
GGGAATTCCTCGACGGAGTGCACCTATTTTGCAAAGTATACGTGAAGAAGTCACAGAAGATGGAAAGTATTGCCTGGTCTTGGTGTTCGAAGCCAAAGCCTTGACACTGT
CAGATTTTGAGAAAAGACAGGCCAAATTTGCTTCTTTCTTTGGACCAGGGATCACTGCAGAAGTTGGGAAAGGAGAGAATGATTTGTATGAAGTCCGGCTTACTTCTAAC
ACTATTCCCGGTGCTTCACCGTGATAAAGTATATGGTGTAATCAAATTCTGCTACATATAATGGTTTCATTTAGTATACAAACTGCTGTCCACTTGTGAAGTTCTGGTAA
GTATATATTCCTTTCAAAATCCCTGCAATGGAAATATTAAATTTGGTCTCTAATGTTTGTAACACGTGAAAAAAATATAGACAAAACTCAAAAGATTTAGAAAGAGAAAA
AAAATGACATCCAAATGGGTTCCTTCCTGAATTTTAGAATTGCAAAATCACTTCATTCTTAAAATAGAAACAGGACATTCTACCTTAGCTTTACCTATTCCGGAACTTTT
TCACATGAGGCATGCATAGTTATTTGATTAACGAACTTTCCCTTAGAATAGTCACAGAATTATGAAATGTGCCCTTGCGAACTGGAAACTACGGCCTAAAAAGCACCCAA
TGTGGAACACGTCCCATAAGCATGGTGCATTTCGGGGATGTGAATGCCAATGTTGATTATAGTTTTTGCCACAA

Protein sequence

Show/hide protein sequence

MSITAISPTPGLSTCSHDQFTLSNRLSLVSLPFSRPNRTISLPGGANFIARTNVFVHFETTTLLHKPHRLAFSFSTRAADSTQPSAVSASPGKAVVTDDEFSLAKVSFGV
IGLGVGVSLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATPILKQVRDDVIRFRYGDEQHLDEALKRIFQYGLAGGIPRRS
APILQSIREEVTEDGKYCLVLVFEAKALTLSDFEKRQAKFASFFGPGITAEVGKGENDLYEVRLTSNTIPGASP

CSPI05G30000 (gene) of Cucumber (PI 183967) v1 genome