CuGenDBv2

Gene ID	CSPI05G30060
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	COX assembly mitochondrial protein
Genome location	Chr5:28083595..28087238
RNA-Seq Expression	CSPI05G30060
Synteny	CSPI05G30060
Gene Ontology terms	GO:0005739 - mitochondrion (cellular component)
InterPro domains	IPR013892 - Cytochrome c oxidase biogenesis protein Cmc1-like

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6578501.1 hypothetical protein SDJN03_22949, partial [Cucurbita argyrosperma subsp. sororia]

1.9e-40

93.26

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Query:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGRTLSVVFKCRNQAKELNNCLHSYTNDSILDEMKREYALQQDGKP
        MGYIQEARENHVKKKVEEALRSKMKQKA+KECDHYASKYAECAYGRTLSVVFKCRNQAKELNNCLH YTND++L+EMKREYALQ DGKP
Subjt:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGRTLSVVFKCRNQAKELNNCLHSYTNDSILDEMKREYALQQDGKP

XP_004141503.1 uncharacterized protein DDB_G0275933 [Cucumis sativus]

1.0e-41

98.88

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Query:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGRTLSVVFKCRNQAKELNNCLHSYTNDSILDEMKREYALQQDGKP
        MGYIQEARENHVKKKVEEALRSKMKQKALKECD YASKYAECAYGRTLSVVFKCRNQAKELNNCLHSYTNDSILDEMKREYALQQDGKP
Subjt:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGRTLSVVFKCRNQAKELNNCLHSYTNDSILDEMKREYALQQDGKP

XP_008459466.1 PREDICTED: uncharacterized protein DDB_G0275933 [Cucumis melo]

3.8e-41

95.51

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Query:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGRTLSVVFKCRNQAKELNNCLHSYTNDSILDEMKREYALQQDGKP
        MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGRTLSV+FKCRNQAKELNNCLH YTNDS+LDEMKREYALQ DGKP
Subjt:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGRTLSVVFKCRNQAKELNNCLHSYTNDSILDEMKREYALQQDGKP

XP_022993759.1 uncharacterized protein DDB_G0275933 [Cucurbita maxima]

1.9e-40

93.26

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Query:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGRTLSVVFKCRNQAKELNNCLHSYTNDSILDEMKREYALQQDGKP
        MGYIQEARENHVKKKVEEALRSKMKQKA+KECDHYASKYAECAYGRTLSVVFKCRNQAKELNNCLH YTND++L+EMKREYALQ DGKP
Subjt:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGRTLSVVFKCRNQAKELNNCLHSYTNDSILDEMKREYALQQDGKP

XP_023549716.1 uncharacterized protein DDB_G0275933 [Cucurbita pepo subsp. pepo]

7.1e-40

92.13

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Query:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGRTLSVVFKCRNQAKELNNCLHSYTNDSILDEMKREYALQQDGKP
        MGYIQEARENHVKKKVEEALRSKMKQKA+KECDHYASKYAECAYGRTLSVVFKCR+QAKELNNCLH YTND++L+EMKREYALQ DGKP
Subjt:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGRTLSVVFKCRNQAKELNNCLHSYTNDSILDEMKREYALQQDGKP

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KVX6 COX assembly mitochondrial protein

4.8e-42

98.88

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Query:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGRTLSVVFKCRNQAKELNNCLHSYTNDSILDEMKREYALQQDGKP
        MGYIQEARENHVKKKVEEALRSKMKQKALKECD YASKYAECAYGRTLSVVFKCRNQAKELNNCLHSYTNDSILDEMKREYALQQDGKP
Subjt:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGRTLSVVFKCRNQAKELNNCLHSYTNDSILDEMKREYALQQDGKP

A0A1S3CA82 COX assembly mitochondrial protein

1.8e-41

95.51

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Query:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGRTLSVVFKCRNQAKELNNCLHSYTNDSILDEMKREYALQQDGKP
        MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGRTLSV+FKCRNQAKELNNCLH YTNDS+LDEMKREYALQ DGKP
Subjt:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGRTLSVVFKCRNQAKELNNCLHSYTNDSILDEMKREYALQQDGKP

A0A6J1BW91 COX assembly mitochondrial protein

2.5e-38

89.77

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Query:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGRTLSVVFKCRNQAKELNNCLHSYTNDSILDEMKREYALQQDGK
        MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYAS+YAECAYGRTLSVV+KCR+QAKELN+CLH YTND++L+EMKR+YALQQDGK
Subjt:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGRTLSVVFKCRNQAKELNNCLHSYTNDSILDEMKREYALQQDGK

A0A6J1FIP8 COX assembly mitochondrial protein

5.9e-40

92.13

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Query:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGRTLSVVFKCRNQAKELNNCLHSYTNDSILDEMKREYALQQDGKP
        MGYIQEARENHVKKKVEEALRSKMKQKA+KECDHYASKYAECAYGRTLSVVFKCRNQAKELNNCLH YTND++L+EMKREYA Q DGKP
Subjt:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGRTLSVVFKCRNQAKELNNCLHSYTNDSILDEMKREYALQQDGKP

A0A6J1K100 COX assembly mitochondrial protein

9.1e-41

93.26

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Query:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGRTLSVVFKCRNQAKELNNCLHSYTNDSILDEMKREYALQQDGKP
        MGYIQEARENHVKKKVEEALRSKMKQKA+KECDHYASKYAECAYGRTLSVVFKCRNQAKELNNCLH YTND++L+EMKREYALQ DGKP
Subjt:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGRTLSVVFKCRNQAKELNNCLHSYTNDSILDEMKREYALQQDGKP

SwissProt top hits

e value

%identity

Alignment

Q552P9 Uncharacterized protein DDB_G0275933

1.7e-07

39.39

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Query:  VEEALRSKMKQKALKECDHYASKYAECAYGRTLSVVFKCRNQAKELNNCLHSYTNDSILDEMKREY
        V+  LR K+K ++LKEC  + + +A+C+  + +SVV++CR   + + NCL  YT    L  MKRE+
Subjt:  VEEALRSKMKQKALKECDHYASKYAECAYGRTLSVVFKCRNQAKELNNCLHSYTNDSILDEMKREY

Arabidopsis top hits

e value

%identity

Alignment

AT5G16060.1 Cytochrome c oxidase biogenesis protein Cmc1-like

1.0e-31

70.93

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Query:  YIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGRTLSVVFKCRNQAKELNNCLHSYTNDSILDEMKREYALQQDGK
        Y+++ARENHVKKKVEEALRSKMK KAL ECD Y SKYA+CA GRT SVV+ CR QA+ELN CLH +TND++L+EMKR Y +Q++GK
Subjt:  YIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGRTLSVVFKCRNQAKELNNCLHSYTNDSILDEMKREYALQQDGK

Sequences

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CDS sequence

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ATGGGTTACATTCAGGAAGCTCGGGAAAATCATGTGAAGAAGAAAGTAGAGGAAGCTTTGCGCAGCAAAATGAAGCAGAAAGCGTTGAAGGAGTGCGATCATTACGCTTC
GAAATATGCTGAATGCGCTTATGGCAGAACGTTATCTGTCGTTTTCAAGTGTCGTAATCAAGCAAAAGAATTGAACAATTGTCTCCACTCATACACTAATGACTCCATAT
TGGACGAGATGAAGCGGGAATATGCACTTCAACAGGATGGGAAGCCTTGA

mRNA sequence

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ATTAAATTTAGGGTTTTGGGTTTTAAGTTTTCAACAAGCAAATAAATAAATAAAATAATAGGAAACTGGAGAATCGGAATTGAGACTCCGGAGTTGGCTTCGAAGGTCCT
ACTTCCGACGAAATCAAGGGGATTTGACTGCTAATTCATGGGTTACATTCAGGAAGCTCGGGAAAATCATGTGAAGAAGAAAGTAGAGGAAGCTTTGCGCAGCAAAATGA
AGCAGAAAGCGTTGAAGGAGTGCGATCATTACGCTTCGAAATATGCTGAATGCGCTTATGGCAGAACGTTATCTGTCGTTTTCAAGTGTCGTAATCAAGCAAAAGAATTG
AACAATTGTCTCCACTCATACACTAATGACTCCATATTGGACGAGATGAAGCGGGAATATGCACTTCAACAGGATGGGAAGCCTTGAGAAAGAGTATAACACTACTCAGT
GAAAACTGAAGATTAATGTTATGTATCAATCTCAGGTGCACTTTCAGATGATTCACTGAAGTATTGATATTAGTAAGACTTGAATGAAAGTTGAGGCTTTTTTTATTTTG
TAATCTGGACAAGCAAAAAAATTCTGATTTTTTGGCATAAGAATGACGTTTGATCTCTTAATGTATAAAATTCAGTGCTATTCTTCTACGTCAAAATCATAATCTTTACC
CTTTTTGCTGAGTTGTCTTCAAAATAAATTT

Protein sequence

Show/hide protein sequence

MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGRTLSVVFKCRNQAKELNNCLHSYTNDSILDEMKREYALQQDGKP

CSPI05G30060 (gene) of Cucumber (PI 183967) v1 genome