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CSPI06G00420 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G00420
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionshootin-1-like
Genome locationChr6:322540..326160
RNA-Seq ExpressionCSPI06G00420
SyntenyCSPI06G00420
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575171.1 hypothetical protein SDJN03_25810, partial [Cucurbita argyrosperma subsp. sororia]2.2e-7274.63Show/hide
Query:  MEETKA--------TTAPSQ---TLPPLPPKLKKRPFDRNAYIQFTKMRTVIRDLRPHFLEVIKTPDFRNCKAATEIRERIKVLQDVYTMMMAATSETLY
        MEE KA        +TAPSQ    LPPLPPK KKRP DRNAYIQ+TKMR VIRDLRPHFLEV+KTP+FRNCKAA EIRERIK+LQD+Y MMMA TSE+LY
Subjt:  MEETKA--------TTAPSQ---TLPPLPPKLKKRPFDRNAYIQFTKMRTVIRDLRPHFLEVIKTPDFRNCKAATEIRERIKVLQDVYTMMMAATSETLY

Query:  IEKTSSNVLDG----------LAREQHHDGNLGDKSSTKSYESNNPSSNAPEKQRANDGQISGSYVVGGSAFGWNFIAFTGTEPVYYGITKEVFREKNPI
        IEKT SNVLDG           +REQHHDG  G KSSTKSYESN+PSS+APEKQ ANDGQ SG+Y+VGGSAFGWNFIAFTGTEPVYYG+TKE FR+KNPI
Subjt:  IEKTSSNVLDG----------LAREQHHDGNLGDKSSTKSYESNNPSSNAPEKQRANDGQISGSYVVGGSAFGWNFIAFTGTEPVYYGITKEVFREKNPI

Query:  DSSES
         SSES
Subjt:  DSSES

XP_004138508.1 uncharacterized protein LOC101203384 [Cucumis sativus]5.9e-97100Show/hide
Query:  MEETKATTAPSQTLPPLPPKLKKRPFDRNAYIQFTKMRTVIRDLRPHFLEVIKTPDFRNCKAATEIRERIKVLQDVYTMMMAATSETLYIEKTSSNVLDG
        MEETKATTAPSQTLPPLPPKLKKRPFDRNAYIQFTKMRTVIRDLRPHFLEVIKTPDFRNCKAATEIRERIKVLQDVYTMMMAATSETLYIEKTSSNVLDG
Subjt:  MEETKATTAPSQTLPPLPPKLKKRPFDRNAYIQFTKMRTVIRDLRPHFLEVIKTPDFRNCKAATEIRERIKVLQDVYTMMMAATSETLYIEKTSSNVLDG

Query:  LAREQHHDGNLGDKSSTKSYESNNPSSNAPEKQRANDGQISGSYVVGGSAFGWNFIAFTGTEPVYYGITKEVFREKNPIDSSES
        LAREQHHDGNLGDKSSTKSYESNNPSSNAPEKQRANDGQISGSYVVGGSAFGWNFIAFTGTEPVYYGITKEVFREKNPIDSSES
Subjt:  LAREQHHDGNLGDKSSTKSYESNNPSSNAPEKQRANDGQISGSYVVGGSAFGWNFIAFTGTEPVYYGITKEVFREKNPIDSSES

XP_008458259.1 PREDICTED: uncharacterized protein LOC103497729 [Cucumis melo]9.4e-8790.96Show/hide
Query:  MEETKA----TTAPSQTLPPLPPKLKKRPFDRNAYIQFTKMRTVIRDLRPHFLEVIKTPDFRNCKAATEIRERIKVLQDVYTMMMAATSETLYIEKTSSN
        MEETKA    TTAPSQTLPPLPPKLKKRP DRNAY+QFTKMR VIRDLRPHFLEV+KTPDFRNCKAATEIRERIKVLQD+Y  MM+ATSETLYIEKT  N
Subjt:  MEETKA----TTAPSQTLPPLPPKLKKRPFDRNAYIQFTKMRTVIRDLRPHFLEVIKTPDFRNCKAATEIRERIKVLQDVYTMMMAATSETLYIEKTSSN

