; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI06G02450 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G02450
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionDNA excision repair protein ERCC-1
Genome locationChr6:1832622..1838795
RNA-Seq ExpressionCSPI06G02450
SyntenyCSPI06G02450
Gene Ontology termsGO:0000710 - meiotic mismatch repair (biological process)
GO:0006296 - nucleotide-excision repair, DNA incision, 5'-to lesion (biological process)
GO:0006312 - mitotic recombination (biological process)
GO:0070914 - UV-damage excision repair (biological process)
GO:0000110 - nucleotide-excision repair factor 1 complex (cellular component)
GO:0070522 - ERCC4-ERCC1 complex (cellular component)
GO:0003684 - damaged DNA binding (molecular function)
GO:0003697 - single-stranded DNA binding (molecular function)
GO:0004518 - nuclease activity (molecular function)
InterPro domainsIPR004579 - ERCC1/RAD10/SWI10 family
IPR010994 - RuvA domain 2-like
IPR011335 - Restriction endonuclease type II-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK02347.1 DNA excision repair protein ERCC-1 [Cucumis melo var. makuwa]4.6e-15295.62Show/hide
Query:  MEEGSAEDNFQQTPPHKKSKTIIKIPSYQEVIDSSQPNSQSFSQAFAFLKSSEFYSPPPKPPSPSSSQSLPPSNITNPRKNDQLDTSSSSTSASAATPVN
        MEEGSAE+NFQQT PHKKSKTIIKIPSYQEV DSSQP SQSFSQAFAFLKSSEFYSPPPKPPSPSSSQSLP SNITNPRKNDQLDTSSSSTSAS ATPVN
Subjt:  MEEGSAEDNFQQTPPHKKSKTIIKIPSYQEVIDSSQPNSQSFSQAFAFLKSSEFYSPPPKPPSPSSSQSLPPSNITNPRKNDQLDTSSSSTSASAATPVN

Query:  SLSVSSSVSRNAILVSNRQKGNPLLKHIRNARWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVILCHVDVEDVVKPLLEVTKT
        SLSVSSSVSRNAILVSNRQKGNPLLKHIRN RWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRV+LCHVDVEDVVKPLLEVTKT
Subjt:  SLSVSSSVSRNAILVSNRQKGNPLLKHIRNARWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVILCHVDVEDVVKPLLEVTKT

Query:  ALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGHMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGKAAVRHL
        ALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQG MDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIG+  VR L
Subjt:  ALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGHMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGKAAVRHL

XP_004138378.1 DNA excision repair protein ERCC-1 isoform X1 [Cucumis sativus]3.3e-15898.32Show/hide
Query:  MEEGSAEDNFQQTPPHKKSKTIIKIPSYQEVIDSSQPNSQSFSQAFAFLKSSEFYSPPPKPPSPSSSQSLPPSNITNPRKNDQLDTSSSSTSASAATPVN
        MEEGSAEDNFQQTPPHKKSKTIIKIPSYQEVIDSSQPNSQSFSQAFAFLKSSEFYSPPPKPPSPSSSQSLPPSNITNPRKNDQLDTSSSSTSASAATPVN
Subjt:  MEEGSAEDNFQQTPPHKKSKTIIKIPSYQEVIDSSQPNSQSFSQAFAFLKSSEFYSPPPKPPSPSSSQSLPPSNITNPRKNDQLDTSSSSTSASAATPVN

Query:  SLSVSSSVSRNAILVSNRQKGNPLLKHIRNARWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVILCHVDVEDVVKPLLEVTKT
        SLSVSSSVSRNAILVSNRQKGNPLLKHIRN RWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVILCHVDVEDVVKPLLEVTKT
Subjt:  SLSVSSSVSRNAILVSNRQKGNPLLKHIRNARWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVILCHVDVEDVVKPLLEVTKT

Query:  ALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGHMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGKAAVRHL
        ALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGHMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIG+  VR L
Subjt:  ALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGHMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGKAAVRHL

XP_008463078.1 PREDICTED: DNA excision repair protein ERCC-1 [Cucumis melo]4.6e-15295.62Show/hide
Query:  MEEGSAEDNFQQTPPHKKSKTIIKIPSYQEVIDSSQPNSQSFSQAFAFLKSSEFYSPPPKPPSPSSSQSLPPSNITNPRKNDQLDTSSSSTSASAATPVN
        MEEGSAE+NFQQT PHKKSKTIIKIPSYQEV DSSQP SQSFSQAFAFLKSSEFYSPPPKPPSPSSSQSLP SNITNPRKNDQLDTSSSSTSAS ATPVN
Subjt:  MEEGSAEDNFQQTPPHKKSKTIIKIPSYQEVIDSSQPNSQSFSQAFAFLKSSEFYSPPPKPPSPSSSQSLPPSNITNPRKNDQLDTSSSSTSASAATPVN

Query:  SLSVSSSVSRNAILVSNRQKGNPLLKHIRNARWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVILCHVDVEDVVKPLLEVTKT
        SLSVSSSVSRNAILVSNRQKGNPLLKHIRN RWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRV+LCHVDVEDVVKPLLEVTKT
Subjt:  SLSVSSSVSRNAILVSNRQKGNPLLKHIRNARWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVILCHVDVEDVVKPLLEVTKT

Query:  ALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGHMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGKAAVRHL
        ALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQG MDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIG+  VR L
Subjt:  ALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGHMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGKAAVRHL

XP_011656460.1 DNA excision repair protein ERCC-1 isoform X2 [Cucumis sativus]3.3e-15894.89Show/hide
Query:  MEEGSAEDNFQQTPPHKKSKTIIKIPSYQEVIDSSQPNSQSFSQAFAFLKSSEFYSPPPKPPSPSSSQSLPPSNITNPRKNDQLDTSSSSTSASAATPVN
        MEEGSAEDNFQQTPPHKKSKTIIKIPSYQEVIDSSQPNSQSFSQAFAFLKSSEFYSPPPKPPSPSSSQSLPPSNITNPRKNDQLDTSSSSTSASAATPVN
Subjt:  MEEGSAEDNFQQTPPHKKSKTIIKIPSYQEVIDSSQPNSQSFSQAFAFLKSSEFYSPPPKPPSPSSSQSLPPSNITNPRKNDQLDTSSSSTSASAATPVN

Query:  SLSVSSSVSRNAILVSNRQKGNPLLKHIRNARWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVILCHVDVEDVVKPLLEVTKT
        SLSVSSSVSRNAILVSNRQKGNPLLKHIRN RWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVILCHVDVEDVVKPLLEVTKT
Subjt:  SLSVSSSVSRNAILVSNRQKGNPLLKHIRNARWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVILCHVDVEDVVKPLLEVTKT

Query:  ALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGHMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIG----------
        ALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGHMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIG          
Subjt:  ALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGHMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIG----------

Query:  -----KAAVRHLS
             KAAVRHLS
Subjt:  -----KAAVRHLS

XP_011656461.1 DNA excision repair protein ERCC-1 isoform X3 [Cucumis sativus]3.2e-16199.66Show/hide
Query:  MEEGSAEDNFQQTPPHKKSKTIIKIPSYQEVIDSSQPNSQSFSQAFAFLKSSEFYSPPPKPPSPSSSQSLPPSNITNPRKNDQLDTSSSSTSASAATPVN
        MEEGSAEDNFQQTPPHKKSKTIIKIPSYQEVIDSSQPNSQSFSQAFAFLKSSEFYSPPPKPPSPSSSQSLPPSNITNPRKNDQLDTSSSSTSASAATPVN
Subjt:  MEEGSAEDNFQQTPPHKKSKTIIKIPSYQEVIDSSQPNSQSFSQAFAFLKSSEFYSPPPKPPSPSSSQSLPPSNITNPRKNDQLDTSSSSTSASAATPVN

Query:  SLSVSSSVSRNAILVSNRQKGNPLLKHIRNARWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVILCHVDVEDVVKPLLEVTKT
        SLSVSSSVSRNAILVSNRQKGNPLLKHIRN RWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVILCHVDVEDVVKPLLEVTKT
Subjt:  SLSVSSSVSRNAILVSNRQKGNPLLKHIRNARWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVILCHVDVEDVVKPLLEVTKT

Query:  ALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGHMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGKAAVRHLS
        ALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGHMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGKAAVRHLS
Subjt:  ALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGHMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGKAAVRHLS

TrEMBL top hitse value%identityAlignment
A0A0A0KDK6 Uncharacterized protein1.6e-15898.32Show/hide
Query:  MEEGSAEDNFQQTPPHKKSKTIIKIPSYQEVIDSSQPNSQSFSQAFAFLKSSEFYSPPPKPPSPSSSQSLPPSNITNPRKNDQLDTSSSSTSASAATPVN
        MEEGSAEDNFQQTPPHKKSKTIIKIPSYQEVIDSSQPNSQSFSQAFAFLKSSEFYSPPPKPPSPSSSQSLPPSNITNPRKNDQLDTSSSSTSASAATPVN
Subjt:  MEEGSAEDNFQQTPPHKKSKTIIKIPSYQEVIDSSQPNSQSFSQAFAFLKSSEFYSPPPKPPSPSSSQSLPPSNITNPRKNDQLDTSSSSTSASAATPVN

Query:  SLSVSSSVSRNAILVSNRQKGNPLLKHIRNARWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVILCHVDVEDVVKPLLEVTKT
        SLSVSSSVSRNAILVSNRQKGNPLLKHIRN RWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVILCHVDVEDVVKPLLEVTKT
Subjt:  SLSVSSSVSRNAILVSNRQKGNPLLKHIRNARWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVILCHVDVEDVVKPLLEVTKT

Query:  ALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGHMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGKAAVRHL
        ALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGHMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIG+  VR L
Subjt:  ALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGHMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGKAAVRHL

A0A1S3CIE0 DNA excision repair protein ERCC-12.2e-15295.62Show/hide
Query:  MEEGSAEDNFQQTPPHKKSKTIIKIPSYQEVIDSSQPNSQSFSQAFAFLKSSEFYSPPPKPPSPSSSQSLPPSNITNPRKNDQLDTSSSSTSASAATPVN
        MEEGSAE+NFQQT PHKKSKTIIKIPSYQEV DSSQP SQSFSQAFAFLKSSEFYSPPPKPPSPSSSQSLP SNITNPRKNDQLDTSSSSTSAS ATPVN
Subjt:  MEEGSAEDNFQQTPPHKKSKTIIKIPSYQEVIDSSQPNSQSFSQAFAFLKSSEFYSPPPKPPSPSSSQSLPPSNITNPRKNDQLDTSSSSTSASAATPVN

Query:  SLSVSSSVSRNAILVSNRQKGNPLLKHIRNARWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVILCHVDVEDVVKPLLEVTKT
        SLSVSSSVSRNAILVSNRQKGNPLLKHIRN RWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRV+LCHVDVEDVVKPLLEVTKT
Subjt:  SLSVSSSVSRNAILVSNRQKGNPLLKHIRNARWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVILCHVDVEDVVKPLLEVTKT

Query:  ALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGHMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGKAAVRHL
        ALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQG MDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIG+  VR L
Subjt:  ALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGHMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGKAAVRHL

A0A5A7T0A2 DNA excision repair protein ERCC-14.2e-15195.92Show/hide
Query:  MEEGSAEDNFQQTPPHKKSKTIIKIPSYQEVIDSSQPNSQSFSQAFAFLKSSEFYSPPPKPPSPSSSQSLPPSNITNPRKNDQLDTSSSSTSASAATPVN
        MEEGSAE+NFQQT PHKKSKTIIKIPSYQEV DSSQP SQSFSQAFAFLKSSEFYSPPPKPPSPSSSQSLP SNITNPRKNDQLDTSSSSTSAS ATPVN
Subjt:  MEEGSAEDNFQQTPPHKKSKTIIKIPSYQEVIDSSQPNSQSFSQAFAFLKSSEFYSPPPKPPSPSSSQSLPPSNITNPRKNDQLDTSSSSTSASAATPVN

Query:  SLSVSSSVSRNAILVSNRQKGNPLLKHIRNARWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVILCHVDVEDVVKPLLEVTKT
        SLSVSSSVSRNAILVSNRQKGNPLLKHIRN RWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRV+LCHVDVEDVVKPLLEVTKT
Subjt:  SLSVSSSVSRNAILVSNRQKGNPLLKHIRNARWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVILCHVDVEDVVKPLLEVTKT

Query:  ALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGHMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGKAAV
        ALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQG MDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIG+  V
Subjt:  ALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGHMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGKAAV

A0A5D3BSF5 DNA excision repair protein ERCC-12.2e-15295.62Show/hide
Query:  MEEGSAEDNFQQTPPHKKSKTIIKIPSYQEVIDSSQPNSQSFSQAFAFLKSSEFYSPPPKPPSPSSSQSLPPSNITNPRKNDQLDTSSSSTSASAATPVN
        MEEGSAE+NFQQT PHKKSKTIIKIPSYQEV DSSQP SQSFSQAFAFLKSSEFYSPPPKPPSPSSSQSLP SNITNPRKNDQLDTSSSSTSAS ATPVN
Subjt:  MEEGSAEDNFQQTPPHKKSKTIIKIPSYQEVIDSSQPNSQSFSQAFAFLKSSEFYSPPPKPPSPSSSQSLPPSNITNPRKNDQLDTSSSSTSASAATPVN

Query:  SLSVSSSVSRNAILVSNRQKGNPLLKHIRNARWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVILCHVDVEDVVKPLLEVTKT
        SLSVSSSVSRNAILVSNRQKGNPLLKHIRN RWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRV+LCHVDVEDVVKPLLEVTKT
Subjt:  SLSVSSSVSRNAILVSNRQKGNPLLKHIRNARWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVILCHVDVEDVVKPLLEVTKT

Query:  ALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGHMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGKAAVRHL
        ALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQG MDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIG+  VR L
Subjt:  ALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGHMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGKAAVRHL

A0A6J1HYZ8 DNA excision repair protein ERCC-1 isoform X19.4e-14389.23Show/hide
Query:  MEEGSAEDNFQQTPPHKKSKTIIKIPSYQEVIDSSQPNSQSFSQAFAFLKSSEFYSPPPKPPSPSSSQSLPPSNITNPRKNDQLDTSSSSTSASAATPVN
        ME+G  E+N QQT  HKK KTIIKI SYQEVIDSSQP SQSFSQAFAFLKS+EFYSPPP+P   SSSQSLP S+ITNPRKNDQLDTS SSTSASAATP N
Subjt:  MEEGSAEDNFQQTPPHKKSKTIIKIPSYQEVIDSSQPNSQSFSQAFAFLKSSEFYSPPPKPPSPSSSQSLPPSNITNPRKNDQLDTSSSSTSASAATPVN

Query:  SLSVSSSVSRNAILVSNRQKGNPLLKHIRNARWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVILCHVDVEDVVKPLLEVTKT
        SLS SSSV+RNAILVSNRQ+GNPLLKHIRN RW FADVVPDYLLG+SSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRV+LCHVDVEDVVKPLLEVTKT
Subjt:  SLSVSSSVSRNAILVSNRQKGNPLLKHIRNARWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVILCHVDVEDVVKPLLEVTKT

Query:  ALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGHMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGKAAVRHL
        ALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQG MDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSH+MDASMEDLARCPGIG+  VR L
Subjt:  ALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGHMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGKAAVRHL

SwissProt top hitse value%identityAlignment
P07903 DNA excision repair protein ERCC-11.1e-5549.17Show/hide
Query:  PPSPSSSQSLPPSN-----ITNPRKNDQLDTSSSSTSASAATPVNSLSVSSSVSRNAILVSNRQKGNPLLKHIRNARWAFADVVPDYLLGQSSCALYLSL
        P  P++S  + P       IT P         + S  A+   P  S ++ +    N+I+VS RQ+GNP+LK +RN  W F +V+PDY+LGQS+CAL+LSL
Subjt:  PPSPSSSQSLPPSN-----ITNPRKNDQLDTSSSSTSASAATPVNSLSVSSSVSRNAILVSNRQKGNPLLKHIRNARWAFADVVPDYLLGQSSCALYLSL

Query:  RYHLLHPDYLYYRIRELQKNFKLRVILCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGHMDTDYLSRLTHVLTSVR
        RYH LHPDY++ R++ L KNF LRV+L  VDV+D  + L E+ K  +L DCTL+ AWS EE GRYLET K YE KPADL+   ++ ++LSR T  LT+V+
Subjt:  RYHLLHPDYLYYRIRELQKNFKLRVILCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGHMDTDYLSRLTHVLTSVR

Query:  HVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGKAAVRHL
         VNKTD  TL  TFGSL  +  AS EDLA CPG+G    R L
Subjt:  HVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGKAAVRHL

P07992 DNA excision repair protein ERCC-12.5e-5546.35Show/hide
Query:  QPNSQSFSQAFAFLKSSEFYSPPPKPPSPSSSQSLP---PSNITNPRKNDQLDTSSSSTSASAATPVNS---------LSVSSSVSRNAILVSNRQKGNP
        QP+     + F      +   P    P   S+QSLP    S    P+   +   S     A A  P  S          ++      N+I+VS RQ+GNP
Subjt:  QPNSQSFSQAFAFLKSSEFYSPPPKPPSPSSSQSLP---PSNITNPRKNDQLDTSSSSTSASAATPVNS---------LSVSSSVSRNAILVSNRQKGNP

Query:  LLKHIRNARWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVILCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLET
        +LK +RN  W F DV+PDY+LGQS+CAL+LSLRYH LHPDY++ R++ L KNF LRV+L  VDV+D  + L E+ K  +L DCTL+ AWS EE GRYLET
Subjt:  LLKHIRNARWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVILCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLET

Query:  IKVYENKPADLIQGHMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGKAAVRHL
         K YE KPADL+   ++ D++SR+T  LT+V+ VNKTD  TL TTFGSL  ++ AS EDLA CPG+G    R L
Subjt:  IKVYENKPADLIQGHMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGKAAVRHL

Q06182 Mating-type switching protein swi101.9e-4447.09Show/hide
Query:  SSVSRNAILVSNRQKGNPLLKHIRNARWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVILCHVDVEDVVKPLLEVTKTALLHD
        S V+ ++ILV+ RQKGNPLL H+RN  W + D+VPD+++G   C+L+LSL+YH LHP+Y+Y RI +L K++ LR++L  VDVE+    + E+ KT++++ 
Subjt:  SSVSRNAILVSNRQKGNPLLKHIRNARWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVILCHVDVEDVVKPLLEVTKTALLHD

Query:  CTLLCAWSLEECGRYLETIKVYENKPADLIQGHMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGKAAV
         TL+ AWS EE  RYLET K YEN    LI     TDYLS++   LTS+R +NK+D ++L + FGSL   + AS ++L +  G G   V
Subjt:  CTLLCAWSLEECGRYLETIKVYENKPADLIQGHMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGKAAV

Q1LZ75 DNA excision repair protein ERCC-11.3e-5344.53Show/hide
Query:  QPNSQSFSQAFAFLKSSEFYSPPPKPPSPSSSQSLP---PSNITNPRKNDQLDTSSSSTSASAATPVN---------SLSVSSSVSRNAILVSNRQKGNP
        +P      + F      +   PP   P   S++SLP    S    P+   +   S     A A  PV          + +       N+I+VS RQ+GNP
Subjt:  QPNSQSFSQAFAFLKSSEFYSPPPKPPSPSSSQSLP---PSNITNPRKNDQLDTSSSSTSASAATPVN---------SLSVSSSVSRNAILVSNRQKGNP

Query:  LLKHIRNARWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVILCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLET
        +L+ +RN  W F DV+PDY+LGQS+CAL+LSLRYH LHPDY++ R++ L K++ LRV+L  VDV+D  + L E+ K  +L DCTL+ AWS EE GRYLET
Subjt:  LLKHIRNARWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVILCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLET

Query:  IKVYENKPADLIQGHMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGKAAVRHL
         K YE KPADL+   ++ D++SR+T  LT+V+ VNKTD  TL TTFGSL  ++ AS EDL+ CPG+G    R L
Subjt:  IKVYENKPADLIQGHMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGKAAVRHL

Q9MA98 DNA excision repair protein ERCC-11.0e-10667.57Show/hide
Query:  QQTPPHKKSKTIIKIPSYQEVIDSSQPN---------SQSFSQAFAFLKSSEFYSPPPKPPSPSSSQSLPPSNITNPRKNDQLDTSSSSTSASAATPVNS
        QQ     K++ +I +PSYQEV++SSQ           SQSFSQAFAF+KSS+ YSPPP P S ++S S P      P  + Q   +  ++S+S      S
Subjt:  QQTPPHKKSKTIIKIPSYQEVIDSSQPN---------SQSFSQAFAFLKSSEFYSPPPKPPSPSSSQSLPPSNITNPRKNDQLDTSSSSTSASAATPVNS

Query:  LSVSSSVSRNAILVSNRQKGNPLLKHIRNARWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVILCHVDVEDVVKPLLEVTKTA
        +  +++ +RNAILVS+RQKGNPLLKHIRN +W F+D++PDY+LGQ+SCALYLSLRYHLLHPDYLY+RIRELQKNFKL V+LCHVDVED VKPLLEVTKTA
Subjt:  LSVSSSVSRNAILVSNRQKGNPLLKHIRNARWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVILCHVDVEDVVKPLLEVTKTA

Query:  LLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGHMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGKAAVRHL
        LLHDCTLLCAWS+ EC RYLETIKVYENKPADLIQG MDTDYLSRL H LTS+RHVNK+DVVTLG+TFGSL+HI+DASMEDLARCPGIG+  V+ L
Subjt:  LLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGHMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGKAAVRHL

Arabidopsis top hitse value%identityAlignment
AT3G05210.1 nucleotide repair protein, putative7.5e-10867.57Show/hide
Query:  QQTPPHKKSKTIIKIPSYQEVIDSSQPN---------SQSFSQAFAFLKSSEFYSPPPKPPSPSSSQSLPPSNITNPRKNDQLDTSSSSTSASAATPVNS
        QQ     K++ +I +PSYQEV++SSQ           SQSFSQAFAF+KSS+ YSPPP P S ++S S P      P  + Q   +  ++S+S      S
Subjt:  QQTPPHKKSKTIIKIPSYQEVIDSSQPN---------SQSFSQAFAFLKSSEFYSPPPKPPSPSSSQSLPPSNITNPRKNDQLDTSSSSTSASAATPVNS

Query:  LSVSSSVSRNAILVSNRQKGNPLLKHIRNARWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVILCHVDVEDVVKPLLEVTKTA
        +  +++ +RNAILVS+RQKGNPLLKHIRN +W F+D++PDY+LGQ+SCALYLSLRYHLLHPDYLY+RIRELQKNFKL V+LCHVDVED VKPLLEVTKTA
Subjt:  LSVSSSVSRNAILVSNRQKGNPLLKHIRNARWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVILCHVDVEDVVKPLLEVTKTA

Query:  LLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGHMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGKAAVRHL
        LLHDCTLLCAWS+ EC RYLETIKVYENKPADLIQG MDTDYLSRL H LTS+RHVNK+DVVTLG+TFGSL+HI+DASMEDLARCPGIG+  V+ L
Subjt:  LLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGHMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGKAAVRHL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAAGGAAGCGCAGAAGACAACTTTCAGCAAACCCCCCCTCACAAGAAGAGCAAGACCATTATCAAGATACCCTCATATCAAGAAGTCATCGATAGCTCACAGCC
AAACTCACAATCCTTCTCCCAAGCCTTTGCCTTCCTCAAATCCTCCGAGTTTTACTCTCCTCCTCCAAAACCACCATCTCCTTCCTCCTCCCAATCCTTGCCGCCTTCCA
ACATCACAAACCCAAGAAAAAATGATCAATTAGATACTTCATCTTCTTCAACATCAGCTTCTGCAGCTACTCCGGTTAATAGCTTGTCGGTGTCGAGTTCTGTTAGTCGC
AATGCCATTCTTGTCAGCAATAGACAGAAGGGAAATCCTCTTCTCAAACACATCAGGAATGCGAGATGGGCTTTTGCAGATGTAGTACCTGATTATTTACTTGGGCAAAG
CTCTTGTGCTCTCTATCTAAGTCTTCGGTATCATCTACTGCACCCAGACTACCTGTATTACCGTATAAGAGAATTGCAAAAGAATTTCAAGCTTCGTGTAATTCTGTGCC
ATGTTGATGTGGAAGATGTTGTTAAGCCTTTGCTTGAAGTCACCAAAACAGCTCTGCTTCACGATTGTACCCTTCTTTGTGCTTGGAGTTTGGAGGAATGTGGTCGCTAT
TTGGAGACTATAAAAGTCTATGAAAACAAGCCTGCAGATCTTATTCAAGGCCATATGGACACGGACTATCTGTCAAGGCTAACACATGTCCTAACATCAGTTCGGCATGT
TAATAAGACTGATGTGGTCACTCTTGGAACGACATTTGGGTCTCTATCTCATATCATGGATGCATCCATGGAAGATCTAGCTCGTTGCCCTGGTATAGGTAAGGCGGCTG
TACGACACCTTTCATGA
mRNA sequenceShow/hide mRNA sequence
CTTACAAAAACCTTACATGACAGAATCAAAATGTTATATTTTCTAAGTTAATGGGTTGGTGGTGAATCATAAAGAGAGGTCTCATCCCTACAAAAGAATCTCACAAAAGC
CCTCTGGACATCTCAATTTTCATAATCTGAAACAGCAGAAAGGGTAGAAGATTATGGAGGAAGGAAGCGCAGAAGACAACTTTCAGCAAACCCCCCCTCACAAGAAGAGC
AAGACCATTATCAAGATACCCTCATATCAAGAAGTCATCGATAGCTCACAGCCAAACTCACAATCCTTCTCCCAAGCCTTTGCCTTCCTCAAATCCTCCGAGTTTTACTC
TCCTCCTCCAAAACCACCATCTCCTTCCTCCTCCCAATCCTTGCCGCCTTCCAACATCACAAACCCAAGAAAAAATGATCAATTAGATACTTCATCTTCTTCAACATCAG
CTTCTGCAGCTACTCCGGTTAATAGCTTGTCGGTGTCGAGTTCTGTTAGTCGCAATGCCATTCTTGTCAGCAATAGACAGAAGGGAAATCCTCTTCTCAAACACATCAGG
AATGCGAGATGGGCTTTTGCAGATGTAGTACCTGATTATTTACTTGGGCAAAGCTCTTGTGCTCTCTATCTAAGTCTTCGGTATCATCTACTGCACCCAGACTACCTGTA
TTACCGTATAAGAGAATTGCAAAAGAATTTCAAGCTTCGTGTAATTCTGTGCCATGTTGATGTGGAAGATGTTGTTAAGCCTTTGCTTGAAGTCACCAAAACAGCTCTGC
TTCACGATTGTACCCTTCTTTGTGCTTGGAGTTTGGAGGAATGTGGTCGCTATTTGGAGACTATAAAAGTCTATGAAAACAAGCCTGCAGATCTTATTCAAGGCCATATG
GACACGGACTATCTGTCAAGGCTAACACATGTCCTAACATCAGTTCGGCATGTTAATAAGACTGATGTGGTCACTCTTGGAACGACATTTGGGTCTCTATCTCATATCAT
GGATGCATCCATGGAAGATCTAGCTCGTTGCCCTGGTATAGGTAAGGCGGCTGTACGACACCTTTCATGAGCCATTCAAACGTGTCGTTTCAACCCACCCTGCTGTTCCA
GAAACTCCAACCCAGATTAGTACCAAACCTCGGTCAAGCAATGAAGAACAAGATGTGGATGGGAAGAGAATAGAAGAAGATGGTAGCCAACACAGAAAGGAACCTAAATT
AAATGTCAAATCAGCTCTTTCTGCTGCTTTTGCCAAATATGCTGACAAAATTGCTAAAAGTGGTAGCATTCCACAAGAAAAAGAAAAAGGAGAACCTGAAAGTAGCAACA
CCCAGTAATTTTTACATTGCTTCTGGCCATCCATCCAAATCCGTTCTAATATTAAGACCATCTGATGAGAAGTAGCAACTGCAGGTCTGCTTGTTCGTGTTGCTGTAGAG
TATGATCACATGGCTACATCCTTCAGAACACAATTCAAACCTGCTCGTGTTGTGTTTAGAATGCTACTTTGCTGTCGTTTGGAACACAGGAGTGGAAGTGACTTTCAGTC
GCTCAAAAACGACATATAAGTTATATTTGCTTTTTGTATCTGTTAGATGTAACTTTTTCTGGACAAACAACAAATAAGGTCAGTAATAAGCGTGGTTTTTTCAGACACAG
GAAGGTTTCATCTGCTGATTTAGCCTCAAATTATTGTTTACTGAAGCACAATTGGAATTTTCTTTTTATGTTTTTTTATTTTTTAGTCATCAAGTTCATAAGTTTGACTA
GTGATTTGTTGTAGTTTAAGACTTGAAGGCCATTTGTTTGTATCTGCTGAGAAAGTGATGAAAAAGCAGTTTTACTGCTTTTAGTTGGAAGGGAA
Protein sequenceShow/hide protein sequence
MEEGSAEDNFQQTPPHKKSKTIIKIPSYQEVIDSSQPNSQSFSQAFAFLKSSEFYSPPPKPPSPSSSQSLPPSNITNPRKNDQLDTSSSSTSASAATPVNSLSVSSSVSR
NAILVSNRQKGNPLLKHIRNARWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVILCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRY
LETIKVYENKPADLIQGHMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGKAAVRHLS