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CSPI05G31000 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G31000
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplastic
Genome locationChr5:28724930..28726156
RNA-Seq ExpressionCSPI05G31000
SyntenyCSPI05G31000
Gene Ontology termsGO:0000105 - histidine biosynthetic process (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0003949 - 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604348.1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, partial [Cucurbita argyrosperma subsp. sororia]3.4e-2176.62Show/hide
Query:  PFTACKARNQFYKFEMKFQSFCSTRSSSLCACFGASSSSNFGAMKLGIIGVTTSLSSKSSRMTVCAVSFRPCIDIHQ
        P T  KA NQ +  EMKFQS CSTRSSSLCA  G SSSSN+GAMKLGII  TTSLS +SSRMTVCAVSFRPCIDIH+
Subjt:  PFTACKARNQFYKFEMKFQSFCSTRSSSLCACFGASSSSNFGAMKLGIIGVTTSLSSKSSRMTVCAVSFRPCIDIHQ

XP_004141550.1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplastic isoform X2 [Cucumis sativus]4.3e-24100Show/hide
Query:  MKFQSFCSTRSSSLCACFGASSSSNFGAMKLGIIGVTTSLSSKSSRMTVCAVSFRPCIDIHQ
        MKFQSFCSTRSSSLCACFGASSSSNFGAMKLGIIGVTTSLSSKSSRMTVCAVSFRPCIDIHQ
Subjt:  MKFQSFCSTRSSSLCACFGASSSSNFGAMKLGIIGVTTSLSSKSSRMTVCAVSFRPCIDIHQ

XP_011656091.1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplastic isoform X1 [Cucumis sativus]4.3e-24100Show/hide
Query:  MKFQSFCSTRSSSLCACFGASSSSNFGAMKLGIIGVTTSLSSKSSRMTVCAVSFRPCIDIHQ
        MKFQSFCSTRSSSLCACFGASSSSNFGAMKLGIIGVTTSLSSKSSRMTVCAVSFRPCIDIHQ
Subjt:  MKFQSFCSTRSSSLCACFGASSSSNFGAMKLGIIGVTTSLSSKSSRMTVCAVSFRPCIDIHQ

XP_031741685.1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplastic isoform X3 [Cucumis sativus]4.3e-24100Show/hide
Query:  MKFQSFCSTRSSSLCACFGASSSSNFGAMKLGIIGVTTSLSSKSSRMTVCAVSFRPCIDIHQ
        MKFQSFCSTRSSSLCACFGASSSSNFGAMKLGIIGVTTSLSSKSSRMTVCAVSFRPCIDIHQ
Subjt:  MKFQSFCSTRSSSLCACFGASSSSNFGAMKLGIIGVTTSLSSKSSRMTVCAVSFRPCIDIHQ

XP_031741687.1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplastic isoform X5 [Cucumis sativus]4.3e-24100Show/hide
Query:  MKFQSFCSTRSSSLCACFGASSSSNFGAMKLGIIGVTTSLSSKSSRMTVCAVSFRPCIDIHQ
        MKFQSFCSTRSSSLCACFGASSSSNFGAMKLGIIGVTTSLSSKSSRMTVCAVSFRPCIDIHQ
Subjt:  MKFQSFCSTRSSSLCACFGASSSSNFGAMKLGIIGVTTSLSSKSSRMTVCAVSFRPCIDIHQ

TrEMBL top hitse value%identityAlignment
A0A0A0KW55 Uncharacterized protein2.8e-3793.18Show/hide
Query:  MELILPFTACKARNQFYKFEMKFQSFCSTRSSSLCACFGASSSSNFGAMKLGIIGVTTSLSSKSSRMTVCAVSFRPCIDIHQVFDLLF
        MELILPFTACKARN+FYKFEMKFQSFCSTRSSSLCACFGASSSSNFGAMKLGIIGVTTSLSSKSSRMTVCAVSFRPCIDIHQ+  + F
Subjt:  MELILPFTACKARNQFYKFEMKFQSFCSTRSSSLCACFGASSSSNFGAMKLGIIGVTTSLSSKSSRMTVCAVSFRPCIDIHQVFDLLF

A0A1S3CAP5 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplastic8.3e-2191.94Show/hide
Query:  MKFQSFCSTRSSSLCACFGASSSSNFGAMKLGIIGVTTSLSSKSSRMTVCAVSFRPCIDIHQ
        M FQSFCST+SSSLCA  GASSSSNFGAMKLGIIGVTTSLSS+SSRMTVCAVSFRPCIDIHQ
Subjt:  MKFQSFCSTRSSSLCACFGASSSSNFGAMKLGIIGVTTSLSSKSSRMTVCAVSFRPCIDIHQ

A0A1S3CBT6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplastic8.3e-2191.94Show/hide
Query:  MKFQSFCSTRSSSLCACFGASSSSNFGAMKLGIIGVTTSLSSKSSRMTVCAVSFRPCIDIHQ
        M FQSFCST+SSSLCA  GASSSSNFGAMKLGIIGVTTSLSS+SSRMTVCAVSFRPCIDIHQ
Subjt:  MKFQSFCSTRSSSLCACFGASSSSNFGAMKLGIIGVTTSLSSKSSRMTVCAVSFRPCIDIHQ

A0A5D3BNB4 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplastic8.3e-2191.94Show/hide
Query:  MKFQSFCSTRSSSLCACFGASSSSNFGAMKLGIIGVTTSLSSKSSRMTVCAVSFRPCIDIHQ
        M FQSFCST+SSSLCA  GASSSSNFGAMKLGIIGVTTSLSS+SSRMTVCAVSFRPCIDIHQ
Subjt:  MKFQSFCSTRSSSLCACFGASSSSNFGAMKLGIIGVTTSLSSKSSRMTVCAVSFRPCIDIHQ

A0A6J1IV96 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplastic5.0e-1883.87Show/hide
Query:  MKFQSFCSTRSSSLCACFGASSSSNFGAMKLGIIGVTTSLSSKSSRMTVCAVSFRPCIDIHQ
        MKFQS CSTRSSSLCA  G SSSSN+GAMKLGII  TTSLS +SSRMTVCAVSFRPCIDIH+
Subjt:  MKFQSFCSTRSSSLCACFGASSSSNFGAMKLGIIGVTTSLSSKSSRMTVCAVSFRPCIDIHQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATTGATATTGCCCTTTACAGCTTGTAAGGCGAGAAATCAGTTTTATAAGTTTGAAATGAAGTTCCAAAGCTTTTGTTCTACAAGAAGTTCCAGTCTATGTGCATG
TTTTGGAGCTTCGAGCTCATCGAACTTTGGAGCTATGAAGCTTGGAATCATTGGAGTGACAACTTCACTATCTTCCAAATCCTCAAGAATGACTGTTTGTGCAGTTAGTT
TCCGCCCTTGTATTGATATACACCAGGTATTTGATCTTTTGTTTGGCTACATTCCTTGA
mRNA sequenceShow/hide mRNA sequence
TTTTGATGGAATTGATATTGCCCTTTACAGCTTGTAAGGCGAGAAATCAGTTTTATAAGTTTGAAATGAAGTTCCAAAGCTTTTGTTCTACAAGAAGTTCCAGTCTATGT
GCATGTTTTGGAGCTTCGAGCTCATCGAACTTTGGAGCTATGAAGCTTGGAATCATTGGAGTGACAACTTCACTATCTTCCAAATCCTCAAGAATGACTGTTTGTGCAGT
TAGTTTCCGCCCTTGTATTGATATACACCAGGTATTTGATCTTTTGTTTGGCTACATTCCTTGAC
Protein sequenceShow/hide protein sequence
MELILPFTACKARNQFYKFEMKFQSFCSTRSSSLCACFGASSSSNFGAMKLGIIGVTTSLSSKSSRMTVCAVSFRPCIDIHQVFDLLFGYIP