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CSPI06G01030 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G01030
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionActin-related protein 2/3 complex subunit 5
Genome locationChr6:765569..769971
RNA-Seq ExpressionCSPI06G01030
SyntenyCSPI06G01030
Gene Ontology termsGO:0030833 - regulation of actin filament polymerization (biological process)
GO:0034314 - Arp2/3 complex-mediated actin nucleation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005885 - Arp2/3 protein complex (cellular component)
GO:0051015 - actin filament binding (molecular function)
InterPro domainsIPR006789 - Actin-related protein 2/3 complex subunit 5
IPR036743 - Actin-related protein 2/3 complex subunit 5 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004138489.1 actin-related protein 2/3 complex subunit 5A [Cucumis sativus]9.0e-71100Show/hide
Query:  MATTCDFVEADNAEAIITRIEHKSRKIESLLKQLKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTG
        MATTCDFVEADNAEAIITRIEHKSRKIESLLKQLKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTG
Subjt:  MATTCDFVEADNAEAIITRIEHKSRKIESLLKQLKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTG

Query:  DRPTCDQCLRIHEKLTERAGLGCILRSLADTVNTV
        DRPTCDQCLRIHEKLTERAGLGCILRSLADTVNTV
Subjt:  DRPTCDQCLRIHEKLTERAGLGCILRSLADTVNTV

XP_008441367.1 PREDICTED: actin-related protein 2/3 complex subunit 5A [Cucumis melo]1.7e-6997.78Show/hide
Query:  MATTCDFVEADNAEAIITRIEHKSRKIESLLKQLKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTG
        MATTC+FVEADNAEAIITRIEHKSRKIESLLKQ KPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTG
Subjt:  MATTCDFVEADNAEAIITRIEHKSRKIESLLKQLKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTG

Query:  DRPTCDQCLRIHEKLTERAGLGCILRSLADTVNTV
        DRPTCDQCLRIHEKLTERAGLGCILRSLADT+NTV
Subjt:  DRPTCDQCLRIHEKLTERAGLGCILRSLADTVNTV

XP_010089302.1 actin-related protein 2/3 complex subunit 5A [Morus notabilis]6.1e-6797.04Show/hide
Query:  MATTCDFVEADNAEAIITRIEHKSRKIESLLKQLKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTG
        MA T  FVEADNAEAIITRIEHKSRKIESLLKQ KPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTG
Subjt:  MATTCDFVEADNAEAIITRIEHKSRKIESLLKQLKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTG

Query:  DRPTCDQCLRIHEKLTERAGLGCILRSLADTVNTV
        DRPTCDQCLRIHEKLTERAGLGCILRSLADTVNTV
Subjt:  DRPTCDQCLRIHEKLTERAGLGCILRSLADTVNTV

XP_015889484.1 actin-related protein 2/3 complex subunit 5A [Ziziphus jujuba]2.7e-6796.3Show/hide
Query:  MATTCDFVEADNAEAIITRIEHKSRKIESLLKQLKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTG
        MA T +FVEADNAEAIITRIEHKSRKIESLLKQ KPVEALKTALEGSPPNTRDERCKSANWIVVHRA+MAIKDVDGMFSSLDPEYYDILMKYLYRGLSTG
Subjt:  MATTCDFVEADNAEAIITRIEHKSRKIESLLKQLKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTG

Query:  DRPTCDQCLRIHEKLTERAGLGCILRSLADTVNTV
        DRPTCDQCLRIHEKLTERAGLGCILRSLADTVNTV
Subjt:  DRPTCDQCLRIHEKLTERAGLGCILRSLADTVNTV

XP_038884940.1 actin-related protein 2/3 complex subunit 5A [Benincasa hispida]9.4e-6896.3Show/hide
Query:  MATTCDFVEADNAEAIITRIEHKSRKIESLLKQLKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTG
        MATT +FVEADNAEAIITRIEHKSRKIESLLKQ +PVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTG
Subjt:  MATTCDFVEADNAEAIITRIEHKSRKIESLLKQLKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTG

Query:  DRPTCDQCLRIHEKLTERAGLGCILRSLADTVNTV
        DRPTCDQCLRIHEKLTERAGLGCILRSLADT+NTV
Subjt:  DRPTCDQCLRIHEKLTERAGLGCILRSLADTVNTV

TrEMBL top hitse value%identityAlignment
A0A0A0KD59 Actin-related protein 2/3 complex subunit 54.4e-71100Show/hide
Query:  MATTCDFVEADNAEAIITRIEHKSRKIESLLKQLKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTG
        MATTCDFVEADNAEAIITRIEHKSRKIESLLKQLKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTG
Subjt:  MATTCDFVEADNAEAIITRIEHKSRKIESLLKQLKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTG

Query:  DRPTCDQCLRIHEKLTERAGLGCILRSLADTVNTV
        DRPTCDQCLRIHEKLTERAGLGCILRSLADTVNTV
Subjt:  DRPTCDQCLRIHEKLTERAGLGCILRSLADTVNTV

A0A1S3B407 Actin-related protein 2/3 complex subunit 58.3e-7097.78Show/hide
Query:  MATTCDFVEADNAEAIITRIEHKSRKIESLLKQLKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTG
        MATTC+FVEADNAEAIITRIEHKSRKIESLLKQ KPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTG
Subjt:  MATTCDFVEADNAEAIITRIEHKSRKIESLLKQLKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTG

Query:  DRPTCDQCLRIHEKLTERAGLGCILRSLADTVNTV
        DRPTCDQCLRIHEKLTERAGLGCILRSLADT+NTV
Subjt:  DRPTCDQCLRIHEKLTERAGLGCILRSLADTVNTV

A0A6J1BVD6 Actin-related protein 2/3 complex subunit 58.6e-6794.07Show/hide
Query:  MATTCDFVEADNAEAIITRIEHKSRKIESLLKQLKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTG
        MA   +FVEADNAEAIITRIEHKSRKIESLLKQ +PVEALKTALEGSPPNTRDERCKSANWI VHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTG
Subjt:  MATTCDFVEADNAEAIITRIEHKSRKIESLLKQLKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTG

Query:  DRPTCDQCLRIHEKLTERAGLGCILRSLADTVNTV
        DRPTCDQCLRIHEKLTERAGLGCILRSLADT+NTV
Subjt:  DRPTCDQCLRIHEKLTERAGLGCILRSLADTVNTV

A0A6P4A354 Actin-related protein 2/3 complex subunit 51.3e-6796.3Show/hide
Query:  MATTCDFVEADNAEAIITRIEHKSRKIESLLKQLKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTG
        MA T +FVEADNAEAIITRIEHKSRKIESLLKQ KPVEALKTALEGSPPNTRDERCKSANWIVVHRA+MAIKDVDGMFSSLDPEYYDILMKYLYRGLSTG
Subjt:  MATTCDFVEADNAEAIITRIEHKSRKIESLLKQLKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTG

Query:  DRPTCDQCLRIHEKLTERAGLGCILRSLADTVNTV
        DRPTCDQCLRIHEKLTERAGLGCILRSLADTVNTV
Subjt:  DRPTCDQCLRIHEKLTERAGLGCILRSLADTVNTV

W9R3V7 Actin-related protein 2/3 complex subunit 52.9e-6797.04Show/hide
Query:  MATTCDFVEADNAEAIITRIEHKSRKIESLLKQLKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTG
        MA T  FVEADNAEAIITRIEHKSRKIESLLKQ KPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTG
Subjt:  MATTCDFVEADNAEAIITRIEHKSRKIESLLKQLKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTG

Query:  DRPTCDQCLRIHEKLTERAGLGCILRSLADTVNTV
        DRPTCDQCLRIHEKLTERAGLGCILRSLADTVNTV
Subjt:  DRPTCDQCLRIHEKLTERAGLGCILRSLADTVNTV

SwissProt top hitse value%identityAlignment
B3H6Y2 Actin-related protein 2/3 complex subunit 5B2.2e-5679.26Show/hide
Query:  MATTCDFVEADNAEAIITRIEHKSRKIESLLKQLKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTG
        MA    FVEADNAE I+ RIE KS+KIESLLK  K VEALKTAL+GSPP T DERCKSANWIVVHRA+MAIKD++GM +SL  EYYDILMKYLYRGLSTG
Subjt:  MATTCDFVEADNAEAIITRIEHKSRKIESLLKQLKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTG

Query:  DRPTCDQCLRIHEKLTERAGLGCILRSLADTVNTV
        D PTC+QCL IHEKLTERAGLGCILR L+DT NTV
Subjt:  DRPTCDQCLRIHEKLTERAGLGCILRSLADTVNTV

O15511 Actin-related protein 2/3 complex subunit 54.6e-0932.38Show/hide
Query:  KIESLLKQLKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIK--DVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGC
        +++S L+Q     AL+ AL+  P NT+ +  K     +V + L++ K  D++    SLD    D+LMKY+Y+G  +    +    L+ HEK     G+G 
Subjt:  KIESLLKQLKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIK--DVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGC

Query:  ILRSL
        I+R L
Subjt:  ILRSL

Q5R516 Actin-related protein 2/3 complex subunit 54.6e-0932.38Show/hide
Query:  KIESLLKQLKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIK--DVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGC
        +++S L+Q     AL+ AL+  P NT+ +  K     +V + L++ K  D++    SLD    D+LMKY+Y+G  +    +    L+ HEK     G+G 
Subjt:  KIESLLKQLKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIK--DVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGC

Query:  ILRSL
        I+R L
Subjt:  ILRSL

Q6DE18 Actin-related protein 2/3 complex subunit 5-B3.5e-0931.43Show/hide
Query:  KIESLLKQLKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIK--DVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGC
        +++SL++Q + + A ++AL  SP N++++  K     +V + L + K  +++   ++LDP   D+LMKY+Y+G       +    L+ HEK     GLG 
Subjt:  KIESLLKQLKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIK--DVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGC

Query:  ILRSL
        I+R L
Subjt:  ILRSL

Q9M117 Actin-related protein 2/3 complex subunit 5A8.0e-6288.46Show/hide
Query:  DFVEADNAEAIITRIEHKSRKIESLLKQLKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTC
        +FVEADNAEAII RIE KSRKIESLLKQ K VEALKTALEGSPP TRDERCKSANWIVVHRALMAIKD+DGM ++LD EYYDILMKYLYRGLSTGDRPTC
Subjt:  DFVEADNAEAIITRIEHKSRKIESLLKQLKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTC

Query:  DQCLRIHEKLTERAGLGCILRSLADTVNTV
        DQCL+IHEKLTERAGLGCILR L DT+NTV
Subjt:  DQCLRIHEKLTERAGLGCILRSLADTVNTV

Arabidopsis top hitse value%identityAlignment
AT4G01710.1 ARP2/3 complex 16 kDa subunit (p16-Arc)5.7e-6388.46Show/hide
Query:  DFVEADNAEAIITRIEHKSRKIESLLKQLKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTC
        +FVEADNAEAII RIE KSRKIESLLKQ K VEALKTALEGSPP TRDERCKSANWIVVHRALMAIKD+DGM ++LD EYYDILMKYLYRGLSTGDRPTC
Subjt:  DFVEADNAEAIITRIEHKSRKIESLLKQLKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTC

Query:  DQCLRIHEKLTERAGLGCILRSLADTVNTV
        DQCL+IHEKLTERAGLGCILR L DT+NTV
Subjt:  DQCLRIHEKLTERAGLGCILRSLADTVNTV

AT5G65274.1 ARP2/3 complex 16 kDa subunit (p16-Arc)1.6e-5779.26Show/hide
Query:  MATTCDFVEADNAEAIITRIEHKSRKIESLLKQLKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTG
        MA    FVEADNAE I+ RIE KS+KIESLLK  K VEALKTAL+GSPP T DERCKSANWIVVHRA+MAIKD++GM +SL  EYYDILMKYLYRGLSTG
Subjt:  MATTCDFVEADNAEAIITRIEHKSRKIESLLKQLKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTG

Query:  DRPTCDQCLRIHEKLTERAGLGCILRSLADTVNTV
        D PTC+QCL IHEKLTERAGLGCILR L+DT NTV
Subjt:  DRPTCDQCLRIHEKLTERAGLGCILRSLADTVNTV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACTACATGCGATTTTGTCGAAGCAGATAATGCAGAAGCCATAATCACCAGAATTGAGCACAAATCTCGAAAGATTGAGAGCTTACTTAAACAGTTAAAACCAGT
CGAAGCTCTTAAAACTGCTCTTGAAGGTTCCCCTCCAAATACCCGGGACGAGCGTTGTAAGTCAGCAAATTGGATTGTGGTGCATAGGGCTCTCATGGCTATAAAGGATG
TAGATGGGATGTTTTCTTCGTTGGATCCAGAGTACTATGATATTCTAATGAAGTACTTGTATAGAGGGTTGTCAACTGGTGATCGTCCCACATGTGATCAATGTCTCAGG
ATACATGAAAAGTTGACAGAAAGGGCTGGCTTAGGCTGCATTCTTCGTTCTCTTGCCGATACTGTTAATACTGTTTGA
mRNA sequenceShow/hide mRNA sequence
AAAATTTTAAATGAACTATTAATAAACAAAACCATCGCAACCCAAAAGACCATTCGGCGGCGAGAAAACTTGCCATCTCTTCTTTTCACAAATCACATTTAGCTCCGATT
TCGTTCATACAACTGTTGGGTTATCGATCTGTATTGGTATGATCGGTTTTTAGTTTAGCTCCATCAAATCCTACTGCAAGTAGGGTGATACCGCAAAGGCGAAAATGGCG
ACTACATGCGATTTTGTCGAAGCAGATAATGCAGAAGCCATAATCACCAGAATTGAGCACAAATCTCGAAAGATTGAGAGCTTACTTAAACAGTTAAAACCAGTCGAAGC
TCTTAAAACTGCTCTTGAAGGTTCCCCTCCAAATACCCGGGACGAGCGTTGTAAGTCAGCAAATTGGATTGTGGTGCATAGGGCTCTCATGGCTATAAAGGATGTAGATG
GGATGTTTTCTTCGTTGGATCCAGAGTACTATGATATTCTAATGAAGTACTTGTATAGAGGGTTGTCAACTGGTGATCGTCCCACATGTGATCAATGTCTCAGGATACAT
GAAAAGTTGACAGAAAGGGCTGGCTTAGGCTGCATTCTTCGTTCTCTTGCCGATACTGTTAATACTGTTTGATTTTTCTTTTGAGCAACTTTTGGTTAACGTTGGATATA
TGTCAAACTAAGAGCTGAAAATTTACTCAATTCTTTCGAGTTTTGACAGCTGTAAATTGCTTTCCAGATTGTGGATTTATGTCAACCAGATTTAATTTCTAAATGTACTT
GTAATTTGTAATTTGAACATTTGAATGTAAATGACTGAAATTGAATATAACCTTTGGACTGGACCAAGTTAGAGCATGG
Protein sequenceShow/hide protein sequence
MATTCDFVEADNAEAIITRIEHKSRKIESLLKQLKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLR
IHEKLTERAGLGCILRSLADTVNTV