; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI05G30320 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G30320
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRNA-binding protein 24 isoform X1
Genome locationChr5:28294904..28298283
RNA-Seq ExpressionCSPI05G30320
SyntenyCSPI05G30320
Gene Ontology termsGO:0030154 - cell differentiation (biological process)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily
IPR037366 - BOULE/DAZ family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039354.1 RNA-binding protein 24 [Cucumis melo var. makuwa]2.4e-15095.44Show/hide
Query:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKP
        MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKP
Subjt:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKP

Query:  STPKHEKKKWELTGGGGGRNNFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGILS
        STPKHEKKKWELTGGGGGRNNFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYG             YYNVYGGATAQYPMYGTGPGGILS
Subjt:  STPKHEKKKWELTGGGGGRNNFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGILS

Query:  GAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR
        GAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR
Subjt:  GAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR

XP_011656046.1 RNA-binding protein 24 isoform X1 [Cucumis sativus]4.0e-161100Show/hide
Query:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKP
        MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKP
Subjt:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKP

Query:  STPKHEKKKWELTGGGGGRNNFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGILS
        STPKHEKKKWELTGGGGGRNNFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGILS
Subjt:  STPKHEKKKWELTGGGGGRNNFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGILS

Query:  GAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR
        GAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR
Subjt:  GAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR

XP_016902397.1 PREDICTED: RNA-binding protein 24 isoform X2 [Cucumis melo]1.8e-15398.57Show/hide
Query:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKP
        MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKP
Subjt:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKP

Query:  STPKHEKKKWELTGGGGGRNNFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGILS
        STPKHEKKKWELTGGGGGRNNFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGILS
Subjt:  STPKHEKKKWELTGGGGGRNNFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGILS

Query:  GAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALP
        GAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLPPTPPTLPS V  A+P
Subjt:  GAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALP

XP_016902398.1 PREDICTED: RNA-binding protein 24 isoform X3 [Cucumis melo]1.1e-15397.19Show/hide
Query:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKP
        MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKP
Subjt:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKP

Query:  STPKHEKKKWELTGGGGGRNNFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGILS
        STPKH        GGGGGRNNFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGILS
Subjt:  STPKHEKKKWELTGGGGGRNNFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGILS

Query:  GAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR
        GAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR
Subjt:  GAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR

XP_038890037.1 RNA-binding protein 24 isoform X1 [Benincasa hispida]4.4e-15294.83Show/hide
Query:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKP
        MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDA+PVIDGRRANCNLASLGVQRSKP
Subjt:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKP

Query:  STPKHEKKKWELTGGGG-----GRNNFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGP
        STPKHEKKKWELTGGGG     G  NFRVLSSNFQ+GFGGNVGSAFHSP TTFPHYAI QGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGP
Subjt:  STPKHEKKKWELTGGGG-----GRNNFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGP

Query:  GGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR
        GGILSGAAAAAAAFYPYFQFGEGSGGGGSGQ GYGVQYPHHLFQYS AINS+AATTF QHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR
Subjt:  GGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR

TrEMBL top hitse value%identityAlignment
A0A0A0KUN6 RRM domain-containing protein8.7e-15498.57Show/hide
Query:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKP
        MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKP
Subjt:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKP

Query:  STPKHEKKKWELTGGGGGRNNFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGILS
        STPKHEKKKWELTGGGGGRNNFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGILS
Subjt:  STPKHEKKKWELTGGGGGRNNFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGILS

Query:  GAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALP
        GAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLPPTPPTLPS V  A+P
Subjt:  GAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALP

A0A1S4E2E1 RNA-binding protein 24 isoform X11.9e-161100Show/hide
Query:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKP
        MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKP
Subjt:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKP

Query:  STPKHEKKKWELTGGGGGRNNFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGILS
        STPKHEKKKWELTGGGGGRNNFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGILS
Subjt:  STPKHEKKKWELTGGGGGRNNFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGILS

Query:  GAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR
        GAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR
Subjt:  GAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR

A0A1S4E2E6 RNA-binding protein 24 isoform X28.7e-15498.57Show/hide
Query:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKP
        MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKP
Subjt:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKP

Query:  STPKHEKKKWELTGGGGGRNNFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGILS
        STPKHEKKKWELTGGGGGRNNFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGILS
Subjt:  STPKHEKKKWELTGGGGGRNNFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGILS

Query:  GAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALP
        GAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLPPTPPTLPS V  A+P
Subjt:  GAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALP

A0A1S4E2E8 RNA-binding protein 24 isoform X35.1e-15497.19Show/hide
Query:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKP
        MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKP
Subjt:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKP

Query:  STPKHEKKKWELTGGGGGRNNFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGILS
        STPKH        GGGGGRNNFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGILS
Subjt:  STPKHEKKKWELTGGGGGRNNFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGILS

Query:  GAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR
        GAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR
Subjt:  GAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR

A0A5A7T7A3 RNA-binding protein 241.2e-15095.44Show/hide
Query:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKP
        MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKP
Subjt:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKP

Query:  STPKHEKKKWELTGGGGGRNNFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGILS
        STPKHEKKKWELTGGGGGRNNFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYG             YYNVYGGATAQYPMYGTGPGGILS
Subjt:  STPKHEKKKWELTGGGGGRNNFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGILS

Query:  GAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR
        GAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR
Subjt:  GAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR

SwissProt top hitse value%identityAlignment
D3Z4I3 RNA-binding protein 243.7e-2438.02Show/hide
Query:  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWE
        DTTYTK+FVGGL + T   +++KYFE FGDI EAVVITD+ TG+S+GYGFVT  +  AA RAC D +P+IDGR+AN NLA LG   +KP           
Subjt:  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWE

Query:  LTGGGGGRNNFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGI--PYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGILSGAAAAAAAF
                   R++   F  G      +    P     HY   Q    P  +  +   +      T Y +  G A AQY           + AAAAAAA+
Subjt:  LTGGGGGRNNFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGI--PYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGILSGAAAAAAAF

Query:  --YPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINSTAA
          YPY      +G   +G   Y VQ P      +AA   TAA
Subjt:  --YPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINSTAA

Q6GQD3 RNA-binding protein 24-A1.8e-2336.48Show/hide
Query:  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWE
        DTTYTK+FVGGL + T   +++KYFE FGDI EAVVITD+ TG+S+GYGFVT  +  AA RAC D +P+IDGR+AN NLA LG   +KP           
Subjt:  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWE

Query:  LTGGGGGRNNFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGILSGAAAAAAAFYP
                   R++   F  G      +    P     HY   Q             P     TS Y  Y   +A Y  Y          AAAAAAA+  
Subjt:  LTGGGGGRNNFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGILSGAAAAAAAFYP

Query:  YFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQH
        Y      +  G     GYG   P  L   +    + AA  F Q+
Subjt:  YFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQH

Q76LC6 RNA-binding protein 246.2e-2436.84Show/hide
Query:  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWE
        DTTYTK+FVGGL + T   +++KYFE FG+I EAVVITD+ TG+S+GYGFVT  +  AA RAC D +P+IDGR+AN NLA LG   +KP           
Subjt:  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWE

Query:  LTGGGGGRNNFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTS---YYNVYGGATAQYPMYGTGPGGILSGAAAAAAA
                   RV+   F  G      +    P     HY   Q             P  T  T+   Y +  G A AQY    T        AAAAA  
Subjt:  LTGGGGGRNNFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTS---YYNVYGGATAQYPMYGTGPGGILSGAAAAAAA

Query:  FYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQH
         YPY      +G   +   GY +Q P  L   +    + AA  F Q+
Subjt:  FYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQH

Q9BX46 RNA-binding protein 242.1e-2438.02Show/hide
Query:  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWE
        DTTYTK+FVGGL + T   +++KYFE FG+I EAVVITD+ TG+S+GYGFVT  +  AA RAC D +P+IDGR+AN NLA LG   +KP           
Subjt:  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWE

Query:  LTGGGGGRNNFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGI--PYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGILSGAAAAAAAF
                   R++   F  G      +    P     HY   Q    P  +  +   +      T Y +  G A AQY           + AAAAAAA+
Subjt:  LTGGGGGRNNFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGI--PYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGILSGAAAAAAAF

Query:  --YPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINSTAA
          YPY      +G   +G  GY VQ P      +AA   TAA
Subjt:  --YPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINSTAA

Q9M1S3 Probable RNA-binding protein ARP12.1e-2737.27Show/hide
Query:  TPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPS
        T +N+   FGDT  TKVFVGGLAW+THK+ M  +F ++GDILEAV+I+DK T RSKGYGFVTF++  AA RAC D++P+I+GRRANCNLASLG +  K  
Subjt:  TPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPS

Query:  TPKHEKKKWELTGGGGGRNNFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQ--QGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGIL
        T    ++        G +N  R    +      GN    ++    T   +  Q  Q +P+  YGY S    Y  P   +N   G      M G       
Subjt:  TPKHEKKKWELTGGGGGRNNFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQ--QGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGIL

Query:  SGAAAAAAAFYPYFQFGEG--SGGGGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLPPTPP
           +     +Y +  +G G    G  S    +   YP+H  Q         A  FPQ   + P+S   TPP
Subjt:  SGAAAAAAAFYPYFQFGEG--SGGGGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLPPTPP

Arabidopsis top hitse value%identityAlignment
AT1G22910.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.7e-6254.41Show/hide
Query:  GDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKW
        GDTTYTKVFVGGLAWETHK+TMKK+FEQFG+ILEAVVITDKA+GRSKGYGFVTFRE +AA  ACVDA+PVIDGRRANCNLASLG+QRSKPSTP H     
Subjt:  GDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKW

Query:  ELTGGGGGRNNFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYGYSSYSPDY-TYPTSYYNVYGGAT-AQYPMYG--TGPGGILSGAAAAA
           GGGG  NN RV+ S  Q+GF    G        TF HY     +P NL+GYS YSPDY ++PT+ Y +YG  +  QY +YG     GG L+ AAA+A
Subjt:  ELTGGGGGRNNFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYGYSSYSPDY-TYPTSYYNVYGGAT-AQYPMYG--TGPGGILSGAAAAA

Query:  AAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSL-------PPTPPTLP
          FYP        GG G  Q      + HHL  Y+           P HY+ P  S+       P  PP +P
Subjt:  AAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSL-------PPTPPTLP

AT1G22910.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.2e-6256.03Show/hide
Query:  GDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKW
        GDTTYTKVFVGGLAWETHK+TMKK+FEQFG+ILEAVVITDKA+GRSKGYGFVTFRE +AA  ACVDA+PVIDGRRANCNLASLG+QRSKPSTP H     
Subjt:  GDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKW

Query:  ELTGGGGGRNNFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYGYSSYSPDY-TYPTSYYNVYGGAT-AQYPMYG--TGPGGILSGAAAAA
           GGGG  NN RV+ S  Q+GF    G        TF HY     +P NL+GYS YSPDY ++PT+ Y +YG  +  QY +YG     GG L+ AAA+A
Subjt:  ELTGGGGGRNNFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYGYSSYSPDY-TYPTSYYNVYGGAT-AQYPMYG--TGPGGILSGAAAAA

Query:  AAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSL
          FYP        GG G  Q      + HHL  Y+           P HY+ P  S+
Subjt:  AAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSL

AT1G22910.3 RNA-binding (RRM/RBD/RNP motifs) family protein2.2e-6153.26Show/hide
Query:  GDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKW
        GDTTYTKVFVGGLAWETHK+TMKK+FEQFG+ILEAVVITDKA+GRSKGYGFVTFRE +AA  ACVDA+PVIDGRRANCNLASLG+QRSKPSTP H     
Subjt:  GDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKW

Query:  ELTGGGGGRNNFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYGYSSYSPDY-TYPTSYYNVYGGAT-AQYPMYG--TGPGGILSGAAAAA
           GGGG  NN RV+ S  Q+GF    G        TF HY     +P NL+GYS YSPDY ++PT+ Y +YG  +  QY +YG     GG L+ AAA+A
Subjt:  ELTGGGGGRNNFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYGYSSYSPDY-TYPTSYYNVYGGAT-AQYPMYG--TGPGGILSGAAAAA

Query:  AAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPI
          FYP        GG G  Q      + HHL  Y+           P HY+ P  S+        S  T +   P+
Subjt:  AAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPI

AT1G33470.1 RNA-binding (RRM/RBD/RNP motifs) family protein4.4e-6556.83Show/hide
Query:  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWE
        DTT+TKVFVGGLAWETHK +++ YFEQFGDI+EAVVITDK++GRSKGYGFVTF +P+AA +ACVD +PVIDGRRANCNLA+ GVQRSKPS+P H      
Subjt:  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWE

Query:  LTGGGGGRNNFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPY-NLYGYSSYSPDYTYPT-SYYNVYGGATAQYPMYGTGPGGILSGAAAAAAAF
          G  GGR     ++S F++ F G   +A  SP   F HY     +PY N +G+SSYS DY YPT SYYNVYGGATAQ+PMYG+GP  +   AAA AA F
Subjt:  LTGGGGGRNNFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPY-NLYGYSSYSPDYTYPT-SYYNVYGGATAQYPMYGTGPGGILSGAAAAAAAF

Query:  YPYFQFGEGSGGGGSGQQGYG-VQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALP
        YPY QF EG+G       GY  + YP+H+F YSA         +P H+   P+SL P+ P +PS V  A+P
Subjt:  YPYFQFGEGSGGGGSGQQGYG-VQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALP

AT1G33470.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.8e-6657.04Show/hide
Query:  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWE
        DTT+TKVFVGGLAWETHK +++ YFEQFGDI+EAVVITDK++GRSKGYGFVTF +P+AA +ACVD +PVIDGRRANCNLA+ GVQRSKPS+P H      
Subjt:  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWE

Query:  LTGGGGGRNNFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPY-NLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGILSGAAAAAAAFY
          G  GGR     ++S F++ F G   +A  SP   F HY     +PY N +G+SSYS DY YPTSYYNVYGGATAQ+PMYG+GP  +   AAA AA FY
Subjt:  LTGGGGGRNNFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPY-NLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGILSGAAAAAAAFY

Query:  PYFQFGEGSGGGGSGQQGYG-VQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALP
        PY QF EG+G       GY  + YP+H+F YSA         +P H+   P+SL P+ P +PS V  A+P
Subjt:  PYFQFGEGSGGGGSGQQGYG-VQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCCATCTAACTTAGCAAGTCAATTTGGAGATACCACTTATACCAAAGTTTTCGTGGGTGGTTTGGCTTGGGAAACTCACAAAGACACCATGAAAAAATACTTCGA
ACAATTTGGTGATATCTTGGAAGCCGTCGTTATTACCGACAAAGCCACTGGCCGATCCAAAGGCTATGGATTTGTCACGTTTCGTGAACCCGATGCTGCCATGAGAGCTT
GTGTAGATGCTTCTCCAGTTATCGACGGTCGGAGAGCCAATTGTAATCTTGCTTCTCTTGGTGTTCAAAGATCCAAACCCTCCACGCCTAAACACGAGAAAAAGAAATGG
GAATTGACAGGAGGAGGAGGAGGAAGAAATAATTTTAGGGTATTAAGCTCAAATTTCCAGAGTGGATTTGGAGGGAATGTTGGATCAGCTTTTCATTCACCAACTACAAC
TTTCCCTCATTATGCCATCCAGCAAGGGATCCCTTACAATCTCTATGGGTACTCTTCTTATTCGCCAGACTACACTTACCCTACGAGCTATTACAATGTGTACGGCGGGG
CAACTGCACAGTACCCCATGTACGGGACGGGTCCGGGTGGCATATTGAGCGGAGCAGCAGCGGCAGCGGCGGCATTCTACCCGTATTTCCAATTCGGGGAAGGAAGCGGT
GGCGGCGGTTCCGGGCAGCAAGGGTATGGGGTTCAGTATCCTCATCATCTGTTTCAATACTCGGCCGCGATTAATTCAACTGCTGCAACAACTTTCCCTCAGCATTATGC
TGCTCCTCCTATGTCTCTTCCTCCCACGCCCCCCACTTTGCCATCAGGCGTGACCATGGCTCTTCCTGCACCAATTCCACATCGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACTCCATCTAACTTAGCAAGTCAATTTGGAGATACCACTTATACCAAAGTTTTCGTGGGTGGTTTGGCTTGGGAAACTCACAAAGACACCATGAAAAAATACTTCGA
ACAATTTGGTGATATCTTGGAAGCCGTCGTTATTACCGACAAAGCCACTGGCCGATCCAAAGGCTATGGATTTGTCACGTTTCGTGAACCCGATGCTGCCATGAGAGCTT
GTGTAGATGCTTCTCCAGTTATCGACGGTCGGAGAGCCAATTGTAATCTTGCTTCTCTTGGTGTTCAAAGATCCAAACCCTCCACGCCTAAACACGAGAAAAAGAAATGG
GAATTGACAGGAGGAGGAGGAGGAAGAAATAATTTTAGGGTATTAAGCTCAAATTTCCAGAGTGGATTTGGAGGGAATGTTGGATCAGCTTTTCATTCACCAACTACAAC
TTTCCCTCATTATGCCATCCAGCAAGGGATCCCTTACAATCTCTATGGGTACTCTTCTTATTCGCCAGACTACACTTACCCTACGAGCTATTACAATGTGTACGGCGGGG
CAACTGCACAGTACCCCATGTACGGGACGGGTCCGGGTGGCATATTGAGCGGAGCAGCAGCGGCAGCGGCGGCATTCTACCCGTATTTCCAATTCGGGGAAGGAAGCGGT
GGCGGCGGTTCCGGGCAGCAAGGGTATGGGGTTCAGTATCCTCATCATCTGTTTCAATACTCGGCCGCGATTAATTCAACTGCTGCAACAACTTTCCCTCAGCATTATGC
TGCTCCTCCTATGTCTCTTCCTCCCACGCCCCCCACTTTGCCATCAGGCGTGACCATGGCTCTTCCTGCACCAATTCCACATCGTTAGAGACAACATAATCTCATCGTCG
ACCTCAAAGTCCCTCCAATTTGTCTTCTTCAATCAAAACCAACTCAACCTTCGCCCTAACCATGGTTCAATCTCTTTTCTCTCTTCACTCTAACTCACTCATGCCTTTTA
CAGGCCAATCCTAGCCCCCCATAGGGGCTAACCTCAAGACCAACCATACCAATTCTCACCCTCTCCAAAATTGGAGCAAAATCATGCATTTCCATTATTATTCATATTAA
TTAGGGTTTAGTGAAGAAAAACAAAAGTGAAAATGGTTCCTTTTATCAAGAGAACCAAAACCCACTTTGTGAAAAATCCCAATTTAGGCCATCAAGGGAATTGGCCTCAA
ATTGGTAATATTTGCACATAGCTTTGTTTTTTTGTTGATCTTCAAAGCCTAGGAAAGGCTTTAAAGATTTAACCCAAAAAAAAAAAAA
Protein sequenceShow/hide protein sequence
MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKW
ELTGGGGGRNNFRVLSSNFQSGFGGNVGSAFHSPTTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSG
GGGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR