; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI05G31340 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI05G31340
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionregulator of nonsense transcripts UPF3-like
Genome locationChr5:28879371..28886182
RNA-Seq ExpressionCSPI05G31340
SyntenyCSPI05G31340
Gene Ontology termsGO:0000184 - nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (biological process)
GO:0045727 - positive regulation of translation (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR005120 - UPF3 domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily
IPR039722 - Nonsense-mediated mRNA decay protein 3


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004141560.1 regulator of nonsense transcripts UPF3 isoform X2 [Cucumis sativus]1.8e-27698.64Show/hide
Query:  MKDPLERTKVVIRHLPPSLSHSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
        MKDPLERTKVVIRHLPPSLSHSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
Subjt:  MKDPLERTKVVIRHLPPSLSHSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR

Query:  SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR
        SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR
Subjt:  SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR

Query:  GMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSAIGISDVGTADFGKKKILLLKGKERDISHVSDDMLQLQSATSSGNSPASASKHNHRREAGGG
        GMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSAIGISDVGTADFGKKKILLLKGKERDISH       LQSATSSGNSPASASKHNHRREAGGG
Subjt:  GMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSAIGISDVGTADFGKKKILLLKGKERDISHVSDDMLQLQSATSSGNSPASASKHNHRREAGGG

Query:  VIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPTNARSGSNDISSNEPNPSGSEGDGKRASDNKFSKKELHGLGSASEKQEKRIRNKDRPDRG
        VIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPTNARSGSNDISSNEPNPSGSEGDGKRASDNKFSKKELHGLGSASEKQEKRIRNKDRPDRG
Subjt:  VIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPTNARSGSNDISSNEPNPSGSEGDGKRASDNKFSKKELHGLGSASEKQEKRIRNKDRPDRG

Query:  VWAPRSRSDASVSQLEESSVPQSSHLLSDSVEAFRGEMKEDIHGSRTGDVTTIVSGRNSSVENGSVRHVGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGH
        VWAPRSRSDASVSQLEESSVPQSSHLLSDSVEAFRGEMKEDIHGSRTGDVTTIVSGRNSSVENGSVRHVGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGH
Subjt:  VWAPRSRSDASVSQLEESSVPQSSHLLSDSVEAFRGEMKEDIHGSRTGDVTTIVSGRNSSVENGSVRHVGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGH

Query:  EKQVWVQKSSSGS
        EKQVWVQKSSSGS
Subjt:  EKQVWVQKSSSGS

XP_008459659.1 PREDICTED: regulator of nonsense transcripts UPF3 isoform X1 [Cucumis melo]3.6e-27798.25Show/hide
Query:  MKDPLERTKVVIRHLPPSLSHSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
        MKDPLERTKVVIRHLPPSLSHSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
Subjt:  MKDPLERTKVVIRHLPPSLSHSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR

Query:  SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR
        SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR
Subjt:  SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR

Query:  GMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSAIGISDVGTADFGKKKILLLKGKERDISHVSDDMLQLQSATSSGNSPASASKHNHRREAGGG
        GMEKKKYILKDSVKNTNRRDKSNFILVPRR+DQSA SS IGISDVG ADFGKKKILLLKGKERDISHVSDDMLQLQSATSSGNSPASASKHNHRREAGG 
Subjt:  GMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSAIGISDVGTADFGKKKILLLKGKERDISHVSDDMLQLQSATSSGNSPASASKHNHRREAGGG

Query:  VIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPTNARSGSNDISSNEPNPSGSEGDGKRASDNKFSKKELHGLGSASEKQEKRIRNKDRPDRG
        VIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPTNARSGSNDISSNEPNPSGSEGDGKRA DNKFSKKELHGLGSASEKQEKRIRNKDRPDRG
Subjt:  VIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPTNARSGSNDISSNEPNPSGSEGDGKRASDNKFSKKELHGLGSASEKQEKRIRNKDRPDRG

Query:  VWAPRSRSDASVSQLEESSVPQSSHLLSDSVEAFRGEMKEDIHGSRTGDVTTIVSGRNSSVENGSVRHVGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGH
        VWAPRSRSDASVSQLEESSV QSSHLLSDSVEA+RGEMKEDIHGSRT DVTTIVSGRNSSVENGSVRHVGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGH
Subjt:  VWAPRSRSDASVSQLEESSVPQSSHLLSDSVEAFRGEMKEDIHGSRTGDVTTIVSGRNSSVENGSVRHVGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGH

Query:  EKQVWVQKSSSGS
        EKQVWVQKSSSGS
Subjt:  EKQVWVQKSSSGS

XP_008459660.1 PREDICTED: regulator of nonsense transcripts UPF3 isoform X2 [Cucumis melo]2.9e-27196.88Show/hide
Query:  MKDPLERTKVVIRHLPPSLSHSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
        MKDPLERTKVVIRHLPPSLSHSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
Subjt:  MKDPLERTKVVIRHLPPSLSHSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR

Query:  SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR
        SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR
Subjt:  SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR

Query:  GMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSAIGISDVGTADFGKKKILLLKGKERDISHVSDDMLQLQSATSSGNSPASASKHNHRREAGGG
        GMEKKKYILKDSVKNTNRRDKSNFILVPRR+DQSA SS IGISDVG ADFGKKKILLLKGKERDISH       LQSATSSGNSPASASKHNHRREAGG 
Subjt:  GMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSAIGISDVGTADFGKKKILLLKGKERDISHVSDDMLQLQSATSSGNSPASASKHNHRREAGGG

Query:  VIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPTNARSGSNDISSNEPNPSGSEGDGKRASDNKFSKKELHGLGSASEKQEKRIRNKDRPDRG
        VIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPTNARSGSNDISSNEPNPSGSEGDGKRA DNKFSKKELHGLGSASEKQEKRIRNKDRPDRG
Subjt:  VIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPTNARSGSNDISSNEPNPSGSEGDGKRASDNKFSKKELHGLGSASEKQEKRIRNKDRPDRG

