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CSPI05G30580 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G30580
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionPrv splice variant B
Genome locationChr5:28439043..28439348
RNA-Seq ExpressionCSPI05G30580
SyntenyCSPI05G30580
Gene Ontology termsNA
InterPro domainsIPR035897 - Toll/interleukin-1 receptor homology (TIR) domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AAU04758.1 MRGH10 [Cucumis melo]7.4e-0949.35Show/hide
Query:  AGSSSHASHLPFNVFIGFNRHEEDNKYKSSTRDLYKILCIQGMKVFMDDDGGGGGGSKKKVLMDEDNVSDKIVKAIE
        AGSSSH S + F+ F+ FNR EED+ Y+   + LY+ L   G+K+FMDD        KK    DE N+SD IVKAIE
Subjt:  AGSSSHASHLPFNVFIGFNRHEEDNKYKSSTRDLYKILCIQGMKVFMDDDGGGGGGSKKKVLMDEDNVSDKIVKAIE

KAA0039329.1 TMV resistance protein N-like [Cucumis melo var. makuwa]4.2e-1251.19Show/hide
Query:  LAGSSSHASHLPFNVFIGFNRHE-----EDNKYKSSTRDLYKILCIQGMKVFMDDDGGGGGGSKKKVLMD-EDNVSDKIVKAIE
        +A SS+H SH+ ++ FI FNR +     +   Y+  T+ LY+ LC  GMKVFM DDGGG  G  KKV  D E N++DKIVKAIE
Subjt:  LAGSSSHASHLPFNVFIGFNRHE-----EDNKYKSSTRDLYKILCIQGMKVFMDDDGGGGGGSKKKVLMD-EDNVSDKIVKAIE

KGN52630.1 hypothetical protein Csa_008636 [Cucumis sativus]2.1e-5199.02Show/hide
Query:  MVLAGSSSHASHLPFNVFIGFNRHEEDNKYKSSTRDLYKILCIQGMKVFMDDDGGGGGGSKKKVLMDEDNVSDKIVKAIETYRYNWLYTYQNTLSRITPP
        MVLAGSSSHASHLPFNVFIGFNRHEEDNKYKSSTRDLYKILCIQGMKVFMDDDGGGGGGSKKKVLMDEDNVSDKIVKAIETYRYNWLYTYQNT SRITPP
Subjt:  MVLAGSSSHASHLPFNVFIGFNRHEEDNKYKSSTRDLYKILCIQGMKVFMDDDGGGGGGSKKKVLMDEDNVSDKIVKAIETYRYNWLYTYQNTLSRITPP

Query:  KT
        KT
Subjt:  KT

XP_016902418.1 PREDICTED: TMV resistance protein N-like [Cucumis melo]7.4e-0949.35Show/hide
Query:  AGSSSHASHLPFNVFIGFNRHEEDNKYKSSTRDLYKILCIQGMKVFMDDDGGGGGGSKKKVLMDEDNVSDKIVKAIE
        AGSSSH S + F+ F+ FNR EED+ Y+   + LY+ L   G+K+FMDD        KK    DE N+SD IVKAIE
Subjt:  AGSSSHASHLPFNVFIGFNRHEEDNKYKSSTRDLYKILCIQGMKVFMDDDGGGGGGSKKKVLMDEDNVSDKIVKAIE

XP_038890436.1 LOW QUALITY PROTEIN: TMV resistance protein N-like [Benincasa hispida]1.3e-0853.16Show/hide
Query:  LAGSSSH-ASHLPFNVFIGFNRHEEDNKYKSSTRDLYKILCIQGMKVFMDDDGGGGGGSKKKVLMDEDNVSDKIVKAIE
        +AGSSS+  S + F+VFI FNR EED  Y+   ++LY+ L   GMKVFMDDD             DED VSDKIVKAIE
Subjt:  LAGSSSH-ASHLPFNVFIGFNRHEEDNKYKSSTRDLYKILCIQGMKVFMDDDGGGGGGSKKKVLMDEDNVSDKIVKAIE

TrEMBL top hitse value%identityAlignment
A0A0A0KSQ6 Uncharacterized protein9.9e-5299.02Show/hide
Query:  MVLAGSSSHASHLPFNVFIGFNRHEEDNKYKSSTRDLYKILCIQGMKVFMDDDGGGGGGSKKKVLMDEDNVSDKIVKAIETYRYNWLYTYQNTLSRITPP
        MVLAGSSSHASHLPFNVFIGFNRHEEDNKYKSSTRDLYKILCIQGMKVFMDDDGGGGGGSKKKVLMDEDNVSDKIVKAIETYRYNWLYTYQNT SRITPP
Subjt:  MVLAGSSSHASHLPFNVFIGFNRHEEDNKYKSSTRDLYKILCIQGMKVFMDDDGGGGGGSKKKVLMDEDNVSDKIVKAIETYRYNWLYTYQNTLSRITPP

Query:  KT
        KT
Subjt:  KT

A0A1S4E2G9 TMV resistance protein N-like3.6e-0949.35Show/hide
Query:  AGSSSHASHLPFNVFIGFNRHEEDNKYKSSTRDLYKILCIQGMKVFMDDDGGGGGGSKKKVLMDEDNVSDKIVKAIE
        AGSSSH S + F+ F+ FNR EED+ Y+   + LY+ L   G+K+FMDD        KK    DE N+SD IVKAIE
Subjt:  AGSSSHASHLPFNVFIGFNRHEEDNKYKSSTRDLYKILCIQGMKVFMDDDGGGGGGSKKKVLMDEDNVSDKIVKAIE

A0A5A7TDI7 TMV resistance protein N-like2.0e-1251.19Show/hide
Query:  LAGSSSHASHLPFNVFIGFNRHE-----EDNKYKSSTRDLYKILCIQGMKVFMDDDGGGGGGSKKKVLMD-EDNVSDKIVKAIE
        +A SS+H SH+ ++ FI FNR +     +   Y+  T+ LY+ LC  GMKVFM DDGGG  G  KKV  D E N++DKIVKAIE
Subjt:  LAGSSSHASHLPFNVFIGFNRHE-----EDNKYKSSTRDLYKILCIQGMKVFMDDDGGGGGGSKKKVLMD-EDNVSDKIVKAIE

M4QW81 Resistance gene-like protein1.4e-0847.06Show/hide
Query:  AGSSSHASHLPFNVFIGFNRHEEDNKYKSSTRDLYKILCIQGMKVFMDDDGGG--------GGGSKKKVLMDEDNVSDKIVKAIE
        AGSSSH S + F+VF+ FNR EED+ Y+   + LY+ L   G+K+FMDDD               KK  + DE N+SD IVKAIE
Subjt:  AGSSSHASHLPFNVFIGFNRHEEDNKYKSSTRDLYKILCIQGMKVFMDDDGGG--------GGGSKKKVLMDEDNVSDKIVKAIE

Q5DMW3 MRGH103.6e-0949.35Show/hide
Query:  AGSSSHASHLPFNVFIGFNRHEEDNKYKSSTRDLYKILCIQGMKVFMDDDGGGGGGSKKKVLMDEDNVSDKIVKAIE
        AGSSSH S + F+ F+ FNR EED+ Y+   + LY+ L   G+K+FMDD        KK    DE N+SD IVKAIE
Subjt:  AGSSSHASHLPFNVFIGFNRHEEDNKYKSSTRDLYKILCIQGMKVFMDDDGGGGGGSKKKVLMDEDNVSDKIVKAIE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTTGGCTGGTTCATCATCTCATGCATCTCATTTGCCTTTTAATGTTTTCATAGGTTTCAACAGACATGAGGAAGACAACAAATACAAAAGTTCTACGAGGGATTT
ATATAAGATTTTGTGTATCCAGGGAATGAAGGTGTTTATGGATGATGATGGTGGTGGTGGTGGTGGTAGTAAGAAGAAGGTGTTAATGGATGAAGATAATGTGAGCGATA
AGATTGTGAAAGCAATTGAAACTTACAGGTATAATTGGTTATATACATATCAAAACACCCTCTCCCGTATTACACCACCAAAAACT
mRNA sequenceShow/hide mRNA sequence
ATGGTTTTGGCTGGTTCATCATCTCATGCATCTCATTTGCCTTTTAATGTTTTCATAGGTTTCAACAGACATGAGGAAGACAACAAATACAAAAGTTCTACGAGGGATTT
ATATAAGATTTTGTGTATCCAGGGAATGAAGGTGTTTATGGATGATGATGGTGGTGGTGGTGGTGGTAGTAAGAAGAAGGTGTTAATGGATGAAGATAATGTGAGCGATA
AGATTGTGAAAGCAATTGAAACTTACAGGTATAATTGGTTATATACATATCAAAACACCCTCTCCCGTATTACACCACCAAAAACT
Protein sequenceShow/hide protein sequence
MVLAGSSSHASHLPFNVFIGFNRHEEDNKYKSSTRDLYKILCIQGMKVFMDDDGGGGGGSKKKVLMDEDNVSDKIVKAIETYRYNWLYTYQNTLSRITPPKT