; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI06G00210 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G00210
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptiontRNA pseudouridine synthase
Genome locationChr6:189535..192681
RNA-Seq ExpressionCSPI06G00210
SyntenyCSPI06G00210
Gene Ontology termsGO:0001522 - pseudouridine synthesis (biological process)
GO:0008033 - tRNA processing (biological process)
GO:0034196 - acylglycerol transport (biological process)
GO:1990052 - ER to chloroplast lipid transport (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0070300 - phosphatidic acid binding (molecular function)
GO:0106029 - tRNA pseudouridine synthase activity (molecular function)
InterPro domainsIPR001406 - Pseudouridine synthase I, TruA
IPR020094 - Pseudouridine synthase TruA/RsuA/RluB/E/F, N-terminal
IPR020095 - Pseudouridine synthase I, TruA, C-terminal
IPR020097 - Pseudouridine synthase I, TruA, alpha/beta domain
IPR020103 - Pseudouridine synthase, catalytic domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK02989.1 protein TRIGALACTOSYLDIACYLGLYCEROL 4 [Cucumis melo var. makuwa]1.3e-17995.96Show/hide
Query:  MRCWAVGSPVLPPISLPLSPIIPSPNGASSSSSRGFPNAEDDASYIKEPSFPCFKWRLLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKDLHL
        MRCWAVGSPVLPPISLP SPIIPSPNGASSSSSRGFPNAE D+SYI EP FP FKWRLLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKDLHL
Subjt:  MRCWAVGSPVLPPISLPLSPIIPSPNGASSSSSRGFPNAEDDASYIKEPSFPCFKWRLLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKDLHL

Query:  VGASRTDKGVHAWGQVAHFVTPFNYDSLESIHAALNGLLPVDIRVREMSPAVPDFHARFSTLSKVYHYKIYSGTIMDPFQRCYSYHCVYKLNYAAMKEAA
        VGASRTDKGVHAWGQVAHFVTPFNYDSLES+HAALNGLLPVDIRVREMSPA PDFHARFSTLSKVYHYKIY+GTIMDPFQRCY+YHCVYKLNYAAMKEAA
Subjt:  VGASRTDKGVHAWGQVAHFVTPFNYDSLESIHAALNGLLPVDIRVREMSPAVPDFHARFSTLSKVYHYKIYSGTIMDPFQRCYSYHCVYKLNYAAMKEAA

Query:  NYFVGKHDFSAFTNAAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRRELAKYASGVPPQGLCL
        NYFVGKHDFSAFTNAAHN+RVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDR+ELAKYASGVPPQGLCL
Subjt:  NYFVGKHDFSAFTNAAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRRELAKYASGVPPQGLCL

Query:  VSINYKEDHLKLPSDCPGTSFG
        VSINYKEDHLKLPSDCPGTS G
Subjt:  VSINYKEDHLKLPSDCPGTSFG

XP_004138518.2 uncharacterized protein LOC101205797 [Cucumis sativus]7.7e-19699.4Show/hide
Query:  MRCWAVGSPVLPPISLPLSPIIPSPNGASSSSSRGFPNAEDDASYIKEPSFPCFKWRLLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKDLHL
        MRCWAVGSPVLPPISLPLSPIIPSPNGASSSSSRGFPNAEDDASYIKEPSFPCFKWRLLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKDLHL
Subjt:  MRCWAVGSPVLPPISLPLSPIIPSPNGASSSSSRGFPNAEDDASYIKEPSFPCFKWRLLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKDLHL

Query:  VGASRTDKGVHAWGQVAHFVTPFNYDSLESIHAALNGLLPVDIRVREMSPAVPDFHARFSTLSKVYHYKIYSGTIMDPFQRCYSYHCVYKLNYAAMKEAA
        VGASRTDKGVHAWGQVAHFVTPFNYDSLES+HAALNGLLPVDIRVREMSPAVPDFHARFSTLSKVYHYKIYSGTIMDPFQRCY+YHCVYKLNYAAMKEAA
Subjt:  VGASRTDKGVHAWGQVAHFVTPFNYDSLESIHAALNGLLPVDIRVREMSPAVPDFHARFSTLSKVYHYKIYSGTIMDPFQRCYSYHCVYKLNYAAMKEAA

Query:  NYFVGKHDFSAFTNAAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRRELAKYASGVPPQGLCL
        NYFVGKHDFSAFTNAAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRRELAKYASGVPPQGLCL
Subjt:  NYFVGKHDFSAFTNAAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRRELAKYASGVPPQGLCL

Query:  VSINYKEDHLKLPSDCPGTSFGRTRSVSKCKVPFY
        VSINYKEDHLKLPSDCPGTSFGRTRSVSKCKVPFY
Subjt:  VSINYKEDHLKLPSDCPGTSFGRTRSVSKCKVPFY

XP_008458279.1 PREDICTED: tRNA pseudouridine synthase A 1 isoform X1 [Cucumis melo]3.8e-18795.52Show/hide
Query:  MRCWAVGSPVLPPISLPLSPIIPSPNGASSSSSRGFPNAEDDASYIKEPSFPCFKWRLLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKDLHL
        MRCWAVGSPVLPPISLP SPIIPSPNGASSSSSRGFPNAE D+SYI EP FP FKWRLLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKDLHL
Subjt:  MRCWAVGSPVLPPISLPLSPIIPSPNGASSSSSRGFPNAEDDASYIKEPSFPCFKWRLLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKDLHL

Query:  VGASRTDKGVHAWGQVAHFVTPFNYDSLESIHAALNGLLPVDIRVREMSPAVPDFHARFSTLSKVYHYKIYSGTIMDPFQRCYSYHCVYKLNYAAMKEAA
        VGASRTDKGVHAWGQVAHFVTPFNYDSLES+HAALNGLLPVDIRVREMSPA PDFHARFSTLSKVYHYKIY+GTIMDPFQRCY+YHCVYKLNYAAMKEAA
Subjt:  VGASRTDKGVHAWGQVAHFVTPFNYDSLESIHAALNGLLPVDIRVREMSPAVPDFHARFSTLSKVYHYKIYSGTIMDPFQRCYSYHCVYKLNYAAMKEAA

Query:  NYFVGKHDFSAFTNAAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRRELAKYASGVPPQGLCL
        NYFVGKHDFSAFTNAAHN+RVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDR+ELAKYASGVPPQGLCL
Subjt:  NYFVGKHDFSAFTNAAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRRELAKYASGVPPQGLCL

Query:  VSINYKEDHLKLPSDCPGTSFGRTRSVSKCKVPFY
        VSINYKEDHLKLPSDCPGTS GR+RSV KCKVPFY
Subjt:  VSINYKEDHLKLPSDCPGTSFGRTRSVSKCKVPFY

XP_038875516.1 tRNA pseudouridine synthase A 1 isoform X1 [Benincasa hispida]9.1e-18192.24Show/hide
Query:  MRCWAVGSPVLPPISLPLSPIIPSPNGASSSSSRGFPNAEDDASYIKEPSFPCFKWRLLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKDLHL
        MRCWAVGSPVLPPISLPLSP IP PNGASSSSSRG PNAE D+S I  P FP FKWRLLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKDLHL
Subjt:  MRCWAVGSPVLPPISLPLSPIIPSPNGASSSSSRGFPNAEDDASYIKEPSFPCFKWRLLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKDLHL

Query:  VGASRTDKGVHAWGQVAHFVTPFNYDSLESIHAALNGLLPVDIRVREMSPAVPDFHARFSTLSKVYHYKIYSGTIMDPFQRCYSYHCVYKLNYAAMKEAA
        VGASRTDKGVHAWGQVAHF+TPFNYDSLES+HAALNGLLPVDIRVRE+SPA PDFHARFSTLSKVYHYKIY+G I+DPFQRCY+YHCVYKLNYAAMKEAA
Subjt:  VGASRTDKGVHAWGQVAHFVTPFNYDSLESIHAALNGLLPVDIRVREMSPAVPDFHARFSTLSKVYHYKIYSGTIMDPFQRCYSYHCVYKLNYAAMKEAA

Query:  NYFVGKHDFSAFTNAAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRRELAKYASGVPPQGLCL
        NYFVGKHDFSAFTNAAHNDRVVNPVKVIFRFDVI+MG LVQLEVEGSGFLYRQVRNMVGLLVQIGKEA+PP+VVPKILAS+DRRELAKYASGVPPQGLCL
Subjt:  NYFVGKHDFSAFTNAAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRRELAKYASGVPPQGLCL

Query:  VSINYKEDHLKLPSDCPGTSFGRTRSVSKCKVPFY
        VSINYKEDHLKLPSDCPGTS GR RSVSKCK+PFY
Subjt:  VSINYKEDHLKLPSDCPGTSFGRTRSVSKCKVPFY

XP_038875517.1 tRNA pseudouridine synthase A 1 isoform X2 [Benincasa hispida]4.1e-17389.55Show/hide
Query:  MRCWAVGSPVLPPISLPLSPIIPSPNGASSSSSRGFPNAEDDASYIKEPSFPCFKWRLLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKDLHL
        MRCWAVGSPVLPPISLPLSP IP PNGASSSSSRG PNAE D+S I  P FP FKWRLLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKDLHL
Subjt:  MRCWAVGSPVLPPISLPLSPIIPSPNGASSSSSRGFPNAEDDASYIKEPSFPCFKWRLLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKDLHL

Query:  VGASRTDKGVHAWGQVAHFVTPFNYDSLESIHAALNGLLPVDIRVREMSPAVPDFHARFSTLSKVYHYKIYSGTIMDPFQRCYSYHCVYKLNYAAMKEAA
        VGASRTDKGVHAWGQVAHF+TPFNYDSLES+HAALNGLLPVDIRVRE+SPA PDFHARFSTLSKVYHYKIY+G I+DPFQRCY+YHCVYKLNYAAMKEAA
Subjt:  VGASRTDKGVHAWGQVAHFVTPFNYDSLESIHAALNGLLPVDIRVREMSPAVPDFHARFSTLSKVYHYKIYSGTIMDPFQRCYSYHCVYKLNYAAMKEAA

Query:  NYFVGKHDFSAFTNAAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRRELAKYASGVPPQGLCL
        NYFVGKHDFSAFTNAAHNDRVVNPVK          G LVQLEVEGSGFLYRQVRNMVGLLVQIGKEA+PP+VVPKILAS+DRRELAKYASGVPPQGLCL
Subjt:  NYFVGKHDFSAFTNAAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRRELAKYASGVPPQGLCL

Query:  VSINYKEDHLKLPSDCPGTSFGRTRSVSKCKVPFY
        VSINYKEDHLKLPSDCPGTS GR RSVSKCK+PFY
Subjt:  VSINYKEDHLKLPSDCPGTSFGRTRSVSKCKVPFY

TrEMBL top hitse value%identityAlignment
A0A0A0KB67 tRNA pseudouridine synthase1.1e-18799.38Show/hide
Query:  MRCWAVGSPVLPPISLPLSPIIPSPNGASSSSSRGFPNAEDDASYIKEPSFPCFKWRLLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKDLHL
        MRCWAVGSPVLPPISLPLSPIIPSPNGASSSSSRGFPNAEDDASYIKEPSFPCFKWRLLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKDLHL
Subjt:  MRCWAVGSPVLPPISLPLSPIIPSPNGASSSSSRGFPNAEDDASYIKEPSFPCFKWRLLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKDLHL

Query:  VGASRTDKGVHAWGQVAHFVTPFNYDSLESIHAALNGLLPVDIRVREMSPAVPDFHARFSTLSKVYHYKIYSGTIMDPFQRCYSYHCVYKLNYAAMKEAA
        VGASRTDKGVHAWGQVAHFVTPFNYDSLES+HAALNGLLPVDIRVREMSPAVPDFHARFSTLSKVYHYKIYSGTIMDPFQRCY+YHCVYKLNYAAMKEAA
Subjt:  VGASRTDKGVHAWGQVAHFVTPFNYDSLESIHAALNGLLPVDIRVREMSPAVPDFHARFSTLSKVYHYKIYSGTIMDPFQRCYSYHCVYKLNYAAMKEAA

Query:  NYFVGKHDFSAFTNAAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRRELAKYASGVPPQGLCL
        NYFVGKHDFSAFTNAAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRRELAKYASGVPPQGLCL
Subjt:  NYFVGKHDFSAFTNAAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRRELAKYASGVPPQGLCL

Query:  VSINYKEDHLKLPSDCPGTSFG
        VSINYKEDHLKLPSDCPGTSFG
Subjt:  VSINYKEDHLKLPSDCPGTSFG

A0A1S3C7L6 tRNA pseudouridine synthase1.8e-18795.52Show/hide
Query:  MRCWAVGSPVLPPISLPLSPIIPSPNGASSSSSRGFPNAEDDASYIKEPSFPCFKWRLLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKDLHL
        MRCWAVGSPVLPPISLP SPIIPSPNGASSSSSRGFPNAE D+SYI EP FP FKWRLLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKDLHL
Subjt:  MRCWAVGSPVLPPISLPLSPIIPSPNGASSSSSRGFPNAEDDASYIKEPSFPCFKWRLLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKDLHL

Query:  VGASRTDKGVHAWGQVAHFVTPFNYDSLESIHAALNGLLPVDIRVREMSPAVPDFHARFSTLSKVYHYKIYSGTIMDPFQRCYSYHCVYKLNYAAMKEAA
        VGASRTDKGVHAWGQVAHFVTPFNYDSLES+HAALNGLLPVDIRVREMSPA PDFHARFSTLSKVYHYKIY+GTIMDPFQRCY+YHCVYKLNYAAMKEAA
Subjt:  VGASRTDKGVHAWGQVAHFVTPFNYDSLESIHAALNGLLPVDIRVREMSPAVPDFHARFSTLSKVYHYKIYSGTIMDPFQRCYSYHCVYKLNYAAMKEAA

Query:  NYFVGKHDFSAFTNAAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRRELAKYASGVPPQGLCL
        NYFVGKHDFSAFTNAAHN+RVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDR+ELAKYASGVPPQGLCL
Subjt:  NYFVGKHDFSAFTNAAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRRELAKYASGVPPQGLCL

Query:  VSINYKEDHLKLPSDCPGTSFGRTRSVSKCKVPFY
        VSINYKEDHLKLPSDCPGTS GR+RSV KCKVPFY
Subjt:  VSINYKEDHLKLPSDCPGTSFGRTRSVSKCKVPFY

A0A5D3BY40 Protein TRIGALACTOSYLDIACYLGLYCEROL 46.4e-18095.96Show/hide
Query:  MRCWAVGSPVLPPISLPLSPIIPSPNGASSSSSRGFPNAEDDASYIKEPSFPCFKWRLLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKDLHL
        MRCWAVGSPVLPPISLP SPIIPSPNGASSSSSRGFPNAE D+SYI EP FP FKWRLLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKDLHL
Subjt:  MRCWAVGSPVLPPISLPLSPIIPSPNGASSSSSRGFPNAEDDASYIKEPSFPCFKWRLLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKDLHL

Query:  VGASRTDKGVHAWGQVAHFVTPFNYDSLESIHAALNGLLPVDIRVREMSPAVPDFHARFSTLSKVYHYKIYSGTIMDPFQRCYSYHCVYKLNYAAMKEAA
        VGASRTDKGVHAWGQVAHFVTPFNYDSLES+HAALNGLLPVDIRVREMSPA PDFHARFSTLSKVYHYKIY+GTIMDPFQRCY+YHCVYKLNYAAMKEAA
Subjt:  VGASRTDKGVHAWGQVAHFVTPFNYDSLESIHAALNGLLPVDIRVREMSPAVPDFHARFSTLSKVYHYKIYSGTIMDPFQRCYSYHCVYKLNYAAMKEAA

Query:  NYFVGKHDFSAFTNAAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRRELAKYASGVPPQGLCL
        NYFVGKHDFSAFTNAAHN+RVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDR+ELAKYASGVPPQGLCL
Subjt:  NYFVGKHDFSAFTNAAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRRELAKYASGVPPQGLCL

Query:  VSINYKEDHLKLPSDCPGTSFG
        VSINYKEDHLKLPSDCPGTS G
Subjt:  VSINYKEDHLKLPSDCPGTSFG

A0A6J1L0L1 tRNA pseudouridine synthase2.1e-16784.78Show/hide
Query:  MRCWAVGSPVLPPISLPLSPIIPSPNGASSSSSRGFPNAEDDASYIKEPSFPCFKWRLLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKDLHL
        M CWAVGS VLP +  PLSP IPS  G  SS+ RGFPN+E D+S + EP FP FKWRL+IAYDGTRYAGWQYQRSPPTIQCLIEEAL GAT+LERKDLHL
Subjt:  MRCWAVGSPVLPPISLPLSPIIPSPNGASSSSSRGFPNAEDDASYIKEPSFPCFKWRLLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKDLHL

Query:  VGASRTDKGVHAWGQVAHFVTPFNYDSLESIHAALNGLLPVDIRVREMSPAVPDFHARFSTLSKVYHYKIYSGTIMDPFQRCYSYHCVYKLNYAAMKEAA
        VGASRTDKGVHAWGQVAHF+TPFNYDSL+ IHAALNGLLP DIRVRE+SPAVPDFHARFSTLSKVYHYKIY+  I+DPFQRCY+YHCVYKLNYAAMKEAA
Subjt:  VGASRTDKGVHAWGQVAHFVTPFNYDSLESIHAALNGLLPVDIRVREMSPAVPDFHARFSTLSKVYHYKIYSGTIMDPFQRCYSYHCVYKLNYAAMKEAA

Query:  NYFVGKHDFSAFTNAAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRRELAKYASGVPPQGLCL
        NYFVGKHDFSAF N AHNDRVVNPVKVIFRFDVIEMGAL+QLEVEGSGFLYRQVRNMV LL+QIGKEA+PP+VVPKILASRDR+ LAKY + +PPQGLCL
Subjt:  NYFVGKHDFSAFTNAAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRRELAKYASGVPPQGLCL

Query:  VSINYKEDHLKLPSDCPGTSFGRTRSVSKCKVPFY
        V INYKEDHLKLPSDCPGTSFGR+ SVSKCK+PFY
Subjt:  VSINYKEDHLKLPSDCPGTSFGRTRSVSKCKVPFY

A0A6J1L2M8 tRNA pseudouridine synthase6.8e-16684.27Show/hide
Query:  MRCWAVGSPVLPPISLPLSPIIPSPNGASSSSSRGFP--NAEDDASYIKEPSFPCFKWRLLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKDL
        M CWAVGS VLP +  PLSP IPS  G  SS+ RGFP  N+E D+S + EP FP FKWRL+IAYDGTRYAGWQYQRSPPTIQCLIEEAL GAT+LERKDL
Subjt:  MRCWAVGSPVLPPISLPLSPIIPSPNGASSSSSRGFP--NAEDDASYIKEPSFPCFKWRLLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKDL

Query:  HLVGASRTDKGVHAWGQVAHFVTPFNYDSLESIHAALNGLLPVDIRVREMSPAVPDFHARFSTLSKVYHYKIYSGTIMDPFQRCYSYHCVYKLNYAAMKE
        HLVGASRTDKGVHAWGQVAHF+TPFNYDSL+ IHAALNGLLP DIRVRE+SPAVPDFHARFSTLSKVYHYKIY+  I+DPFQRCY+YHCVYKLNYAAMKE
Subjt:  HLVGASRTDKGVHAWGQVAHFVTPFNYDSLESIHAALNGLLPVDIRVREMSPAVPDFHARFSTLSKVYHYKIYSGTIMDPFQRCYSYHCVYKLNYAAMKE

Query:  AANYFVGKHDFSAFTNAAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRRELAKYASGVPPQGL
        AANYFVGKHDFSAF N AHNDRVVNPVKVIFRFDVIEMGAL+QLEVEGSGFLYRQVRNMV LL+QIGKEA+PP+VVPKILASRDR+ LAKY + +PPQGL
Subjt:  AANYFVGKHDFSAFTNAAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRRELAKYASGVPPQGL

Query:  CLVSINYKEDHLKLPSDCPGTSFGRTRSVSKCKVPFY
        CLV INYKEDHLKLPSDCPGTSFGR+ SVSKCK+PFY
Subjt:  CLVSINYKEDHLKLPSDCPGTSFGRTRSVSKCKVPFY

SwissProt top hitse value%identityAlignment
A4J151 tRNA pseudouridine synthase A2.9e-4441.04Show/hide
Query:  RLLIAYDGTRYAGWQYQRSP--PTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHAWGQVAHFVTPFNYDSLESIHAALNGLLPVDIRVREMSPAVPD
        +L +AYDGT Y G+Q QR     TIQ  +E+AL   + + +  + ++GA RTD GVHA GQV +F +       E    ALN LLP DI+V +      D
Subjt:  RLLIAYDGTRYAGWQYQRSP--PTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHAWGQVAHFVTPFNYDSLESIHAALNGLLPVDIRVREMSPAVPD

Query:  FHARFSTLSKVYHYKIYSGTIMDPFQRCYSYHCVYKLNYAAMKEAANYFVGKHDFSAFTNAAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQV
        FHARFS ++K Y Y IY   +M PF R Y YH   +L+  AM+E A Y +G +DF +F   A    V + ++ I+R D+IE   ++ L + G+GFLY  V
Subjt:  FHARFSTLSKVYHYKIYSGTIMDPFQRCYSYHCVYKLNYAAMKEAANYFVGKHDFSAFTNAAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQV

Query:  RNMVGLLVQIGKEALPPEVVPKILASRDRRELAKYASGVPPQGLCLVSINY
        R + G L+ IG   + PE + KI+ S++R      A   PPQGLCL+ + Y
Subjt:  RNMVGLLVQIGKEALPPEVVPKILASRDRRELAKYASGVPPQGLCLVSINY

B1I1B5 tRNA pseudouridine synthase A2.8e-4744.22Show/hide
Query:  RLLIAYDGTRYAGWQYQRSP--PTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHAWGQVAHFVTPFNYDSLESIHAALNGLLPVDIRVREMSPAVPD
        RL +AYDGT Y G+Q Q     PTIQ  +E  L    +L    L + GASRTD GVHA GQV +FVT       E I AALNG+LP DI   +      D
Subjt:  RLLIAYDGTRYAGWQYQRSP--PTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHAWGQVAHFVTPFNYDSLESIHAALNGLLPVDIRVREMSPAVPD

Query:  FHARFSTLSKVYHYKIYSGTIMDPFQRCYSYHCVYKLNYAAMKEAANYFVGKHDFSAFTNAAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQV
        FHAR+S ++K Y Y +Y+  +  PFQR YS H    L+  AM+ AA + +G+HDFS F  A     V + V+ + R D+     LV+L     GFLY  V
Subjt:  FHARFSTLSKVYHYKIYSGTIMDPFQRCYSYHCVYKLNYAAMKEAANYFVGKHDFSAFTNAAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQV

Query:  RNMVGLLVQIGKEALPPEVVPKILASRDRRELAKYASGVPPQGLCLVSINY
        R M G L+++G E L PE +P I+AS DR   A+    VPP GLCL  + Y
Subjt:  RNMVGLLVQIGKEALPPEVVPKILASRDRRELAKYASGVPPQGLCLVSINY

Q3A3B5 tRNA pseudouridine synthase A1.9e-4340.46Show/hide
Query:  RLLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHAWGQVAHFVTPFNYDSLESIHAALNGLLPVDIRVREMSPAVPDFH
        RL+I YDGT Y GWQ Q +  ++Q ++EEAL    K+      LV + RTD GVHA G VAHFVTP     + +    +N  LP  I VR+ +    DFH
Subjt:  RLLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHAWGQVAHFVTPFNYDSLESIHAALNGLLPVDIRVREMSPAVPDFH

Query:  ARFSTLSKVYHYKIYSGTIMDPFQRCYSYHCVYKLNYAAMKEAANYFVGKHDFSAFTNAAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRN
        AR+S + K Y Y IY   +  P    +S+H    L+  AM++AA   VG+HDF+AF  +    R    V+ +F  D+++    V ++V GSGFL   VR 
Subjt:  ARFSTLSKVYHYKIYSGTIMDPFQRCYSYHCVYKLNYAAMKEAANYFVGKHDFSAFTNAAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRN

Query:  MVGLLVQIGKEALPPEVVPKILASRDRRELAKYASGV--PPQGLCLVSINYKEDHLKLPSDC
        MVG LV++G+ A PPE V  +LA   R++     SG+  P QGLCL+ + Y       P DC
Subjt:  MVGLLVQIGKEALPPEVVPKILASRDRRELAKYASGV--PPQGLCLVSINYKEDHLKLPSDC

Q6MEE7 tRNA pseudouridine synthase A 14.7e-5542.75Show/hide
Query:  WRLLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHAWGQVAHFVTPFNYDSLESIHAALNGLLPVDIRVREMSPAVPDF
        ++L IAYDGT Y+GWQ Q +  +IQ  I+EAL     L+++ + LVG+ RTD GVHA GQVAHF    +Y  L  +H +LNGLLP DIR++ + P  P F
Subjt:  WRLLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHAWGQVAHFVTPFNYDSLESIHAALNGLLPVDIRVREMSPAVPDF

Query:  HARFSTLSKVYHYKIYSGTIMDPFQRCYSYHCVYKLNYAAMKEAANYFVGKHDFSAFTNAAHNDRVV-NPVKVIFRFDVIEMGALVQLEVEGSGFLYRQV
        H+++S + K YHY ++   +MDPFQR YS+H   K++   +K+AA  F G HDF++F N AH      NPV+ ++R D+      ++LE EG GFLY+ V
Subjt:  HARFSTLSKVYHYKIYSGTIMDPFQRCYSYHCVYKLNYAAMKEAANYFVGKHDFSAFTNAAHNDRVV-NPVKVIFRFDVIEMGALVQLEVEGSGFLYRQV

Query:  RNMVGLLVQIGKEALPPEVVPKILASRDRRELAKYASGVPPQGLCLVSINYKEDH
        RN+VG L+ +       E + +I A+++RR+ +  A   PP+GL L+ + Y+ ++
Subjt:  RNMVGLLVQIGKEALPPEVVPKILASRDRRELAKYASGVPPQGLCLVSINYKEDH

Q8R7Y7 tRNA pseudouridine synthase A5.2e-4643.95Show/hide
Query:  LLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHAWGQVAHFVTPFNYDSLESIHAALNGLLPVDIRVREMSPAVPDFHA
        L+I YDGT Y GWQYQ++  T+Q ++E+A+    K+  + ++L+G+SRTD GVHA  QVA+F T       E +  ALN +LP D+ V +       FHA
Subjt:  LLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHAWGQVAHFVTPFNYDSLESIHAALNGLLPVDIRVREMSPAVPDFHA

Query:  RFSTLSKVYHYKIYSGTIMDPFQRCYSYHCVYKLNYAAMKEAANYFVGKHDFSAFTNAAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNM
        R+S  SK Y Y I +     P  R Y +H  Y L+  AMK+AA +F G HDFSAF   A  ++ VNPVK IF   V + G L+++EVE  GFLY  VR +
Subjt:  RFSTLSKVYHYKIYSGTIMDPFQRCYSYHCVYKLNYAAMKEAANYFVGKHDFSAFTNAAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNM

Query:  VGLLVQIGKEALPPEVVPKILASRDRRELAKYASGVPPQGLCLVSINY
        VG LV +G   +    +P I+ S+DR    K     PPQGL LV I Y
Subjt:  VGLLVQIGKEALPPEVVPKILASRDRRELAKYASGVPPQGLCLVSINY

Arabidopsis top hitse value%identityAlignment
AT1G34150.1 Pseudouridine synthase family protein6.4e-1529.81Show/hide
Query:  LLIAYDGTRYAGWQYQ-RSPPTIQCLIEEALIGATKL--ERKDLHLVGASRTDKGVHAWGQV------AHFVTPFNYDSLESIHA------------ALN
        L I Y G R+ G+  + +  P+I+  + +AL     L  ++KD       RTDKGV + GQV      +   +P   DS   ++              LN
Subjt:  LLIAYDGTRYAGWQYQ-RSPPTIQCLIEEALIGATKL--ERKDLHLVGASRTDKGVHAWGQV------AHFVTPFNYDSLESIHA------------ALN

Query:  GLLPVDIRVREMSPAVPDFHARFSTLSKVYHYKIYSGTIMDPFQRCYSYHCVYKLNYAAMKEAANYFVGKHDFSAF-----TNAAHNDRVVNPVKVIFRF
          LP DIRV   SPA  DFHARFS  ++ Y Y  +                   LN +AM  A   F+G+HDF  F      N     R V   +V    
Subjt:  GLLPVDIRVREMSPAVPDFHARFSTLSKVYHYKIYSGTIMDPFQRCYSYHCVYKLNYAAMKEAANYFVGKHDFSAF-----TNAAHNDRVVNPVKVIFRF

Query:  DVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRRELAKY--ASGVP
        +  E   L    + GS FL+ Q+R MV +L  IG+     +V+  +L ++      +Y  AS +P
Subjt:  DVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRRELAKY--ASGVP

AT3G06950.1 Pseudouridine synthase family protein8.6e-12164.74Show/hide
Query:  SPVLPPISLPLSPIIPSPNGASSSSSRGFPNAEDDASYIKEPSFPCFKWRLLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKDLHLVGASRTD
        +P LPP SL  +  + SP   S ++        D  +Y         KWRL+IAYDGTR+AGWQYQ SPPTIQ ++E+ALI  T+L RK+L L+GA RTD
Subjt:  SPVLPPISLPLSPIIPSPNGASSSSSRGFPNAEDDASYIKEPSFPCFKWRLLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKDLHLVGASRTD

Query:  KGVHAWGQVAHFVTPFNYDSLESIHAALNGLLPVDIRVREMSPAVPDFHARFSTLSKVYHYKIYSGTIMDPFQRCYSYHCVYKLNYAAMKEAANYFVGKH
         GVHAWGQVAHFVTPFNY SL+S HAALNGLLP DIRVRE+S AVP+FHARFS  SKVY Y+IY+ T MDPFQR ++YHC YKLN + M+EAAN FVGKH
Subjt:  KGVHAWGQVAHFVTPFNYDSLESIHAALNGLLPVDIRVREMSPAVPDFHARFSTLSKVYHYKIYSGTIMDPFQRCYSYHCVYKLNYAAMKEAANYFVGKH

Query:  DFSAFTNAAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRRELAKYAS-GVPPQGLCLVSINYK
        DFSAF NA   D V +P+K I RFDVI+MG+L+QLEVEGSGFLYRQVRNMV LL+QIGKEAL  ++VP IL ++DRR LAKY S    P GLCLVS+ YK
Subjt:  DFSAFTNAAHNDRVVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRRELAKYAS-GVPPQGLCLVSINYK

Query:  EDHLKLPSDCPGTSFGRTRSVSKCKVPFY
        EDHLKLP DCP TS GR  +++KCK+PFY
Subjt:  EDHLKLPSDCPGTSFGRTRSVSKCKVPFY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGTGCTGGGCGGTGGGTTCGCCTGTTCTTCCTCCAATTTCCCTTCCCCTTTCACCAATCATTCCATCTCCAAATGGCGCTTCATCTTCCTCCAGTCGTGGATTCCC
GAATGCGGAGGATGATGCCTCTTATATCAAAGAGCCTTCTTTCCCATGCTTCAAATGGCGGTTGCTCATCGCTTATGACGGTACTCGATATGCAGGCTGGCAATATCAGA
GGTCACCACCCACTATCCAGTGCCTCATTGAAGAAGCCTTGATTGGAGCAACAAAGCTTGAAAGGAAGGATCTTCATTTAGTTGGTGCAAGCAGAACAGATAAAGGAGTA
CATGCCTGGGGTCAGGTGGCTCACTTTGTTACGCCATTTAACTACGATAGCTTGGAAAGCATTCATGCTGCACTGAATGGCCTTCTTCCTGTGGATATAAGAGTTCGAGA
GATGAGTCCTGCTGTACCCGATTTTCATGCTCGGTTTTCTACGTTAAGCAAGGTTTATCACTACAAGATATATAGTGGCACAATCATGGATCCATTTCAGCGTTGCTACT
CTTACCACTGTGTTTATAAACTCAACTATGCAGCCATGAAAGAAGCTGCAAATTATTTCGTCGGAAAGCATGATTTTTCTGCTTTTACGAATGCAGCTCATAACGATCGA
GTGGTAAATCCAGTGAAGGTCATTTTCCGTTTTGATGTGATAGAAATGGGAGCTCTTGTGCAGCTAGAAGTTGAGGGTTCTGGGTTCTTATATAGACAAGTTCGGAATAT
GGTTGGCTTGTTGGTTCAAATTGGAAAGGAAGCACTTCCTCCTGAGGTTGTTCCTAAGATTTTGGCATCTCGAGATCGCAGAGAGCTTGCTAAGTATGCTTCGGGCGTTC
CTCCCCAGGGACTGTGTCTTGTGAGTATTAATTATAAAGAGGACCATTTAAAGCTTCCATCCGATTGCCCTGGGACTAGTTTTGGTAGGACTCGTAGTGTGAGCAAATGT
AAAGTCCCTTTTTATTGA
mRNA sequenceShow/hide mRNA sequence
TAACTATCTTCAATATTTGTATGTTTCTTAGTTCTTAGCTTGATTGTTAAACCCGGTTGATGAGAGATATCAAAATTGAATTTATAGAAAGGTGAGGGCTTCCAAGAGTT
TATGCAAATATCATCAACTGAAAGCATGATTCTGTATCCTATAAAAAGAGAGAAATTTAGTCATAGGATATTTTGTTTTCATATATATAATATGTAAAATTTATGAGTTT
TGAATTTTCACCCACATATTGTCACCAAAAGGGAAATCTCTGAATTGAAAACTCAACGGATGAGGTGCTGGGCGGTGGGTTCGCCTGTTCTTCCTCCAATTTCCCTTCCC
CTTTCACCAATCATTCCATCTCCAAATGGCGCTTCATCTTCCTCCAGTCGTGGATTCCCGAATGCGGAGGATGATGCCTCTTATATCAAAGAGCCTTCTTTCCCATGCTT
CAAATGGCGGTTGCTCATCGCTTATGACGGTACTCGATATGCAGGCTGGCAATATCAGAGGTCACCACCCACTATCCAGTGCCTCATTGAAGAAGCCTTGATTGGAGCAA
CAAAGCTTGAAAGGAAGGATCTTCATTTAGTTGGTGCAAGCAGAACAGATAAAGGAGTACATGCCTGGGGTCAGGTGGCTCACTTTGTTACGCCATTTAACTACGATAGC
TTGGAAAGCATTCATGCTGCACTGAATGGCCTTCTTCCTGTGGATATAAGAGTTCGAGAGATGAGTCCTGCTGTACCCGATTTTCATGCTCGGTTTTCTACGTTAAGCAA
GGTTTATCACTACAAGATATATAGTGGCACAATCATGGATCCATTTCAGCGTTGCTACTCTTACCACTGTGTTTATAAACTCAACTATGCAGCCATGAAAGAAGCTGCAA
ATTATTTCGTCGGAAAGCATGATTTTTCTGCTTTTACGAATGCAGCTCATAACGATCGAGTGGTAAATCCAGTGAAGGTCATTTTCCGTTTTGATGTGATAGAAATGGGA
GCTCTTGTGCAGCTAGAAGTTGAGGGTTCTGGGTTCTTATATAGACAAGTTCGGAATATGGTTGGCTTGTTGGTTCAAATTGGAAAGGAAGCACTTCCTCCTGAGGTTGT
TCCTAAGATTTTGGCATCTCGAGATCGCAGAGAGCTTGCTAAGTATGCTTCGGGCGTTCCTCCCCAGGGACTGTGTCTTGTGAGTATTAATTATAAAGAGGACCATTTAA
AGCTTCCATCCGATTGCCCTGGGACTAGTTTTGGTAGGACTCGTAGTGTGAGCAAATGTAAAGTCCCTTTTTATTGAATCAATCTTGCACTTATGCCATGAGAATAATCT
GCGTTGCAGGGTGTCCCAACAACTTAGGAGGCCGAGATATTATTAGATAAGCAGTGTAGTTTAGTTAACAAAATTTTGGATCAGTTAGTCTTTGTTAATTTATGATTTAG
TATATTTATGTTAGTTTGTTATTTGTTTTTTCTTTTTCTTTTCTGTGGTAAGCCTATAGCCACTCTTAGTACACTGTATTGGAACTCTAGAGACTTTGAACATTATTATT
GCAATACTTTGTATTTTAGAAGGATTTCT
Protein sequenceShow/hide protein sequence
MRCWAVGSPVLPPISLPLSPIIPSPNGASSSSSRGFPNAEDDASYIKEPSFPCFKWRLLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKDLHLVGASRTDKGV
HAWGQVAHFVTPFNYDSLESIHAALNGLLPVDIRVREMSPAVPDFHARFSTLSKVYHYKIYSGTIMDPFQRCYSYHCVYKLNYAAMKEAANYFVGKHDFSAFTNAAHNDR
VVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRRELAKYASGVPPQGLCLVSINYKEDHLKLPSDCPGTSFGRTRSVSKC
KVPFY