Query:  VWAPRSRSDASVSQLEESSVPQSSHLLSDSVEAFRGEMKEDIHGSRTGDVTTIVSGRNSSVENGSVRHVGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGH
        VWAPRSRSDASVSQLEESSV QSSHLLSDSVEA+RGEMKEDIHGSRT DVTTIVSGRNSSVENGSVRHVGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGH
Subjt:  VWAPRSRSDASVSQLEESSVPQSSHLLSDSVEAFRGEMKEDIHGSRTGDVTTIVSGRNSSVENGSVRHVGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGH

Query:  EKQVWVQKSSSGS
        EKQVWVQKSSSGS
Subjt:  EKQVWVQKSSSGS

XP_011656113.1 regulator of nonsense transcripts UPF3 isoform X1 [Cucumis sativus]2.2e-282100Show/hide
Query:  MKDPLERTKVVIRHLPPSLSHSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
        MKDPLERTKVVIRHLPPSLSHSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
Subjt:  MKDPLERTKVVIRHLPPSLSHSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR

Query:  SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR
        SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR
Subjt:  SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR

Query:  GMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSAIGISDVGTADFGKKKILLLKGKERDISHVSDDMLQLQSATSSGNSPASASKHNHRREAGGG
        GMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSAIGISDVGTADFGKKKILLLKGKERDISHVSDDMLQLQSATSSGNSPASASKHNHRREAGGG
Subjt:  GMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSAIGISDVGTADFGKKKILLLKGKERDISHVSDDMLQLQSATSSGNSPASASKHNHRREAGGG

Query:  VIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPTNARSGSNDISSNEPNPSGSEGDGKRASDNKFSKKELHGLGSASEKQEKRIRNKDRPDRG
        VIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPTNARSGSNDISSNEPNPSGSEGDGKRASDNKFSKKELHGLGSASEKQEKRIRNKDRPDRG
Subjt:  VIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPTNARSGSNDISSNEPNPSGSEGDGKRASDNKFSKKELHGLGSASEKQEKRIRNKDRPDRG

Query:  VWAPRSRSDASVSQLEESSVPQSSHLLSDSVEAFRGEMKEDIHGSRTGDVTTIVSGRNSSVENGSVRHVGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGH
        VWAPRSRSDASVSQLEESSVPQSSHLLSDSVEAFRGEMKEDIHGSRTGDVTTIVSGRNSSVENGSVRHVGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGH
Subjt:  VWAPRSRSDASVSQLEESSVPQSSHLLSDSVEAFRGEMKEDIHGSRTGDVTTIVSGRNSSVENGSVRHVGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGH

Query:  EKQVWVQKSSSGS
        EKQVWVQKSSSGS
Subjt:  EKQVWVQKSSSGS

XP_038890175.1 regulator of nonsense transcripts UPF3 isoform X1 [Benincasa hispida]1.7e-26694.74Show/hide
Query:  MKDPLERTKVVIRHLPPSLSHSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
        MKDPLERTKVVIRHLPPSL HSDLFHHIHDRF GRFNWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGH+FVNEKGAQYKAVVEYAPSQRVPR
Subjt:  MKDPLERTKVVIRHLPPSLSHSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR

Query:  SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR
        SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKE PIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPE NSMKR
Subjt:  SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR

Query:  GMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSAIGISDVGTADFGKKKILLLKGKERDISHVSDDMLQLQSATSSGNSPASASKHNHRREAGGG
        GMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSS IGISDV TADFGKKKILLLKGKERDISHVSD MLQLQSATSS  SPASASKHN RREA G 
Subjt:  GMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSAIGISDVGTADFGKKKILLLKGKERDISHVSDDMLQLQSATSSGNSPASASKHNHRREAGGG

Query:  VIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPTNARSGSNDISSNEPNPSGSEGDGKRASDNKFSKKELHGLGSASEKQEKRIRNKDRPDRG
        +IRSILLNNEARHGQ+SSVAQSH KIQILNSDNGKRPPRP NARSGSND+SSNEPNPSGSEGDGKRA D KFSKKELHGLGS +EKQEKRIRNKDRPDRG
Subjt:  VIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPTNARSGSNDISSNEPNPSGSEGDGKRASDNKFSKKELHGLGSASEKQEKRIRNKDRPDRG

Query:  VWAPRSRSDASVSQLEESSVPQSSHLLSDSVEAFRGEMKEDIHGSRTGDVTTIVSGRNSSVENGSVRHVGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGH
        VWAPRSRSDASVSQLEESSV QSSHLLSDSVEA+RGEMKED+HGSRTGDVTT VSGRNSSVENGSVRHVGRRGA HVMKDDGSLNPNEGKPSKRGVAGGH
Subjt:  VWAPRSRSDASVSQLEESSVPQSSHLLSDSVEAFRGEMKEDIHGSRTGDVTTIVSGRNSSVENGSVRHVGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGH

Query:  EKQVWVQKSSSGS
        EKQVWVQKSSSGS
Subjt:  EKQVWVQKSSSGS

TrEMBL top hitse value%identityAlignment
A0A0A0KSY5 Smg4_UPF3 domain-containing protein1.0e-282100Show/hide
Query:  MKDPLERTKVVIRHLPPSLSHSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
        MKDPLERTKVVIRHLPPSLSHSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
Subjt:  MKDPLERTKVVIRHLPPSLSHSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR

Query:  SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR
        SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR
Subjt:  SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR

Query:  GMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSAIGISDVGTADFGKKKILLLKGKERDISHVSDDMLQLQSATSSGNSPASASKHNHRREAGGG
        GMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSAIGISDVGTADFGKKKILLLKGKERDISHVSDDMLQLQSATSSGNSPASASKHNHRREAGGG
Subjt:  GMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSAIGISDVGTADFGKKKILLLKGKERDISHVSDDMLQLQSATSSGNSPASASKHNHRREAGGG

Query:  VIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPTNARSGSNDISSNEPNPSGSEGDGKRASDNKFSKKELHGLGSASEKQEKRIRNKDRPDRG
        VIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPTNARSGSNDISSNEPNPSGSEGDGKRASDNKFSKKELHGLGSASEKQEKRIRNKDRPDRG
Subjt:  VIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPTNARSGSNDISSNEPNPSGSEGDGKRASDNKFSKKELHGLGSASEKQEKRIRNKDRPDRG

Query:  VWAPRSRSDASVSQLEESSVPQSSHLLSDSVEAFRGEMKEDIHGSRTGDVTTIVSGRNSSVENGSVRHVGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGH
        VWAPRSRSDASVSQLEESSVPQSSHLLSDSVEAFRGEMKEDIHGSRTGDVTTIVSGRNSSVENGSVRHVGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGH
Subjt:  VWAPRSRSDASVSQLEESSVPQSSHLLSDSVEAFRGEMKEDIHGSRTGDVTTIVSGRNSSVENGSVRHVGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGH

Query:  EKQVWVQKSSSGS
        EKQVWVQKSSSGS
Subjt:  EKQVWVQKSSSGS

A0A1S3CB69 regulator of nonsense transcripts UPF3 isoform X11.7e-27798.25Show/hide
Query:  MKDPLERTKVVIRHLPPSLSHSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
        MKDPLERTKVVIRHLPPSLSHSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
Subjt:  MKDPLERTKVVIRHLPPSLSHSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR

Query:  SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR
        SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR
Subjt:  SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR

Query:  GMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSAIGISDVGTADFGKKKILLLKGKERDISHVSDDMLQLQSATSSGNSPASASKHNHRREAGGG
        GMEKKKYILKDSVKNTNRRDKSNFILVPRR+DQSA SS IGISDVG ADFGKKKILLLKGKERDISHVSDDMLQLQSATSSGNSPASASKHNHRREAGG 
Subjt:  GMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSAIGISDVGTADFGKKKILLLKGKERDISHVSDDMLQLQSATSSGNSPASASKHNHRREAGGG

Query:  VIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPTNARSGSNDISSNEPNPSGSEGDGKRASDNKFSKKELHGLGSASEKQEKRIRNKDRPDRG
        VIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPTNARSGSNDISSNEPNPSGSEGDGKRA DNKFSKKELHGLGSASEKQEKRIRNKDRPDRG
Subjt:  VIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPTNARSGSNDISSNEPNPSGSEGDGKRASDNKFSKKELHGLGSASEKQEKRIRNKDRPDRG

Query:  VWAPRSRSDASVSQLEESSVPQSSHLLSDSVEAFRGEMKEDIHGSRTGDVTTIVSGRNSSVENGSVRHVGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGH
        VWAPRSRSDASVSQLEESSV QSSHLLSDSVEA+RGEMKEDIHGSRT DVTTIVSGRNSSVENGSVRHVGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGH
Subjt:  VWAPRSRSDASVSQLEESSVPQSSHLLSDSVEAFRGEMKEDIHGSRTGDVTTIVSGRNSSVENGSVRHVGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGH

Query:  EKQVWVQKSSSGS
        EKQVWVQKSSSGS
Subjt:  EKQVWVQKSSSGS

A0A1S3CBX5 regulator of nonsense transcripts UPF3 isoform X21.4e-27196.88Show/hide
Query:  MKDPLERTKVVIRHLPPSLSHSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
        MKDPLERTKVVIRHLPPSLSHSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
Subjt:  MKDPLERTKVVIRHLPPSLSHSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR

Query:  SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR
        SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR
Subjt:  SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR

Query:  GMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSAIGISDVGTADFGKKKILLLKGKERDISHVSDDMLQLQSATSSGNSPASASKHNHRREAGGG
        GMEKKKYILKDSVKNTNRRDKSNFILVPRR+DQSA SS IGISDVG ADFGKKKILLLKGKERDISH       LQSATSSGNSPASASKHNHRREAGG 
Subjt:  GMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSAIGISDVGTADFGKKKILLLKGKERDISHVSDDMLQLQSATSSGNSPASASKHNHRREAGGG

Query:  VIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPTNARSGSNDISSNEPNPSGSEGDGKRASDNKFSKKELHGLGSASEKQEKRIRNKDRPDRG
        VIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPTNARSGSNDISSNEPNPSGSEGDGKRA DNKFSKKELHGLGSASEKQEKRIRNKDRPDRG
Subjt:  VIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPTNARSGSNDISSNEPNPSGSEGDGKRASDNKFSKKELHGLGSASEKQEKRIRNKDRPDRG

Query:  VWAPRSRSDASVSQLEESSVPQSSHLLSDSVEAFRGEMKEDIHGSRTGDVTTIVSGRNSSVENGSVRHVGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGH
        VWAPRSRSDASVSQLEESSV QSSHLLSDSVEA+RGEMKEDIHGSRT DVTTIVSGRNSSVENGSVRHVGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGH
Subjt:  VWAPRSRSDASVSQLEESSVPQSSHLLSDSVEAFRGEMKEDIHGSRTGDVTTIVSGRNSSVENGSVRHVGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGH

Query:  EKQVWVQKSSSGS
        EKQVWVQKSSSGS
Subjt:  EKQVWVQKSSSGS

A0A6J1D8M3 regulator of nonsense transcripts UPF3 isoform X12.2e-25690.84Show/hide
Query:  MKDPLERTKVVIRHLPPSLSHSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
        MKDPLERTKVVIRHLPPSL HSDLFHHI DRFAGR+NW YYRPGKTSQKDQRY+RAYIDFTRPEDVFEFAEFFDGHVFVNEKG QYKAV+EYAPSQRVPR
Subjt:  MKDPLERTKVVIRHLPPSLSHSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR

Query:  SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR
        SSTKKDGR+GTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSG AKETPIVTPLMEFVRQKRAVESGTQGSSV RKVKRGG ASSRKPESNSMKR
Subjt:  SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR

Query:  GMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSAIGISDVGTADFGKKKILLLKGKERDISHVSDDMLQLQSATSSGNSPASASKHNHRREAGGG
        GMEKKKYILKDSVKNTNRRDKSNFILVPRR+DQ ATSS IGISDV TAD GKKKILLLKGKERDISHV+D ML LQSA+SSGNSP +A+K N RREA G 
Subjt:  GMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSAIGISDVGTADFGKKKILLLKGKERDISHVSDDMLQLQSATSSGNSPASASKHNHRREAGGG

Query:  VIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPTNARSGSNDISSNEPNPSGSEGDGKRASDNKFSKKELHGLGSASEKQEKRIRNKDRPDRG
        +IRSILLNNE RHGQ SSV+QSHQKIQILNSDNGKRPPRP NARSGSND+S+NEPNPSGSEGDGKRA ++KFSKKELHGLGSASEKQEKRIRNKDRPDRG
Subjt:  VIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPTNARSGSNDISSNEPNPSGSEGDGKRASDNKFSKKELHGLGSASEKQEKRIRNKDRPDRG

Query:  VWAPRSRSDASVSQLEESSVPQSSHLLSDSVEAFRGEMKEDIHGSRTGDVTTIVSGRNSSVENGSVRHVGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGH
        VWAPRSRSDA VSQL+ESS+ QSSHLLSDSVEAFR EMK+DIHGSRTGDVTT VSGR SSVENGSVRHVGRRGAGHVMKDDGSLNPNEGK SKRG+AGGH
Subjt:  VWAPRSRSDASVSQLEESSVPQSSHLLSDSVEAFRGEMKEDIHGSRTGDVTTIVSGRNSSVENGSVRHVGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGH

Query:  EKQVWVQKSSSGS
        EKQVWVQKSSSGS
Subjt:  EKQVWVQKSSSGS

A0A6J1I7G4 regulator of nonsense transcripts UPF3-like isoform X11.2e-25790.84Show/hide
Query:  MKDPLERTKVVIRHLPPSLSHSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
        MKDPLERTKVVIRHLPPSL HSDLFHHIHDRFAGR+NW Y+RPGKTSQK+QRYARAYIDFT PEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
Subjt:  MKDPLERTKVVIRHLPPSLSHSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR

Query:  SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR
        SS+KKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSG AK+TPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRG AASSRK ESNSMKR
Subjt:  SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR

Query:  GMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSAIGISDVGTADFGKKKILLLKGKERDISHVSDDMLQLQSATSSGNSPASASKHNHRREAGGG
        GMEKKKYILKDS KNTNRRDKSNFILVPRREDQSATSS IGISDVGTAD GKKKILLLKGK RD+SH++D MLQ QSATSSGNSPA+A+K N RREAGG 
Subjt:  GMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSAIGISDVGTADFGKKKILLLKGKERDISHVSDDMLQLQSATSSGNSPASASKHNHRREAGGG

Query:  VIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPTNARSGSNDISSNEPNPSGSEGDGKRASDNKFSKKELHGLGSASEKQEKRIRNKDRPDRG
        +IRSILLNN+ARHGQSSSVAQSHQKIQILNSDNGKRPPRP N+RSGSND+SSN+PNPSGSEGDGKRA +NKF+KKE HGLG+ASEKQEKRIRNKDRPDRG
Subjt:  VIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPTNARSGSNDISSNEPNPSGSEGDGKRASDNKFSKKELHGLGSASEKQEKRIRNKDRPDRG

Query:  VWAPRSRSDASVSQLEESSVPQSSHLLSDSVEAFRGEMKEDIHGSRTGDVTTIVSGRNSSVENGSVRHVGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGH
        VWAPR RSDASVSQL+ESSV QS+HLLSDSVEA+RGEMK+D+HGSRTGDVTT VSGR+SSVENGSVRHVGRRGA H+MKDDGSLNPNEGKPSKRGVAGGH
Subjt:  VWAPRSRSDASVSQLEESSVPQSSHLLSDSVEAFRGEMKEDIHGSRTGDVTTIVSGRNSSVENGSVRHVGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGH

Query:  EKQVWVQKSSSGS
        EKQVWVQKSSSGS
Subjt:  EKQVWVQKSSSGS

SwissProt top hitse value%identityAlignment
B0S733 Regulator of nonsense transcripts 3A1.5e-1526.59Show/hide
Query:  TKVVIRHLPPSLSHSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSS-TKKD
        +KVVIR LPPSLS   L  H+       F++  + P   S     ++RAYI+F  PED+  F + FDG+VF++ KG +Y AVVE+AP Q+V +    KKD
Subjt:  TKVVIRHLPPSLSHSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSS-TKKD

Query:  GREGTIYKDPDYLEFL--------KLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSM
         + GTI +DP+Y  FL        K +A P   L   EI+ + +E      AK T   TPL+E+++ K+  +   +      + +R      ++ E    
Subjt:  GREGTIYKDPDYLEFL--------KLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSM

Query:  KRGMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSAIGISDVGTADFGKKKILLLKGKERDISHVSDDMLQLQSATSSGNSPASASKHNHRREAG
        +R  E++K   K++ K     +K   I + ++ D+     +  + D G +   +K      G         D+  Q++      N       H  R+   
Subjt:  KRGMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSAIGISDVGTADFGKKKILLLKGKERDISHVSDDMLQLQSATSSGNSPASASKHNHRREAG

Query:  GGVIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPTNARSGSNDISSNEPNPSGSEGDGKRASDNKFSKKELHGLGSASEKQEKRIRNKDRPD
                 + + R        Q H        D   R    T    G     + +    G     +  + +K  K++   +GS  E    RIRNKDRP 
Subjt:  GGVIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPTNARSGSNDISSNEPNPSGSEGDGKRASDNKFSKKELHGLGSASEKQEKRIRNKDRPD

Query:  RGVWAPRSRS
          ++ P +R+
Subjt:  RGVWAPRSRS

Q10267 Nonsense-mediated mRNA decay protein 31.1e-1025.74Show/hide
Query:  KVVIRHLPPSLSHSDLFHHIHDRFAGRFNWSYYRPGKTS--QKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSSTKKD
        KV++ +LPP+L        I+  F     W  +  GK +   + +  + AY+ F     V EF   + GH F+++K   Y+A+V  AP Q++P S  K D
Subjt:  KVVIRHLPPSLSHSDLFHHIHDRFAGRFNWSYYRPGKTS--QKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSSTKKD

Query:  GREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKR--AVESGTQGSSVPRKVKRGGAASSRKPESNSMKRGMEK
          EG++ +DP + EF              + +   + A      ++    TPL++++ +K+   VE G    S      +     + KP SN+ K G   
Subjt:  GREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKR--AVESGTQGSSVPRKVKRGGAASSRKPESNSMKRGMEK

Query:  KK
        ++
Subjt:  KK

Q9BZI7 Regulator of nonsense transcripts 3B5.4e-1827.31Show/hide
Query:  TKVVIRHLPPSLSHSDLFHHI-----HDRFAGRFNWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSS
        +KVVIR LPP+L+   L  H+     HD F        +    TS     YARAYI+F   ED+  F + FDG+VF++ KG +Y A+VE+AP Q+  +  
Subjt:  TKVVIRHLPPSLSHSDLFHHI-----HDRFAGRFNWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSS

Query:  TKK-DGREGTIYKDPDYLEFLKLIAKPAEHLPSA-EIQLERKEAEQSG--AAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSM
        TKK D + GTI  DP+Y +FL+  A   E + S  E  LE  EA+     A K TP+++ L    R +       +   + RK +R       K E    
Subjt:  TKK-DGREGTIYKDPDYLEFLKLIAKPAEHLPSA-EIQLERKEAEQSG--AAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSM

Query:  KRGMEKKKYI--------LKDSVKNTNRR------DKSNFILVPRREDQSATSSAIGISDVGTADFGKKKILLLKGKERDISHVSDDMLQLQSATSSGNS
        ++ +EK K I        LKD  K    R      ++ N +  P + D+               +  K++    K K+ D  ++SD+    QS T    S
Subjt:  KRGMEKKKYI--------LKDSVKNTNRR------DKSNFILVPRREDQSATSSAIGISDVGTADFGKKKILLLKGKERDISHVSDDMLQLQSATSSGNS

Query:  PASASKHNHRR---EAGGGVIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPTNARSGSNDISSNEPNPSGSEGDGKRASDNKFSKKELHGLG
         +       +R   E+G    R               + +  ++++    +  ++  R    ++        +      E D  R    K    E  G  
Subjt:  PASASKHNHRR---EAGGGVIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPTNARSGSNDISSNEPNPSGSEGDGKRASDNKFSKKELHGLG

Query:  SASEKQEK-----RIRNKDRPDRGVWAPRSRS
          +EK+E+     RIRNKDRP   ++ P +RS
Subjt:  SASEKQEK-----RIRNKDRPDRGVWAPRSRS

Q9FVW4 Regulator of nonsense transcripts UPF31.7e-10947.74Show/hide
Query:  MKDPLERTKVVIRHLPPSLSHSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
        MK+PL++ KVV+RHLPPSLS SDL   I  RFA R+NW  +RPGK+S K+Q+Y+RAY+ F  PEDV+EFA FF+GHVFVNEKGAQ+KA+VEYAPSQRVP+
Subjt:  MKDPLERTKVVIRHLPPSLSHSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR

Query:  SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQG-SSVPRKVKRGGAASSRKPESNSMK
         S KKD REG+I KDPDYLEFLK+IA+P E+LPSAEIQLER+EAEQSGA+K  PIVTPLMEF+RQKRA   G QG S + R  +R    S+ KP     K
Subjt:  SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQG-SSVPRKVKRGGAASSRKPESNSMK

Query:  RGMEKKKYILKDSVKNTNRR---DKSNFILVPRREDQSA-------TSSAIGISDVG---TADFGKKKILLLKGKERDISHVSDDMLQLQSATSSGNSPA
        R  EKKKY+ K+S KN  R+   D S+     R+ + S        T++ I  S  G   T D GKKKILLL+ K+RD         +    T+   + +
Subjt:  RGMEKKKYILKDSVKNTNRR---DKSNFILVPRREDQSA-------TSSAIGISDVG---TADFGKKKILLLKGKERDISHVSDDMLQLQSATSSGNSPA

Query:  SASKHNHRREAGGGVIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPTNARSGSNDISSNEPNPSGSEGDGKRASDNKFSKKELHGLGSASEK
        + S+ N + + GG +I+ ILL N++R  QSS+  QS Q+++   ++N KRP RP N R+G                            K+ H  G+ SEK
Subjt:  SASKHNHRREAGGGVIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPTNARSGSNDISSNEPNPSGSEGDGKRASDNKFSKKELHGLGSASEK

Query:  QEKRIRNKDRPDRGVWAPRSRSDASVSQLEESSVPQSSHLLSDSVEAFRGEMKEDIHGSRTGDVTTIVSGRNSSVENGSVRHVGRRGAGHVMKDDGSLNP
        QE+R RNKDRPDR +WAP  R D S  Q      P SS           GE+K+ +   R+G+V     G   ++ENGS RH  RR  G   K++  +  
Subjt:  QEKRIRNKDRPDRGVWAPRSRSDASVSQLEESSVPQSSHLLSDSVEAFRGEMKEDIHGSRTGDVTTIVSGRNSSVENGSVRHVGRRGAGHVMKDDGSLNP

Query:  NEGKPSKRGVAGG---HEKQVWVQKSSSGS
         EGK S+RG  GG   HEKQ+W+QK SSG+
Subjt:  NEGKPSKRGVAGG---HEKQVWVQKSSSGS

Q9H1J1 Regulator of nonsense transcripts 3A4.6e-0924.64Show/hide
Query:  TKVVIRHLPPSLSHSDLFHHI-----HDRFAGRFNWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSS
        +KVVIR LPP L+   L   +     HD F        +     S     Y+RAYI+F  P+D+  F + FDG++F++ KG +Y AVVE+AP Q++ +  
Subjt:  TKVVIRHLPPSLSHSDLFHHI-----HDRFAGRFNWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSS

Query:  -TKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKRG
          KKD + G+I  DP+Y +FL+      E   SA  +    E E           TPL+E+++ ++  +   +     R+ +R      ++      +R 
Subjt:  -TKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKRG

Query:  MEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSAIGISDVGTADFGKKKILLLKGKERDISHVSDDMLQLQSATSSGNSPASASKHNHRREAGGGV
         E+++   K++ K     +K   I + ++ ++    +     + G      ++I    GK+   S     +++ +    S   P   S H+   +    V
Subjt:  MEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSAIGISDVGTADFGKKKILLLKGKERDISHVSDDMLQLQSATSSGNSPASASKHNHRREAGGGV

Query:  IRSILLNNEAR--HGQSSSVAQSHQKIQILN--SDNGKR---PPRPTNARSGSNDISSNEPNPSGSE-GDGKRASDNKFSKKELHGLGSASEKQEKRIRN
         RS    +EA+  H       ++H + + L+  S++ +R    P     + GS D  S  P  +    G  +R  D+   +KE             R+ N
Subjt:  IRSILLNNEAR--HGQSSSVAQSHQKIQILN--SDNGKR---PPRPTNARSGSNDISSNEPNPSGSE-GDGKRASDNKFSKKELHGLGSASEKQEKRIRN

Query:  KDRPDRGVWAPRSR
        KDRP   ++ P +R
Subjt:  KDRPDRGVWAPRSR

Arabidopsis top hitse value%identityAlignment
AT1G33980.1 Smg-4/UPF3 family protein1.2e-11047.74Show/hide
Query:  MKDPLERTKVVIRHLPPSLSHSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
        MK+PL++ KVV+RHLPPSLS SDL   I  RFA R+NW  +RPGK+S K+Q+Y+RAY+ F  PEDV+EFA FF+GHVFVNEKGAQ+KA+VEYAPSQRVP+
Subjt:  MKDPLERTKVVIRHLPPSLSHSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR

Query:  SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQG-SSVPRKVKRGGAASSRKPESNSMK
         S KKD REG+I KDPDYLEFLK+IA+P E+LPSAEIQLER+EAEQSGA+K  PIVTPLMEF+RQKRA   G QG S + R  +R    S+ KP     K
Subjt:  SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQG-SSVPRKVKRGGAASSRKPESNSMK

Query:  RGMEKKKYILKDSVKNTNRR---DKSNFILVPRREDQSA-------TSSAIGISDVG---TADFGKKKILLLKGKERDISHVSDDMLQLQSATSSGNSPA
        R  EKKKY+ K+S KN  R+   D S+     R+ + S        T++ I  S  G   T D GKKKILLL+ K+RD         +    T+   + +
Subjt:  RGMEKKKYILKDSVKNTNRR---DKSNFILVPRREDQSA-------TSSAIGISDVG---TADFGKKKILLLKGKERDISHVSDDMLQLQSATSSGNSPA

Query:  SASKHNHRREAGGGVIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPTNARSGSNDISSNEPNPSGSEGDGKRASDNKFSKKELHGLGSASEK
        + S+ N + + GG +I+ ILL N++R  QSS+  QS Q+++   ++N KRP RP N R+G                            K+ H  G+ SEK
Subjt:  SASKHNHRREAGGGVIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPTNARSGSNDISSNEPNPSGSEGDGKRASDNKFSKKELHGLGSASEK

Query:  QEKRIRNKDRPDRGVWAPRSRSDASVSQLEESSVPQSSHLLSDSVEAFRGEMKEDIHGSRTGDVTTIVSGRNSSVENGSVRHVGRRGAGHVMKDDGSLNP
        QE+R RNKDRPDR +WAP  R D S  Q      P SS           GE+K+ +   R+G+V     G   ++ENGS RH  RR  G   K++  +  
Subjt:  QEKRIRNKDRPDRGVWAPRSRSDASVSQLEESSVPQSSHLLSDSVEAFRGEMKEDIHGSRTGDVTTIVSGRNSSVENGSVRHVGRRGAGHVMKDDGSLNP

Query:  NEGKPSKRGVAGG---HEKQVWVQKSSSGS
         EGK S+RG  GG   HEKQ+W+QK SSG+
Subjt:  NEGKPSKRGVAGG---HEKQVWVQKSSSGS

AT1G33980.2 Smg-4/UPF3 family protein1.2e-10847.37Show/hide
Query:  MKDPLERTKVVIRHLPPSLSHSDLFHHIHDRFAGRFNWSYYRPGKT--SQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRV
        MK+PL++ KVV+RHLPPSLS SDL   I  RFA R+NW  +RPGK+    K+Q+Y+RAY+ F  PEDV+EFA FF+GHVFVNEKGAQ+KA+VEYAPSQRV
Subjt:  MKDPLERTKVVIRHLPPSLSHSDLFHHIHDRFAGRFNWSYYRPGKT--SQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRV

Query:  PRSSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQG-SSVPRKVKRGGAASSRKPESNS
        P+ S KKD REG+I KDPDYLEFLK+IA+P E+LPSAEIQLER+EAEQSGA+K  PIVTPLMEF+RQKRA   G QG S + R  +R    S+ KP    
Subjt:  PRSSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQG-SSVPRKVKRGGAASSRKPESNS

Query:  MKRGMEKKKYILKDSVKNTNRR---DKSNFILVPRREDQSA-------TSSAIGISDVG---TADFGKKKILLLKGKERDISHVSDDMLQLQSATSSGNS
         KR  EKKKY+ K+S KN  R+   D S+     R+ + S        T++ I  S  G   T D GKKKILLL+ K+RD         +    T+   +
Subjt:  MKRGMEKKKYILKDSVKNTNRR---DKSNFILVPRREDQSA-------TSSAIGISDVG---TADFGKKKILLLKGKERDISHVSDDMLQLQSATSSGNS

Query:  PASASKHNHRREAGGGVIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPTNARSGSNDISSNEPNPSGSEGDGKRASDNKFSKKELHGLGSAS
         ++ S+ N + + GG +I+ ILL N++R  QSS+  QS Q+++   ++N KRP RP N R+G                            K+ H  G+ S
Subjt:  PASASKHNHRREAGGGVIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPTNARSGSNDISSNEPNPSGSEGDGKRASDNKFSKKELHGLGSAS

Query:  EKQEKRIRNKDRPDRGVWAPRSRSDASVSQLEESSVPQSSHLLSDSVEAFRGEMKEDIHGSRTGDVTTIVSGRNSSVENGSVRHVGRRGAGHVMKDDGSL
        EKQE+R RNKDRPDR +WAP  R D S  Q      P SS           GE+K+ +   R+G+V     G   ++ENGS RH  RR  G   K++  +
Subjt:  EKQEKRIRNKDRPDRGVWAPRSRSDASVSQLEESSVPQSSHLLSDSVEAFRGEMKEDIHGSRTGDVTTIVSGRNSSVENGSVRHVGRRGAGHVMKDDGSL

Query:  NPNEGKPSKRGVAGG---HEKQVWVQKSSSGS
           EGK S+RG  GG   HEKQ+W+QK SSG+
Subjt:  NPNEGKPSKRGVAGG---HEKQVWVQKSSSGS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGACCCGTTGGAGAGGACCAAAGTAGTGATTAGGCACTTGCCCCCTTCTCTTTCTCACTCAGATCTCTTCCACCATATTCATGATCGATTCGCTGGTCGCTTTAA
TTGGTCTTACTATCGTCCCGGAAAGACCAGTCAGAAGGACCAGAGGTACGCTCGAGCCTACATAGACTTTACCAGACCTGAAGATGTTTTTGAGTTTGCCGAGTTCTTTG
ATGGCCATGTTTTCGTTAATGAGAAGGGTGCTCAGTATAAGGCTGTAGTTGAATATGCACCTTCACAGCGTGTTCCAAGATCATCTACCAAGAAGGATGGTCGTGAGGGG
ACAATATACAAAGATCCAGATTATTTGGAGTTTCTCAAACTTATTGCAAAGCCTGCCGAGCATCTTCCAAGTGCTGAAATACAATTGGAAAGGAAAGAAGCAGAGCAATC
TGGTGCTGCAAAAGAAACTCCAATTGTTACCCCTCTCATGGAGTTTGTACGCCAGAAACGAGCAGTTGAAAGCGGAACACAGGGATCTTCAGTACCTCGGAAGGTTAAAA
GGGGTGGGGCAGCATCATCTAGAAAGCCTGAGTCGAATTCCATGAAGCGAGGGATGGAGAAAAAGAAGTATATCTTAAAGGACAGTGTAAAGAACACAAACCGCAGAGAC
AAGTCAAATTTCATTTTGGTGCCCAGGCGAGAGGATCAGTCGGCTACTTCAAGTGCAATTGGAATTTCAGATGTTGGTACAGCTGACTTTGGAAAGAAAAAAATTCTGCT
TCTCAAGGGAAAGGAGCGAGATATATCTCATGTTTCTGATGACATGTTACAGTTGCAGAGTGCTACATCTTCTGGGAATTCTCCTGCAAGTGCATCAAAACATAATCATA
GGCGTGAGGCTGGTGGAGGCGTGATCAGAAGCATTCTTTTAAATAATGAAGCACGTCATGGACAGAGTTCATCAGTAGCTCAGTCTCATCAAAAGATTCAGATCCTGAAC
TCGGACAACGGGAAGCGTCCACCTCGTCCCACTAATGCTCGATCTGGGTCTAATGATATCTCCAGTAATGAACCAAATCCATCTGGTTCAGAAGGGGATGGAAAAAGGGC
TTCAGACAATAAGTTTAGTAAAAAGGAACTTCATGGCCTGGGTAGTGCTAGTGAGAAGCAAGAGAAACGAATAAGAAACAAAGATAGACCTGATCGTGGAGTCTGGGCAC
CACGCAGTCGTTCAGATGCCTCAGTCTCACAACTTGAGGAATCCTCTGTTCCACAATCTAGTCATTTGCTTTCTGACTCAGTTGAAGCATTCCGTGGGGAAATGAAAGAA
GATATTCATGGAAGCAGGACTGGGGATGTTACAACCATTGTGAGTGGGCGTAACAGTTCGGTGGAAAATGGTTCTGTTAGACATGTTGGACGTCGTGGGGCTGGCCATGT
TATGAAGGATGATGGGTCTTTGAACCCAAATGAAGGGAAGCCATCCAAAAGAGGTGTTGCTGGTGGTCATGAGAAACAAGTATGGGTTCAGAAGTCATCTTCAGGTTCTT
AG
mRNA sequenceShow/hide mRNA sequence
CGAGCTTTCGGTCGTTTCTTCTTCTCCGAACTCTCGTCGTTAGCGTTAGTAACCCCAATTCCCAAAAAACATTTTGTTGTTCTTGACTTGGTTGAGAATTTAGAAACCAA
AAGCCGGAGGGGAAATTCTCGAATTCTTTTGTTGGTGTTCGCAGTGCGAGTGCGGGGGGGTTTTTCAGATGAAGGACCCGTTGGAGAGGACCAAAGTAGTGATTAGGCAC
TTGCCCCCTTCTCTTTCTCACTCAGATCTCTTCCACCATATTCATGATCGATTCGCTGGTCGCTTTAATTGGTCTTACTATCGTCCCGGAAAGACCAGTCAGAAGGACCA
GAGGTACGCTCGAGCCTACATAGACTTTACCAGACCTGAAGATGTTTTTGAGTTTGCCGAGTTCTTTGATGGCCATGTTTTCGTTAATGAGAAGGGTGCTCAGTATAAGG
CTGTAGTTGAATATGCACCTTCACAGCGTGTTCCAAGATCATCTACCAAGAAGGATGGTCGTGAGGGGACAATATACAAAGATCCAGATTATTTGGAGTTTCTCAAACTT
ATTGCAAAGCCTGCCGAGCATCTTCCAAGTGCTGAAATACAATTGGAAAGGAAAGAAGCAGAGCAATCTGGTGCTGCAAAAGAAACTCCAATTGTTACCCCTCTCATGGA
GTTTGTACGCCAGAAACGAGCAGTTGAAAGCGGAACACAGGGATCTTCAGTACCTCGGAAGGTTAAAAGGGGTGGGGCAGCATCATCTAGAAAGCCTGAGTCGAATTCCA
TGAAGCGAGGGATGGAGAAAAAGAAGTATATCTTAAAGGACAGTGTAAAGAACACAAACCGCAGAGACAAGTCAAATTTCATTTTGGTGCCCAGGCGAGAGGATCAGTCG
GCTACTTCAAGTGCAATTGGAATTTCAGATGTTGGTACAGCTGACTTTGGAAAGAAAAAAATTCTGCTTCTCAAGGGAAAGGAGCGAGATATATCTCATGTTTCTGATGA
CATGTTACAGTTGCAGAGTGCTACATCTTCTGGGAATTCTCCTGCAAGTGCATCAAAACATAATCATAGGCGTGAGGCTGGTGGAGGCGTGATCAGAAGCATTCTTTTAA
ATAATGAAGCACGTCATGGACAGAGTTCATCAGTAGCTCAGTCTCATCAAAAGATTCAGATCCTGAACTCGGACAACGGGAAGCGTCCACCTCGTCCCACTAATGCTCGA
TCTGGGTCTAATGATATCTCCAGTAATGAACCAAATCCATCTGGTTCAGAAGGGGATGGAAAAAGGGCTTCAGACAATAAGTTTAGTAAAAAGGAACTTCATGGCCTGGG
TAGTGCTAGTGAGAAGCAAGAGAAACGAATAAGAAACAAAGATAGACCTGATCGTGGAGTCTGGGCACCACGCAGTCGTTCAGATGCCTCAGTCTCACAACTTGAGGAAT
CCTCTGTTCCACAATCTAGTCATTTGCTTTCTGACTCAGTTGAAGCATTCCGTGGGGAAATGAAAGAAGATATTCATGGAAGCAGGACTGGGGATGTTACAACCATTGTG
AGTGGGCGTAACAGTTCGGTGGAAAATGGTTCTGTTAGACATGTTGGACGTCGTGGGGCTGGCCATGTTATGAAGGATGATGGGTCTTTGAACCCAAATGAAGGGAAGCC
ATCCAAAAGAGGTGTTGCTGGTGGTCATGAGAAACAAGTATGGGTTCAGAAGTCATCTTCAGGTTCTTAGCATAATTAAATCATATAGTGGCATCCAGACAGGACTATGG
TTCCTCAAACTTCCAGGGGGATTATCTCCATTCTGAGGACTTAATGCACATCCTCAGAAGGCATCATGTAAAATGGAGATACGCCCTGGAAGCAGTTGGTAACAGTAATA
GGTTTCGTGAACTGGATTGCAAGACTTGCAATTGTTTCGTCGTATACAGGTGGTTACAAAACACAAGGTTCTCTGGTTGAAGACCGAATGTGCGTTCTATGGATTTTTGG
TTTTACGAAATCGAAGTTTCTTTGGTTGAAGACCAAATATGGTTGTGGATTTTGGTTTGGTATGATCTGATTTTTTTGCCCAACATACCAAGTGTGACTGCTTCACCTGG
AGGAACGTGCTGGTACATACATACGTGGCTCGAATGACAGGAGATCAAAGCCAAGAGGGAGATTCCAACTTTCCCTTTGCTTGATGTTTTGGTCACGAGCCAAGTTTTTT
TTTTCCCTTGGAAGCTGAATGTAGGAAGTACTTAGTAGTGCTCTACTTACCATAATCTCACTGGGGGTGGTTGGTACACAATTGTACTTTGATTCTATGCGTGGGGCAGT
GAATCAGAAACATCAAAGTTATACTGTTTCATGTCGTATATGAAAAATGTGATGGATTATGATGATGTGTTTTTATCGACTAATATATATCAGTTTTATTTATTTTCCAT
TGTGCTATAATTTCATATTATGGTTGTACTATTTGGTC
Protein sequenceShow/hide protein sequence
MKDPLERTKVVIRHLPPSLSHSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSSTKKDGREG
TIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKRGMEKKKYILKDSVKNTNRRD
KSNFILVPRREDQSATSSAIGISDVGTADFGKKKILLLKGKERDISHVSDDMLQLQSATSSGNSPASASKHNHRREAGGGVIRSILLNNEARHGQSSSVAQSHQKIQILN
SDNGKRPPRPTNARSGSNDISSNEPNPSGSEGDGKRASDNKFSKKELHGLGSASEKQEKRIRNKDRPDRGVWAPRSRSDASVSQLEESSVPQSSHLLSDSVEAFRGEMKE
DIHGSRTGDVTTIVSGRNSSVENGSVRHVGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGHEKQVWVQKSSSGS