CuGenDBv2

Gene ID	CSPI06G00460
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Protein TonB like
Genome location	Chr6:347107..349484
RNA-Seq Expression	CSPI06G00460
Synteny	CSPI06G00460
Gene Ontology terms	GO:0070072 - vacuolar proton-transporting V-type ATPase complex assembly (biological process) GO:0005789 - endoplasmic reticulum membrane (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR021013 - ATPase, vacuolar ER assembly factor, Vma12

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004138504.1 uncharacterized protein LOC101222938 [Cucumis sativus]

5.5e-104

99.51

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Query:  MINDHALPSGLLLSHTEAIRSFLTSASIDSQLSDELRQIASDLVSQRNIPYKLLRAIWFATESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLA
        MINDHALPSGL+LSHTEAIRSFLTSASIDSQLSDELRQIASDLVSQRNIPYKLLRAIWFATESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLA
Subjt:  MINDHALPSGLLLSHTEAIRSFLTSASIDSQLSDELRQIASDLVSQRNIPYKLLRAIWFATESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLA

Query:  DVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRSSNYDNRSSSSSRS
        DVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRSSNYDNRSSSSSRS
Subjt:  DVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRSSNYDNRSSSSSRS

Query:  KLKKSQ
        KLKKSQ
Subjt:  KLKKSQ

XP_008458236.1 PREDICTED: uncharacterized protein LOC103497719 [Cucumis melo]

1.0e-102

98.06

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Query:  MINDHALPSGLLLSHTEAIRSFLTSASIDSQLSDELRQIASDLVSQRNIPYKLLRAIWFATESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLA
        MINDH LPSGL+LSHTEAIRSFLTSASIDSQLSDELRQIASDL SQRNIPYKLLRAIWFATESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLA
Subjt:  MINDHALPSGLLLSHTEAIRSFLTSASIDSQLSDELRQIASDLVSQRNIPYKLLRAIWFATESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLA

Query:  DVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRSSNYDNRSSSSSRS
        DVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYL+GYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRSSNYDNRSSSSSRS
Subjt:  DVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRSSNYDNRSSSSSRS

Query:  KLKKSQ
        KLKKSQ
Subjt:  KLKKSQ

XP_022959366.1 uncharacterized protein LOC111460360 [Cucurbita moschata]

1.6e-95

91.26

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Query:  MINDHALPSGLLLSHTEAIRSFLTSASIDSQLSDELRQIASDLVSQRNIPYKLLRAIWFATESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLA
        MIND A PSGL+++HTEAIRSFLTSASIDS++S+ELRQ+AS+L SQ N+PYK LRAIWFATESSTRPDLLRLL GSEFVFTSPKPREKSEELKARLKKLA
Subjt:  MINDHALPSGLLLSHTEAIRSFLTSASIDSQLSDELRQIASDLVSQRNIPYKLLRAIWFATESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLA

Query:  DVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRSSNYDNRSSSSSRS
        DVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIR+S+YDNRSSSSSRS
Subjt:  DVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRSSNYDNRSSSSSRS

Query:  KLKKSQ
        KLKK+Q
Subjt:  KLKKSQ

XP_023548168.1 uncharacterized protein LOC111806888 [Cucurbita pepo subsp. pepo]

2.1e-95

90.78

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Query:  MINDHALPSGLLLSHTEAIRSFLTSASIDSQLSDELRQIASDLVSQRNIPYKLLRAIWFATESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLA
        MIND A PSGL+++HTEAIRSFLTSASIDS++S+ELRQ+AS+L SQ N+PYK LRAIWFATESSTRPDLLRLL GSEFVFTSPKPREKSEELKARLKKLA
Subjt:  MINDHALPSGLLLSHTEAIRSFLTSASIDSQLSDELRQIASDLVSQRNIPYKLLRAIWFATESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLA

Query:  DVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRSSNYDNRSSSSSRS
        DVAERKAYQELVKDIAPKKP+DEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIR+S+YDNRSSSSSRS
Subjt:  DVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRSSNYDNRSSSSSRS

Query:  KLKKSQ
        KLKK+Q
Subjt:  KLKKSQ

XP_038876067.1 uncharacterized protein LOC120068388 [Benincasa hispida]

3.8e-97

94.17

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Query:  MINDHALPSGLLLSHTEAIRSFLTSASIDSQLSDELRQIASDLVSQRNIPYKLLRAIWFATESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLA
        MINDH  PSGL+LS+TEAIRSFLTSASIDSQLSDELRQIASDL SQ+NIPYK LRAIWFA ESS RPDLLRLLAGSEFV TSPKPREKSEELKARLKKLA
Subjt:  MINDHALPSGLLLSHTEAIRSFLTSASIDSQLSDELRQIASDLVSQRNIPYKLLRAIWFATESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLA

Query:  DVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRSSNYDNRSSSSSRS
        DVAERKAYQELVKDIAPKKPI+EPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRSSNYDNRSSSSS S
Subjt:  DVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRSSNYDNRSSSSSRS

Query:  KLKKSQ
        KLKKSQ
Subjt:  KLKKSQ

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K7F5 Uncharacterized protein

2.7e-104

99.51

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Query:  MINDHALPSGLLLSHTEAIRSFLTSASIDSQLSDELRQIASDLVSQRNIPYKLLRAIWFATESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLA
        MINDHALPSGL+LSHTEAIRSFLTSASIDSQLSDELRQIASDLVSQRNIPYKLLRAIWFATESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLA
Subjt:  MINDHALPSGLLLSHTEAIRSFLTSASIDSQLSDELRQIASDLVSQRNIPYKLLRAIWFATESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLA

Query:  DVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRSSNYDNRSSSSSRS
        DVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRSSNYDNRSSSSSRS
Subjt:  DVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRSSNYDNRSSSSSRS

Query:  KLKKSQ
        KLKKSQ
Subjt:  KLKKSQ

A0A1S3C6X8 uncharacterized protein LOC103497719

5.1e-103

98.06

Show/hide

Query:  MINDHALPSGLLLSHTEAIRSFLTSASIDSQLSDELRQIASDLVSQRNIPYKLLRAIWFATESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLA
        MINDH LPSGL+LSHTEAIRSFLTSASIDSQLSDELRQIASDL SQRNIPYKLLRAIWFATESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLA
Subjt:  MINDHALPSGLLLSHTEAIRSFLTSASIDSQLSDELRQIASDLVSQRNIPYKLLRAIWFATESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLA

Query:  DVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRSSNYDNRSSSSSRS
        DVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYL+GYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRSSNYDNRSSSSSRS
Subjt:  DVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRSSNYDNRSSSSSRS

Query:  KLKKSQ
        KLKKSQ
Subjt:  KLKKSQ

A0A5D3BV73 Uncharacterized protein

5.1e-103

98.06

Show/hide

Query:  MINDHALPSGLLLSHTEAIRSFLTSASIDSQLSDELRQIASDLVSQRNIPYKLLRAIWFATESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLA
        MINDH LPSGL+LSHTEAIRSFLTSASIDSQLSDELRQIASDL SQRNIPYKLLRAIWFATESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLA
Subjt:  MINDHALPSGLLLSHTEAIRSFLTSASIDSQLSDELRQIASDLVSQRNIPYKLLRAIWFATESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLA

Query:  DVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRSSNYDNRSSSSSRS
        DVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYL+GYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRSSNYDNRSSSSSRS
Subjt:  DVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRSSNYDNRSSSSSRS

Query:  KLKKSQ
        KLKKSQ
Subjt:  KLKKSQ

A0A6J1H4N6 uncharacterized protein LOC111460360

7.8e-96

91.26

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Query:  MINDHALPSGLLLSHTEAIRSFLTSASIDSQLSDELRQIASDLVSQRNIPYKLLRAIWFATESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLA
        MIND A PSGL+++HTEAIRSFLTSASIDS++S+ELRQ+AS+L SQ N+PYK LRAIWFATESSTRPDLLRLL GSEFVFTSPKPREKSEELKARLKKLA
Subjt:  MINDHALPSGLLLSHTEAIRSFLTSASIDSQLSDELRQIASDLVSQRNIPYKLLRAIWFATESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLA

Query:  DVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRSSNYDNRSSSSSRS
        DVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIR+S+YDNRSSSSSRS
Subjt:  DVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRSSNYDNRSSSSSRS

Query:  KLKKSQ
        KLKK+Q
Subjt:  KLKKSQ

A0A6J1L0S3 uncharacterized protein LOC111499322

1.9e-94

89.81

Show/hide

Query:  MINDHALPSGLLLSHTEAIRSFLTSASIDSQLSDELRQIASDLVSQRNIPYKLLRAIWFATESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLA
        MIND A PSGL+++HTEAIR+FLTSASIDS++S+ELRQ+AS+L SQ N+PYK LRAIWFATESSTRPDLLRLL GSEFVFTSPKPREKSEELKARLK LA
Subjt:  MINDHALPSGLLLSHTEAIRSFLTSASIDSQLSDELRQIASDLVSQRNIPYKLLRAIWFATESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLA

Query:  DVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRSSNYDNRSSSSSRS
        DVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGY LFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIR+S+YDNRSSSSSRS
Subjt:  DVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRSSNYDNRSSSSSRS

Query:  KLKKSQ
        KLKK+Q
Subjt:  KLKKSQ

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G52980.1 CONTAINS InterPro DOMAIN/s: ATPase, vacuolar ER assembly factor, Vma12 (InterPro:IPR021013); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

4.0e-68

72.63

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Query:  SGLLLSHTEAIRSFLTSASIDSQLSDELRQIASDLVSQRNIPYKLLRAIWFATESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLADVAERKAY
        SGL+LS TE +RSFL  AS D +LSDELR IASDL S+  IPYKLLRAIW  ++ STRPDLL L +GS FVFTSPKPREKSEELK RL KL ++AERK Y
Subjt:  SGLLLSHTEAIRSFLTSASIDSQLSDELRQIASDLVSQRNIPYKLLRAIWFATESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLADVAERKAY

Query:  QELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRSSNYDNRSSSSS
         ELVKDI PKK ++EPFSSYKDQLGFGLHV L MFTGYLVGYA FRALF  +P +SAAGGILGLV  MLVETLLFII++S  D   SS S
Subjt:  QELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRSSNYDNRSSSSS

Sequences

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CDS sequence

Show/hide CDS sequence

ATGATCAACGACCACGCACTTCCCTCAGGTCTTCTTCTGTCTCACACCGAAGCAATTCGCTCCTTTCTCACCTCGGCGTCAATAGATTCACAGCTTTCTGACGAACTCCG
GCAGATTGCTTCAGATCTCGTTTCACAACGCAACATTCCGTATAAGCTGCTGAGAGCTATCTGGTTTGCTACGGAATCGTCCACACGGCCGGACTTGCTCCGTCTTTTGG
CTGGATCAGAGTTCGTCTTTACAAGCCCTAAACCCAGGGAGAAGAGTGAGGAGTTAAAGGCTAGACTGAAGAAGCTTGCAGATGTAGCAGAGAGGAAGGCCTATCAGGAA
CTAGTGAAAGATATTGCACCTAAGAAACCAATTGATGAGCCTTTCTCTTCCTACAAGGATCAGCTCGGATTCGGTCTACATGTCGTGTTGATAATGTTTACCGGCTATCT
TGTTGGGTATGCTTTATTCCGAGCATTGTTTAGGCATGATCCAATCATGAGTGCCGCTGGAGGTATCCTTGGATTAGTTTTTGGCATGCTCGTAGAAACACTTCTTTTCA
TCATTCGATCATCCAATTACGATAATCGGTCTTCATCATCTTCCCGTTCTAAGCTGAAGAAGAGTCAGTAG

mRNA sequence

Show/hide mRNA sequence

GTCTTTGTTCCAAACGTTTGTTAGTTAATGTTAAAATTGCTTCATTTACTTCCCCCTTGAAATCCATTTTTAGTTGCCTTGAGCGCTCGTCTTCCACCCGTCTCGTCGGC
GCCAACGATATCGCTACTCTCAAACTGGCACGACCCCTTTCTACGATGATCAACGACCACGCACTTCCCTCAGGTCTTCTTCTGTCTCACACCGAAGCAATTCGCTCCTT
TCTCACCTCGGCGTCAATAGATTCACAGCTTTCTGACGAACTCCGGCAGATTGCTTCAGATCTCGTTTCACAACGCAACATTCCGTATAAGCTGCTGAGAGCTATCTGGT
TTGCTACGGAATCGTCCACACGGCCGGACTTGCTCCGTCTTTTGGCTGGATCAGAGTTCGTCTTTACAAGCCCTAAACCCAGGGAGAAGAGTGAGGAGTTAAAGGCTAGA
CTGAAGAAGCTTGCAGATGTAGCAGAGAGGAAGGCCTATCAGGAACTAGTGAAAGATATTGCACCTAAGAAACCAATTGATGAGCCTTTCTCTTCCTACAAGGATCAGCT
CGGATTCGGTCTACATGTCGTGTTGATAATGTTTACCGGCTATCTTGTTGGGTATGCTTTATTCCGAGCATTGTTTAGGCATGATCCAATCATGAGTGCCGCTGGAGGTA
TCCTTGGATTAGTTTTTGGCATGCTCGTAGAAACACTTCTTTTCATCATTCGATCATCCAATTACGATAATCGGTCTTCATCATCTTCCCGTTCTAAGCTGAAGAAGAGT
CAGTAGAGTTCCTTCTAGAGATCCAAGCATAAACAAGTAATAACAAGGCCTTGTTAATGCACTTGCTTCAATTTATTTGTACAAAGACACGTTCTTCACATCAAGAGAAT
TGAGAAGCAATATGTAATGCTTCAGCCTATGACCACAGAAAATGTTCTTCACATCAAGAGATATGTAATGATTGTATTGTACTCTCTTCAGCCTATGACTACAGAAAAAG
GAAAGCTCAATCATGCCCTTCAAATAATTGTCTTTTGGAAGAGAAACCTTAATGTAAATTTTTTTTTACTTCAAATAACAATCCGTTTGAAATTTGAAGGTAGCCTTTTG
GTATCCATTGATCTGATGTTACACGGTCGACAGCATCCGACAAGTTTGCCCTTTTTTTTGAAGGGTGTCTAACTATATCGATA

Protein sequence

Show/hide protein sequence

MINDHALPSGLLLSHTEAIRSFLTSASIDSQLSDELRQIASDLVSQRNIPYKLLRAIWFATESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLADVAERKAYQE
LVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRSSNYDNRSSSSSRSKLKKSQ

CSPI06G00460 (gene) of Cucumber (PI 183967) v1 genome