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CSPI06G00040 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G00040
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionribosomal protein S1
Genome locationChr6:43964..44372
RNA-Seq ExpressionCSPI06G00040
SyntenyCSPI06G00040
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN45607.1 hypothetical protein Csa_005067 [Cucumis sativus]1.3e-28100Show/hide
Query:  MILTPEDKIHKPKLVFEKVVLFSLLVFSEGRDEMVEMFRQRIAQAMALAGGLLGFHPKLLISYLFVMEV
        MILTPEDKIHKPKLVFEKVVLFSLLVFSEGRDEMVEMFRQRIAQAMALAGGLLGFHPKLLISYLFVMEV
Subjt:  MILTPEDKIHKPKLVFEKVVLFSLLVFSEGRDEMVEMFRQRIAQAMALAGGLLGFHPKLLISYLFVMEV
TrEMBL top hitse value%identityAlignment
A0A0A0KB49 Uncharacterized protein6.2e-29100Show/hide
Query:  MILTPEDKIHKPKLVFEKVVLFSLLVFSEGRDEMVEMFRQRIAQAMALAGGLLGFHPKLLISYLFVMEV
        MILTPEDKIHKPKLVFEKVVLFSLLVFSEGRDEMVEMFRQRIAQAMALAGGLLGFHPKLLISYLFVMEV
Subjt:  MILTPEDKIHKPKLVFEKVVLFSLLVFSEGRDEMVEMFRQRIAQAMALAGGLLGFHPKLLISYLFVMEV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G30510.1 ribosomal protein S11.8e-0446.43Show/hide
Query:  TPEDKIHKPKLVFEKVVLFSLLVFSEGRDEMVEMFRQRIAQAMALA-GGLLGFHPK
        TP D I  PKLVFEK             +EM + FRQRIAQA A+A   +L F P+
Subjt:  TPEDKIHKPKLVFEKVVLFSLLVFSEGRDEMVEMFRQRIAQAMALA-GGLLGFHPK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATACTTACTCCTGAAGACAAGATTCACAAACCAAAGCTTGTTTTTGAGAAGGTAGTTCTATTTTCATTGCTTGTATTTTCAGAAGGCAGAGACGAGATGGTTGAGAT
GTTCAGGCAAAGAATAGCTCAAGCAATGGCTCTTGCAGGCGGCCTTCTCGGATTTCATCCGAAGTTACTTATTAGTTATTTGTTTGTCATGGAGGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATACTTACTCCTGAAGACAAGATTCACAAACCAAAGCTTGTTTTTGAGAAGGTAGTTCTATTTTCATTGCTTGTATTTTCAGAAGGCAGAGACGAGATGGTTGAGAT
GTTCAGGCAAAGAATAGCTCAAGCAATGGCTCTTGCAGGCGGCCTTCTCGGATTTCATCCGAAGTTACTTATTAGTTATTTGTTTGTCATGGAGGTTTGA
Protein sequenceShow/hide protein sequence
MILTPEDKIHKPKLVFEKVVLFSLLVFSEGRDEMVEMFRQRIAQAMALAGGLLGFHPKLLISYLFVMEV