Query:  VLDGLAREQHHDGNLGDKSSTKSYESNNPSSNAPEKQRANDGQISGSYVVGGSAFGWNFIAFTGTEPVYYGITKEVFREKNPIDSSES
        VLDGLAREQHHDG LGDKSSTKSYESNNPSS APEKQRANDG ISGSYVVGGSAFGWNFIAFTGTEPVYYGITKEVFREKNPIDSSES
Subjt:  VLDGLAREQHHDGNLGDKSSTKSYESNNPSSNAPEKQRANDGQISGSYVVGGSAFGWNFIAFTGTEPVYYGITKEVFREKNPIDSSES

XP_022959506.1 uncharacterized protein LOC111460466 [Cucurbita moschata]8.5e-7274.15Show/hide
Query:  MEETKA--------TTAPSQ---TLPPLPPKLKKRPFDRNAYIQFTKMRTVIRDLRPHFLEVIKTPDFRNCKAATEIRERIKVLQDVYTMMMAATSETLY
        MEE KA        +TAPSQ    LPPLPPK KKRP DRNAYIQ+TKMR VIRDLRPHFLEV+KTP+FRNCKAA EIRERIK+LQD+Y MMMA TSE+LY
Subjt:  MEETKA--------TTAPSQ---TLPPLPPKLKKRPFDRNAYIQFTKMRTVIRDLRPHFLEVIKTPDFRNCKAATEIRERIKVLQDVYTMMMAATSETLY

Query:  IEKTSSNVLDG----------LAREQHHDGNLGDKSSTKSYESNNPSSNAPEKQRANDGQISGSYVVGGSAFGWNFIAFTGTEPVYYGITKEVFREKNPI
        IEKT SNVLDG           +REQHHDG  G KSSTKSYESN+PSS+APEK  ANDGQ SG+Y+VGGSAFGWNFIAFTGTEPVYYG+TKE FR+KNPI
Subjt:  IEKTSSNVLDG----------LAREQHHDGNLGDKSSTKSYESNNPSSNAPEKQRANDGQISGSYVVGGSAFGWNFIAFTGTEPVYYGITKEVFREKNPI

Query:  DSSES
         SSES
Subjt:  DSSES

XP_038874738.1 uncharacterized protein LOC120067276 [Benincasa hispida]1.7e-8080.58Show/hide
Query:  MEETKA------------TTAPSQTLPPLPPKLKKRPFDRNAYIQFTKMRTVIRDLRPHFLEVIKTPDFRNCKAATEIRERIKVLQDVYTMMMAATSETL
        MEETKA            +TAPSQTLPPLPPKLKKRP DRNAYIQ+TKMR VIRDLRPHFLEV+KTPDFRNCKAA EIRERIKVLQD+Y +MMA TSETL
Subjt:  MEETKA------------TTAPSQTLPPLPPKLKKRPFDRNAYIQFTKMRTVIRDLRPHFLEVIKTPDFRNCKAATEIRERIKVLQDVYTMMMAATSETL

Query:  YIEKTSSNVLDG----------LAREQHHDGNLGDKSSTKSYESNNPSSNAPEKQRANDGQISGSYVVGGSAFGWNFIAFTGTEPVYYGITKEVFREKNP
        YIEKT SNVLDG           +REQHHDG LGDKSSTKSYESNNPSS A EKQRANDGQISGSY+VGGSAFGWNFIAFTGTEPVYYGITKEVFREKNP
Subjt:  YIEKTSSNVLDG----------LAREQHHDGNLGDKSSTKSYESNNPSSNAPEKQRANDGQISGSYVVGGSAFGWNFIAFTGTEPVYYGITKEVFREKNP

Query:  IDSSES
        I SSES
Subjt:  IDSSES

TrEMBL top hitse value%identityAlignment
A0A0A0K7F0 Uncharacterized protein2.8e-97100Show/hide
Query:  MEETKATTAPSQTLPPLPPKLKKRPFDRNAYIQFTKMRTVIRDLRPHFLEVIKTPDFRNCKAATEIRERIKVLQDVYTMMMAATSETLYIEKTSSNVLDG
        MEETKATTAPSQTLPPLPPKLKKRPFDRNAYIQFTKMRTVIRDLRPHFLEVIKTPDFRNCKAATEIRERIKVLQDVYTMMMAATSETLYIEKTSSNVLDG
Subjt:  MEETKATTAPSQTLPPLPPKLKKRPFDRNAYIQFTKMRTVIRDLRPHFLEVIKTPDFRNCKAATEIRERIKVLQDVYTMMMAATSETLYIEKTSSNVLDG

Query:  LAREQHHDGNLGDKSSTKSYESNNPSSNAPEKQRANDGQISGSYVVGGSAFGWNFIAFTGTEPVYYGITKEVFREKNPIDSSES
        LAREQHHDGNLGDKSSTKSYESNNPSSNAPEKQRANDGQISGSYVVGGSAFGWNFIAFTGTEPVYYGITKEVFREKNPIDSSES
Subjt:  LAREQHHDGNLGDKSSTKSYESNNPSSNAPEKQRANDGQISGSYVVGGSAFGWNFIAFTGTEPVYYGITKEVFREKNPIDSSES

A0A1S3C7F7 uncharacterized protein LOC1034977294.5e-8790.96Show/hide
Query:  MEETKA----TTAPSQTLPPLPPKLKKRPFDRNAYIQFTKMRTVIRDLRPHFLEVIKTPDFRNCKAATEIRERIKVLQDVYTMMMAATSETLYIEKTSSN
        MEETKA    TTAPSQTLPPLPPKLKKRP DRNAY+QFTKMR VIRDLRPHFLEV+KTPDFRNCKAATEIRERIKVLQD+Y  MM+ATSETLYIEKT  N
Subjt:  MEETKA----TTAPSQTLPPLPPKLKKRPFDRNAYIQFTKMRTVIRDLRPHFLEVIKTPDFRNCKAATEIRERIKVLQDVYTMMMAATSETLYIEKTSSN

Query:  VLDGLAREQHHDGNLGDKSSTKSYESNNPSSNAPEKQRANDGQISGSYVVGGSAFGWNFIAFTGTEPVYYGITKEVFREKNPIDSSES
        VLDGLAREQHHDG LGDKSSTKSYESNNPSS APEKQRANDG ISGSYVVGGSAFGWNFIAFTGTEPVYYGITKEVFREKNPIDSSES
Subjt:  VLDGLAREQHHDGNLGDKSSTKSYESNNPSSNAPEKQRANDGQISGSYVVGGSAFGWNFIAFTGTEPVYYGITKEVFREKNPIDSSES

A0A6J1DSC5 uncharacterized protein LOC1110230726.6e-6265.28Show/hide
Query:  ETKATTAPSQTLPPLPPKLKKRPFDRNAYIQFTKMRTVIRDLRPHFLEVIKTPDFRNCKAATEIRERIKVLQDVYTMMMAATSETLYIEKTSSNVLDGLA
        +T A + P+Q LPPLPPK KKRP DR+ ++Q++KMR VI+DLRPHF+EV+K PDFRNCKAA EIRERIK+LQD+Y +MMA+T+ETLYIEKT +N+LDG +
Subjt:  ETKATTAPSQTLPPLPPKLKKRPFDRNAYIQFTKMRTVIRDLRPHFLEVIKTPDFRNCKAATEIRERIKVLQDVYTMMMAATSETLYIEKTSSNVLDGLA

Query:  -----------REQHHDGNLGDKSSTKSYESNNPSSNAPEKQRANDGQISGSYVVGGSAFGWNFIAFTGTEPVYYGITKEVFREKNPIDSSES
                   RE HHD  LGDKSS +SYE     SN  EKQR NDG  SG+Y+VGGSAFGWNFI F G EPVYYG+TKE +REKNPI SSES
Subjt:  -----------REQHHDGNLGDKSSTKSYESNNPSSNAPEKQRANDGQISGSYVVGGSAFGWNFIAFTGTEPVYYGITKEVFREKNPIDSSES

A0A6J1H517 uncharacterized protein LOC1114604664.1e-7274.15Show/hide
Query:  MEETKA--------TTAPSQ---TLPPLPPKLKKRPFDRNAYIQFTKMRTVIRDLRPHFLEVIKTPDFRNCKAATEIRERIKVLQDVYTMMMAATSETLY
        MEE KA        +TAPSQ    LPPLPPK KKRP DRNAYIQ+TKMR VIRDLRPHFLEV+KTP+FRNCKAA EIRERIK+LQD+Y MMMA TSE+LY
Subjt:  MEETKA--------TTAPSQ---TLPPLPPKLKKRPFDRNAYIQFTKMRTVIRDLRPHFLEVIKTPDFRNCKAATEIRERIKVLQDVYTMMMAATSETLY

Query:  IEKTSSNVLDG----------LAREQHHDGNLGDKSSTKSYESNNPSSNAPEKQRANDGQISGSYVVGGSAFGWNFIAFTGTEPVYYGITKEVFREKNPI
        IEKT SNVLDG           +REQHHDG  G KSSTKSYESN+PSS+APEK  ANDGQ SG+Y+VGGSAFGWNFIAFTGTEPVYYG+TKE FR+KNPI
Subjt:  IEKTSSNVLDG----------LAREQHHDGNLGDKSSTKSYESNNPSSNAPEKQRANDGQISGSYVVGGSAFGWNFIAFTGTEPVYYGITKEVFREKNPI

Query:  DSSES
         SSES
Subjt:  DSSES

A0A6J1KWG6 uncharacterized protein LOC1114993234.1e-7274.15Show/hide
Query:  MEETKA--------TTAPSQ---TLPPLPPKLKKRPFDRNAYIQFTKMRTVIRDLRPHFLEVIKTPDFRNCKAATEIRERIKVLQDVYTMMMAATSETLY
        MEE KA        +TAPSQ    LPPLPPK KKRP DRNAYIQ+TKMR VIRDLRPHFLEV+KTP+FRNCKAA EIRERIK+LQD+Y +MMA TSE+LY
Subjt:  MEETKA--------TTAPSQ---TLPPLPPKLKKRPFDRNAYIQFTKMRTVIRDLRPHFLEVIKTPDFRNCKAATEIRERIKVLQDVYTMMMAATSETLY

Query:  IEKTSSNVLDG----------LAREQHHDGNLGDKSSTKSYESNNPSSNAPEKQRANDGQISGSYVVGGSAFGWNFIAFTGTEPVYYGITKEVFREKNPI
        IEKT SNVLDG           +REQ+HDG  G KSSTKSYESN+PSS+APEKQ ANDGQ SG+Y+VGGSAFGWNFIAFTGTEPVYYG+TKE FREKNPI
Subjt:  IEKTSSNVLDG----------LAREQHHDGNLGDKSSTKSYESNNPSSNAPEKQRANDGQISGSYVVGGSAFGWNFIAFTGTEPVYYGITKEVFREKNPI

Query:  DSSES
         SSES
Subjt:  DSSES

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G01730.1 unknown protein4.3e-2136.61Show/hide
Query:  TAPSQTLPPLP-PKLKKRPFDRNAYIQ---FTKMRTVIRDLRPHFLEVIKTPDFRNCKAATEIRERIKVLQDVYTMMMAATSETLYIEKTSSNVLDGLAR
        TAP  T+   P  + +KR  + N  I+   + KMR +++DLRPH LEV++TPD RN KA  EI+E++K++  +Y  M+  + +    EKT+ +       
Subjt:  TAPSQTLPPLP-PKLKKRPFDRNAYIQ---FTKMRTVIRDLRPHFLEVIKTPDFRNCKAATEIRERIKVLQDVYTMMMAATSETLYIEKTSSNVLDGLAR

Query:  EQHHDGNLGDKSSTKSYESNNPSSNAPEKQRANDGQISGSYVVGGSAFGWNFIAF--TGTEPVYYGITKEVFREKNPIDSSES
            D     K++T +  + +   ++  ++ ++DG   G  VVGGSAFGWNFI     GTEPVY G++KE +R  +PI   E+
Subjt:  EQHHDGNLGDKSSTKSYESNNPSSNAPEKQRANDGQISGSYVVGGSAFGWNFIAF--TGTEPVYYGITKEVFREKNPIDSSES


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAAACCAAAGCAACCACAGCTCCATCTCAGACATTGCCTCCTCTTCCTCCCAAACTTAAGAAGCGCCCATTTGACAGAAATGCTTACATCCAATTTACAAAGAT
GCGCACCGTTATTAGAGATCTTCGACCTCATTTTCTCGAGGTTATCAAGACCCCTGACTTTCGCAATTGCAAGGCAGCTACTGAAATTCGAGAGAGAATAAAGGTTCTAC
AGGACGTGTATACAATGATGATGGCAGCAACTTCAGAAACTCTTTACATTGAGAAGACCAGTAGTAATGTGCTCGATGGTCTGGCTCGAGAACAACACCATGATGGTAAT
CTAGGGGACAAGTCATCTACAAAATCATATGAAAGTAATAACCCTTCAAGTAACGCCCCAGAAAAGCAGCGTGCGAATGATGGCCAGATATCTGGATCTTACGTTGTTGG
TGGATCGGCATTTGGCTGGAATTTTATTGCCTTCACAGGTACTGAACCGGTATACTATGGAATTACGAAGGAAGTATTTCGAGAAAAGAATCCCATTGATTCATCTGAAT
CATGA
mRNA sequenceShow/hide mRNA sequence
ACTTAATTAATTATAAGTTTTATGAAAGGGTAAGCTTAGCTTAAACAATTTCAAAGGTAATTTGGGGATTTCTACAATTTGTTGTCATCTCCTTCCTCAGGAAACCCTTA
TTCAGGATTCGAGAACCAGAATTTTTTTGAGGTTTCATTTTCCATGGAGGAAACCAAAGCAACCACAGCTCCATCTCAGACATTGCCTCCTCTTCCTCCCAAACTTAAGA
AGCGCCCATTTGACAGAAATGCTTACATCCAATTTACAAAGATGCGCACCGTTATTAGAGATCTTCGACCTCATTTTCTCGAGGTTATCAAGACCCCTGACTTTCGCAAT
TGCAAGGCAGCTACTGAAATTCGAGAGAGAATAAAGGTTCTACAGGACGTGTATACAATGATGATGGCAGCAACTTCAGAAACTCTTTACATTGAGAAGACCAGTAGTAA
TGTGCTCGATGGTCTGGCTCGAGAACAACACCATGATGGTAATCTAGGGGACAAGTCATCTACAAAATCATATGAAAGTAATAACCCTTCAAGTAACGCCCCAGAAAAGC
AGCGTGCGAATGATGGCCAGATATCTGGATCTTACGTTGTTGGTGGATCGGCATTTGGCTGGAATTTTATTGCCTTCACAGGTACTGAACCGGTATACTATGGAATTACG
AAGGAAGTATTTCGAGAAAAGAATCCCATTGATTCATCTGAATCATGATTTTGAAATTAGTATGCTAGGGAAGTGTTCTATTTTATCAGGACTTGAGATGAACATTCAAT
AGATGCAATAGCTTTCTATTTAGAATGTGAAATTGTGAATCTATAGTGTAGAAGTTCAAGTAATGAAGATATTAACACTGATGTTCCTTTATCTAATGCCTTCGATGTTT
AACATCTGGAAATGGTGTCTTTGTTGAACCAATTTCCAAGTTATGTAATTTTTCTTTCTGTACAAAATTGTTGCTGCTGAAACATAGTCATATTAATCTTCTGAAAGTCC
Protein sequenceShow/hide protein sequence
MEETKATTAPSQTLPPLPPKLKKRPFDRNAYIQFTKMRTVIRDLRPHFLEVIKTPDFRNCKAATEIRERIKVLQDVYTMMMAATSETLYIEKTSSNVLDGLAREQHHDGN
LGDKSSTKSYESNNPSSNAPEKQRANDGQISGSYVVGGSAFGWNFIAFTGTEPVYYGITKEVFREKNPIDSSES