; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI05G30240 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G30240
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationChr5:28254594..28256664
RNA-Seq ExpressionCSPI05G30240
SyntenyCSPI05G30240
Gene Ontology termsGO:0009416 - response to light stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7037190.1 Chlorophyll a-b binding protein CP26, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]5.8e-15293.81Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSF---SSRSAPSPSTPATFKTVALFGKKPAAPAKPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
        MASLAASTAAASLGVSEMLRNPLSF   S+RSA S S+P T K VA+FGKKPAA  KPKPSA SP NDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
Subjt:  MASLAASTAAASLGVSEMLRNPLSF---SSRSAPSPSTPATFKTVALFGKKPAAPAKPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV

Query:  PGDYGYDPFGLSKKPEDFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYR
        PGDYGYDPFGLSKKPEDF+KYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAV AEVVLVGGAEYYR
Subjt:  PGDYGYDPFGLSKKPEDFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYR

Query:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
        IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPF NNLLTVISGNAERVPTL
Subjt:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL

XP_004141516.1 chlorophyll a-b binding protein CP26, chloroplastic [Cucumis sativus]9.6e-163100Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSFSSRSAPSPSTPATFKTVALFGKKPAAPAKPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGD
        MASLAASTAAASLGVSEMLRNPLSFSSRSAPSPSTPATFKTVALFGKKPAAPAKPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGD
Subjt:  MASLAASTAAASLGVSEMLRNPLSFSSRSAPSPSTPATFKTVALFGKKPAAPAKPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGD

Query:  YGYDPFGLSKKPEDFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRIIN
        YGYDPFGLSKKPEDFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRIIN
Subjt:  YGYDPFGLSKKPEDFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRIIN

Query:  GLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
        GLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
Subjt:  GLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL

XP_008459494.1 PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic [Cucumis melo]3.2e-15897.58Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSFSSRSA-PSPSTPATFKTVALFGKKPAAPAKPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPG
        MASLAASTAAASLGVSEMLRNPLSFSSRSA PS S+PATFKTVALFGKKPAAP+KPKP+ ASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPG
Subjt:  MASLAASTAAASLGVSEMLRNPLSFSSRSA-PSPSTPATFKTVALFGKKPAAPAKPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPG

Query:  DYGYDPFGLSKKPEDFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRII
        DYGYDPFGLSKKPEDF+KYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRII
Subjt:  DYGYDPFGLSKKPEDFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRII

Query:  NGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
        NGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
Subjt:  NGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL

XP_022973438.1 chlorophyll a-b binding protein CP26, chloroplastic [Cucurbita maxima]3.4e-15293.81Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSF---SSRSAPSPSTPATFKTVALFGKKPAAPAKPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
        MASLAASTAAASLGVSEMLRNPLS    S+RSA S S+P T K VA+FGKKPAA  KPKPSA SPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
Subjt:  MASLAASTAAASLGVSEMLRNPLSF---SSRSAPSPSTPATFKTVALFGKKPAAPAKPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV

Query:  PGDYGYDPFGLSKKPEDFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYR
        PGDYGYDPFGLSKKPEDF+KYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAV+AEVVLVGGAEYYR
Subjt:  PGDYGYDPFGLSKKPEDFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYR

Query:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
        IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPF NNLLTVISGNAERVPTL
Subjt:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL

XP_038889943.1 chlorophyll a-b binding protein CP26, chloroplastic [Benincasa hispida]4.2e-15896.91Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSF---SSRSAPSPSTPATFKTVALFGKKPAAPAKPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
        MASLAASTAAASLGVSEMLRNPLSF   S+RSAPS S+PATFKTVALFGKKPAAP+KPKPSA SPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
Subjt:  MASLAASTAAASLGVSEMLRNPLSF---SSRSAPSPSTPATFKTVALFGKKPAAPAKPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV

Query:  PGDYGYDPFGLSKKPEDFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYR
        PGDYGYDPFGLSKKPEDF+KYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYR
Subjt:  PGDYGYDPFGLSKKPEDFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYR

Query:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
        IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
Subjt:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL

TrEMBL top hitse value%identityAlignment
A0A0A0KXR5 Chlorophyll a-b binding protein, chloroplastic4.7e-163100Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSFSSRSAPSPSTPATFKTVALFGKKPAAPAKPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGD
        MASLAASTAAASLGVSEMLRNPLSFSSRSAPSPSTPATFKTVALFGKKPAAPAKPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGD
Subjt:  MASLAASTAAASLGVSEMLRNPLSFSSRSAPSPSTPATFKTVALFGKKPAAPAKPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGD

Query:  YGYDPFGLSKKPEDFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRIIN
        YGYDPFGLSKKPEDFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRIIN
Subjt:  YGYDPFGLSKKPEDFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRIIN

Query:  GLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
        GLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
Subjt:  GLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL

A0A1S3CBI9 Chlorophyll a-b binding protein, chloroplastic1.5e-15897.58Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSFSSRSA-PSPSTPATFKTVALFGKKPAAPAKPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPG
        MASLAASTAAASLGVSEMLRNPLSFSSRSA PS S+PATFKTVALFGKKPAAP+KPKP+ ASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPG
Subjt:  MASLAASTAAASLGVSEMLRNPLSFSSRSA-PSPSTPATFKTVALFGKKPAAPAKPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPG

Query:  DYGYDPFGLSKKPEDFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRII
        DYGYDPFGLSKKPEDF+KYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRII
Subjt:  DYGYDPFGLSKKPEDFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRII

Query:  NGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
        NGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
Subjt:  NGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL

A0A6J1DTI7 Chlorophyll a-b binding protein, chloroplastic6.3e-15294.5Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSF---SSRSAPSPSTPATFKTVALFGKKPAAPAKPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
        MASLAASTAAASLGVSEMLRNPLSF   S RSAPS S+  T KTVALFGKKPAA AKP  +A SPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
Subjt:  MASLAASTAAASLGVSEMLRNPLSF---SSRSAPSPSTPATFKTVALFGKKPAAPAKPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV

Query:  PGDYGYDPFGLSKKPEDFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYR
        PGDYGYDPFGLSKKPEDF+KYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYR
Subjt:  PGDYGYDPFGLSKKPEDFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYR

Query:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
        IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGN ERVPTL
Subjt:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL

A0A6J1EWI5 Chlorophyll a-b binding protein, chloroplastic6.3e-15293.81Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSF---SSRSAPSPSTPATFKTVALFGKKPAAPAKPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
        MASLAASTAAASLGVSEMLRNPLSF   S+RSA S S+P T K VALFGKKPA   KPKPSA SP NDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
Subjt:  MASLAASTAAASLGVSEMLRNPLSF---SSRSAPSPSTPATFKTVALFGKKPAAPAKPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV

Query:  PGDYGYDPFGLSKKPEDFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYR
        PGDYGYDPFGLSKKPEDF+KYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAV AEVVLVGGAEYYR
Subjt:  PGDYGYDPFGLSKKPEDFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYR

Query:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
        IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPF NNLLTVISGNAERVPTL
Subjt:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL

A0A6J1ID20 Chlorophyll a-b binding protein, chloroplastic1.7e-15293.81Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSF---SSRSAPSPSTPATFKTVALFGKKPAAPAKPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
        MASLAASTAAASLGVSEMLRNPLS    S+RSA S S+P T K VA+FGKKPAA  KPKPSA SPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
Subjt:  MASLAASTAAASLGVSEMLRNPLSF---SSRSAPSPSTPATFKTVALFGKKPAAPAKPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV

Query:  PGDYGYDPFGLSKKPEDFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYR
        PGDYGYDPFGLSKKPEDF+KYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAV+AEVVLVGGAEYYR
Subjt:  PGDYGYDPFGLSKKPEDFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYR

Query:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
        IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPF NNLLTVISGNAERVPTL
Subjt:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL

SwissProt top hitse value%identityAlignment
P12330 Chlorophyll a-b binding protein 1, chloroplastic4.3e-5750.37Show/hide
Query:  AAASLGVSEMLRNPLSFSSRSAPSPSTPATFKTVALFGKKPAAPAKPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGL
        AAA++ +S  +       +R+APS S+ A F    +  +K AA  KP  S+ SP       WYG DR ++L  G L   E P YL GE PGDYG+D  GL
Subjt:  AAASLGVSEMLRNPLSFSSRSAPSPSTPATFKTVALFGKKPAAPAKPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGL

Query:  SKKPEDFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIA-EVVLVGGAEYYRIINGLNFE
        S  PE F K +  E+IH+RWAMLGA G + PE   + G   G EAVWFK G+ +     L+Y GN   I    I+A+ A +VVL+G  E YRI  G   E
Subjt:  SKKPEDFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIA-EVVLVGGAEYYRIINGLNFE

Query:  --DKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN
          D L+PGG FDPLGLADDP+  A LKVKEIKNGRLAMF+M GF+ QA VTG+GP+ENLA HL+DP  NN
Subjt:  --DKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN

P12331 Chlorophyll a-b binding protein 2, chloroplastic2.1e-5654.42Show/hide
Query:  AKPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPE
        AKPKP+A+       + WYG DR ++L  G L   E P YL GE PGDYG+D  GLS  PE F K +  E+IH+RWAMLGA G + PE   + G   G E
Subjt:  AKPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPE

Query:  AVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIA-EVVLVGGAEYYRIINGLNFE--DKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGF
        AVWFK G+ +     L+Y GN   I    I+A+ A +VVL+G  E YRI  G   E  D L+PGG FDPLGLADDP+  A LKVKEIKNGRLAMF+M GF
Subjt:  AVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIA-EVVLVGGAEYYRIINGLNFE--DKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGF

Query:  YFQAYVTGEGPVENLAKHLSDPFGNN
        + QA VTG+GP+ENLA HL+DP  NN
Subjt:  YFQAYVTGEGPVENLAKHLSDPFGNN

P27497 Chlorophyll a-b binding protein M9, chloroplastic5.6e-5749.43Show/hide
Query:  SEMLRNPLSFSSRSAPSPSTPATFKTVALFGKKPAAPAKPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDF
        S M  +  +F+ ++   PS  + F    +  +K AA AKP  S+ SP       WYGPDR ++L  G L   E P YL GE PGDYG+D  GLS  PE F
Subjt:  SEMLRNPLSFSSRSAPSPSTPATFKTVALFGKKPAAPAKPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDF

Query:  TKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIA-EVVLVGGAEYYRIINGLNFE--DKLHP
         K +  E+IH+RWAMLGA G + PE   + G   G EAVWFK G+ +     L+Y GN   I    I+A+ A +VVL+G  E YR+  G   E  D L+P
Subjt:  TKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIA-EVVLVGGAEYYRIINGLNFE--DKLHP

Query:  GGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN
        GG FDPLGLADDP+  A +KVKE+KNGRLAMF+M GF+ QA VTG+GP+ENLA HL+DP  NN
Subjt:  GGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN

P27517 Chlorophyll a-b binding protein of LHCII type I, chloroplastic2.1e-5649.58Show/hide
Query:  VALFGKKPAAPAKPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFTKYQAFELIHARWAMLGAAGFIIPEA
        +A  G K     + +    + V     ++YGPDR  FL  G    ++ PEYL GE PGDYG+D  GLS  P+ F +Y+  ELIHARWA+LGA G + PE 
Subjt:  VALFGKKPAAPAKPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFTKYQAFELIHARWAMLGAAGFIIPEA

Query:  FNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPI---NLIVAVIAEVVLVGGAEYYRIING----LNFEDKLHPGGPFDPLGLADDPDQAAILKVKEI
         +++      E VWFK GA +     LNY GN   I   ++I  +  +VVL+G AE YR   G    L+  D L+PGGPFDPLGLADDPD  A LKVKEI
Subjt:  FNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPI---NLIVAVIAEVVLVGGAEYYRIING----LNFEDKLHPGGPFDPLGLADDPDQAAILKVKEI

Query:  KNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGN
        KNGRLAMF+ LGF+ QA VTG+GPV+NL  HL+DP  N
Subjt:  KNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGN

Q9XF89 Chlorophyll a-b binding protein CP26, chloroplastic4.0e-13584.34Show/hide
Query:  ASLGVSEMLRNPLSF---SSRSAPSPSTPATFKTVALFGKKPAAPAKPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFG
        ASLGVSEML  PL+F   S  SAP  S+P+TFKTVALF KK  APAK K  A S  +DELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV GDYGYDPFG
Subjt:  ASLGVSEMLRNPLSF---SSRSAPSPSTPATFKTVALFGKKPAAPAKPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFG

Query:  LSKKPEDFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRIINGLNFEDK
        L KKPE+F KYQAFELIHARWAMLGAAGFIIPEA NK+GANCGPEAVWFKTGALLLDGNTLNYFG NIPINL++AV+AEVVL+GGAEYYRI NGL+FEDK
Subjt:  LSKKPEDFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRIINGLNFEDK

Query:  LHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
        LHPGGPFDPLGLA DP+Q A+LKVKEIKNGRLAMFAMLGF+ QAYVTGEGPVENLAKHLSDPFGNNLLTVI+G AER PTL
Subjt:  LHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL

Arabidopsis top hitse value%identityAlignment
AT1G29910.1 chlorophyll A/B binding protein 33.5e-5451.1Show/hide
Query:  AKPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPE
        AKPK  + SP       WYG DR  +L        E P YL GE PGDYG+D  GLS  PE F + +  E+IH+RWAMLGA G + PE   + G   G E
Subjt:  AKPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPE

Query:  AVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIA-EVVLVGGAEYYRII-NGL--NFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLG
        AVWFK G+ +     L+Y GN   +    I+A+ A +V+L+G  E YR+  NG     ED L+PGG FDPLGLA DP+  A LKVKE+KNGRLAMF+M G
Subjt:  AVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIA-EVVLVGGAEYYRII-NGL--NFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLG

Query:  FYFQAYVTGEGPVENLAKHLSDPFGNN
        F+ QA VTG+GP+ENLA HL+DP  NN
Subjt:  FYFQAYVTGEGPVENLAKHLSDPFGNN

AT1G29920.1 chlorophyll A/B-binding protein 23.5e-5451.1Show/hide
Query:  AKPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPE
        AKPK  + SP       WYG DR  +L        E P YL GE PGDYG+D  GLS  PE F + +  E+IH+RWAMLGA G + PE   + G   G E
Subjt:  AKPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPE

Query:  AVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIA-EVVLVGGAEYYRII-NGL--NFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLG
        AVWFK G+ +     L+Y GN   +    I+A+ A +V+L+G  E YR+  NG     ED L+PGG FDPLGLA DP+  A LKVKE+KNGRLAMF+M G
Subjt:  AVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIA-EVVLVGGAEYYRII-NGL--NFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLG

Query:  FYFQAYVTGEGPVENLAKHLSDPFGNN
        F+ QA VTG+GP+ENLA HL+DP  NN
Subjt:  FYFQAYVTGEGPVENLAKHLSDPFGNN

AT1G29930.1 chlorophyll A/B binding protein 13.5e-5451.1Show/hide
Query:  AKPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPE
        AKPK  + SP       WYG DR  +L        E P YL GE PGDYG+D  GLS  PE F + +  E+IH+RWAMLGA G + PE   + G   G E
Subjt:  AKPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPE

Query:  AVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIA-EVVLVGGAEYYRII-NGL--NFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLG
        AVWFK G+ +     L+Y GN   +    I+A+ A +V+L+G  E YR+  NG     ED L+PGG FDPLGLA DP+  A LKVKE+KNGRLAMF+M G
Subjt:  AVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIA-EVVLVGGAEYYRII-NGL--NFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLG

Query:  FYFQAYVTGEGPVENLAKHLSDPFGNN
        F+ QA VTG+GP+ENLA HL+DP  NN
Subjt:  FYFQAYVTGEGPVENLAKHLSDPFGNN

AT2G34420.1 photosystem II light harvesting complex gene B1B21.7e-5350.22Show/hide
Query:  AKPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPE
        AKPK  + SP       WYG DR  +L        E P YL GE PGDYG+D  GLS  PE F + +  E+IH+RWAMLGA G + PE   + G   G E
Subjt:  AKPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPE

Query:  AVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIA-EVVLVGGAEYYRIING---LNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLG
        AVWFK G+ +     L+Y GN   +    I+A+ A +V+L+G  E YR+         ED L+PGG FDPLGLA DP+  A LKVKE+KNGRLAMF+M G
Subjt:  AVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIA-EVVLVGGAEYYRIING---LNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLG

Query:  FYFQAYVTGEGPVENLAKHLSDPFGNN
        F+ QA VTG+GP+ENLA HL+DP  NN
Subjt:  FYFQAYVTGEGPVENLAKHLSDPFGNN

AT4G10340.1 light harvesting complex of photosystem II 52.8e-13684.34Show/hide
Query:  ASLGVSEMLRNPLSF---SSRSAPSPSTPATFKTVALFGKKPAAPAKPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFG
        ASLGVSEML  PL+F   S  SAP  S+P+TFKTVALF KK  APAK K  A S  +DELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV GDYGYDPFG
Subjt:  ASLGVSEMLRNPLSF---SSRSAPSPSTPATFKTVALFGKKPAAPAKPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFG

Query:  LSKKPEDFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRIINGLNFEDK
        L KKPE+F KYQAFELIHARWAMLGAAGFIIPEA NK+GANCGPEAVWFKTGALLLDGNTLNYFG NIPINL++AV+AEVVL+GGAEYYRI NGL+FEDK
Subjt:  LSKKPEDFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRIINGLNFEDK

Query:  LHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
        LHPGGPFDPLGLA DP+Q A+LKVKEIKNGRLAMFAMLGF+ QAYVTGEGPVENLAKHLSDPFGNNLLTVI+G AER PTL
Subjt:  LHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTTTGGCTGCTTCCACCGCCGCCGCCTCCCTCGGCGTCTCTGAAATGCTAAGAAACCCTCTTAGCTTCTCCTCCAGATCCGCTCCCTCCCCTTCTACCCCCGC
CACCTTCAAAACCGTTGCGCTTTTCGGGAAGAAGCCCGCAGCACCTGCCAAGCCAAAGCCCTCTGCTGCCTCTCCCGTCAACGACGAGCTCGCCAAGTGGTATGGGCCGG
ATAGAAGGATTTTCTTGCCAGATGGTTTGTTGGACCGATCCGAGATCCCCGAGTACTTGAACGGAGAAGTCCCCGGCGACTATGGTTATGACCCCTTTGGACTCAGCAAG
AAGCCCGAAGACTTCACCAAATACCAAGCATTTGAATTGATTCATGCAAGATGGGCTATGCTTGGAGCTGCTGGTTTCATCATCCCTGAGGCCTTCAACAAATTCGGCGC
TAACTGTGGCCCCGAAGCTGTCTGGTTCAAGACCGGAGCTCTACTTCTTGATGGAAACACATTGAATTACTTTGGAAACAACATTCCCATCAACCTCATCGTCGCCGTCA
TTGCTGAGGTTGTTCTTGTTGGTGGCGCTGAATACTACAGAATCATCAACGGCTTGAACTTTGAGGACAAGCTTCACCCAGGAGGGCCATTCGACCCATTGGGGTTAGCA
GACGACCCAGACCAGGCAGCAATCTTGAAGGTGAAAGAGATCAAGAATGGAAGATTGGCAATGTTTGCAATGCTAGGGTTTTACTTCCAAGCATATGTGACAGGAGAAGG
GCCAGTGGAGAATTTGGCAAAGCATTTGAGTGATCCTTTTGGAAACAATTTGCTCACAGTCATTTCAGGGAATGCTGAAAGAGTTCCAACTCTTTAA
mRNA sequenceShow/hide mRNA sequence
CACCAGCACCAACCATATAGCTTCTTCCTTCTCCTCATCTCTTCTTCACCATTTACACATTCTTCATTCTTCTTTCTTCTTTCCTCCCTTCAATCCCCCCCACCATGGCT
TCTTTGGCTGCTTCCACCGCCGCCGCCTCCCTCGGCGTCTCTGAAATGCTAAGAAACCCTCTTAGCTTCTCCTCCAGATCCGCTCCCTCCCCTTCTACCCCCGCCACCTT
CAAAACCGTTGCGCTTTTCGGGAAGAAGCCCGCAGCACCTGCCAAGCCAAAGCCCTCTGCTGCCTCTCCCGTCAACGACGAGCTCGCCAAGTGGTATGGGCCGGATAGAA
GGATTTTCTTGCCAGATGGTTTGTTGGACCGATCCGAGATCCCCGAGTACTTGAACGGAGAAGTCCCCGGCGACTATGGTTATGACCCCTTTGGACTCAGCAAGAAGCCC
GAAGACTTCACCAAATACCAAGCATTTGAATTGATTCATGCAAGATGGGCTATGCTTGGAGCTGCTGGTTTCATCATCCCTGAGGCCTTCAACAAATTCGGCGCTAACTG
TGGCCCCGAAGCTGTCTGGTTCAAGACCGGAGCTCTACTTCTTGATGGAAACACATTGAATTACTTTGGAAACAACATTCCCATCAACCTCATCGTCGCCGTCATTGCTG
AGGTTGTTCTTGTTGGTGGCGCTGAATACTACAGAATCATCAACGGCTTGAACTTTGAGGACAAGCTTCACCCAGGAGGGCCATTCGACCCATTGGGGTTAGCAGACGAC
CCAGACCAGGCAGCAATCTTGAAGGTGAAAGAGATCAAGAATGGAAGATTGGCAATGTTTGCAATGCTAGGGTTTTACTTCCAAGCATATGTGACAGGAGAAGGGCCAGT
GGAGAATTTGGCAAAGCATTTGAGTGATCCTTTTGGAAACAATTTGCTCACAGTCATTTCAGGGAATGCTGAAAGAGTTCCAACTCTTTAAATCAATGAATGAATGAATC
AATCAATGCCATTCATTTTAAAACCCACAACCCAATCACAAGTTTGTGTATTGAAGGATGAAAAATTCTTGAATGCTTTTGTAAATTGGTATTGAGACTATTTTGTAGCC
CCTGACTACTCAACTCTTGCATTTGAAAGAGATATGAAACAAGGAGTTAAGATCAAATTTTTCTATCAATTATTGTGACTTGAGTATAGTATCTATCCACACTGATTACC
AGCA
Protein sequenceShow/hide protein sequence
MASLAASTAAASLGVSEMLRNPLSFSSRSAPSPSTPATFKTVALFGKKPAAPAKPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSK
KPEDFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLA
DDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL