; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI06G02560 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G02560
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description40S ribosomal protein SA
Genome locationChr6:1983111..1985699
RNA-Seq ExpressionCSPI06G02560
SyntenyCSPI06G02560
Gene Ontology termsGO:0000028 - ribosomal small subunit assembly (biological process)
GO:0002181 - cytoplasmic translation (biological process)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001865 - Ribosomal protein S2
IPR005707 - Ribosomal protein S2, eukaryotic/archaeal
IPR018130 - Ribosomal protein S2, conserved site
IPR023591 - Ribosomal protein S2, flavodoxin-like domain superfamily
IPR027498 - Ribosomal protein S2, eukaryotic


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004138372.1 40S ribosomal protein SA [Cucumis sativus]2.0e-17499.68Show/hide
Query:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAH
        MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAH
Subjt:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAH

Query:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
        AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
Subjt:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV

Query:  MVDLFFYREPEEAKEPEEEEALPPADFGIADYSAAPLTSDQWTSQIPDAQWGAADAIPPPAPVVPASGAEWAPEPVALAADGWDAAAAPPPPPAVSAEGT
        MVDLFFYREPEEAKEPEEEEALPPADFGIADYSAAPLTSDQWTSQIPDAQWGAADAIP PAPVVPASGAEWAPEPVALAADGWDAAAAPPPPPAVSAEGT
Subjt:  MVDLFFYREPEEAKEPEEEEALPPADFGIADYSAAPLTSDQWTSQIPDAQWGAADAIPPPAPVVPASGAEWAPEPVALAADGWDAAAAPPPPPAVSAEGT

Query:  APSSASWF
        APSSASWF
Subjt:  APSSASWF

XP_008463065.1 PREDICTED: 40S ribosomal protein SA-like [Cucumis melo]3.0e-17097.4Show/hide
Query:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAH
        MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAH
Subjt:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAH

Query:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
        AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
Subjt:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV

Query:  MVDLFFYREPEEAKEPEEEEALPPADFGIADYSAAPLTSDQWTSQIPDAQWGAADAIPPPAPVVPASGAEWAPEPVALAADGWDAAAAPPPPPAVSAEGT
        MVDLFFYREPEEAKEPEEEEALPPADFGIADYSAAPL SDQWTSQIPDAQWGAADA+PPPA VVPASGAEWAPEPVAL ADGWD AAAPPPPPA SA+GT
Subjt:  MVDLFFYREPEEAKEPEEEEALPPADFGIADYSAAPLTSDQWTSQIPDAQWGAADAIPPPAPVVPASGAEWAPEPVALAADGWDAAAAPPPPPAVSAEGT

Query:  APSSASWF
        AP+SASWF
Subjt:  APSSASWF

XP_022925394.1 40S ribosomal protein SA-like [Cucurbita moschata]1.8e-15188.35Show/hide
Query:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAH
        MATGAAP RQLSQKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKL +AARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TG H
Subjt:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAH

Query:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
        AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
Subjt:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV

Query:  MVDLFFYREPEEAKEPEEEEALPPADFGIADYSAAPL-TSDQWTSQIPDAQWGAADAIPPPAPVVPASGAEWAPEPVALAADGWDAAAAPPPPPAVSAEG
        MVDLFFYREPEEAKE EEEEALPP DFGIADY AAPL  SDQW +QI DAQWGAAD +P PA    AS  EWAPEPV LAA+ W+AA APPPP   +A+G
Subjt:  MVDLFFYREPEEAKEPEEEEALPPADFGIADYSAAPL-TSDQWTSQIPDAQWGAADAIPPPAPVVPASGAEWAPEPVALAADGWDAAAAPPPPPAVSAEG

Query:  TAPSSASWF
         APSSASWF
Subjt:  TAPSSASWF

XP_022932088.1 40S ribosomal protein SA-like [Cucurbita moschata]2.9e-14987.22Show/hide
Query:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAH
        MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQ+TGAH
Subjt:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAH

Query:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
        AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
Subjt:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV

Query:  MVDLFFYREPEEAKEPEEEEALPPADFGIADYSAAPL-TSDQWTSQIPDAQWGAADAIPP---PAPVVPASGAEWAPEPVALAADGWDAAAAPP-PPPAV
        MVDLFFYREPEEAKE EEEEALPP DFGIADY AAPL  SDQW++QIPDAQWGAAD + P    A + P S  EW  EP ALAADGWDAA APP   PAV
Subjt:  MVDLFFYREPEEAKEPEEEEALPPADFGIADYSAAPL-TSDQWTSQIPDAQWGAADAIPP---PAPVVPASGAEWAPEPVALAADGWDAAAAPP-PPPAV

Query:  SAEGTAPSSASWF
              PS+  W+
Subjt:  SAEGTAPSSASWF

XP_038886558.1 40S ribosomal protein SA-like [Benincasa hispida]2.7e-15591Show/hide
Query:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAH
        MATGAAPPRQL+QKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAH
Subjt:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAH

Query:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
        AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
Subjt:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV

Query:  MVDLFFYREPEEAKEPEEEEALPPADFGIADYSAAPLT-SDQWTSQIPDAQWGAADAIPPPAPVVPASGAEWAPEPVALAADGWDAAAAPPPPP--AVSA
        MVDLFFYREPEEAKEPEEEEALPP DFGIADY AAPL  +DQWT+QIPDAQWGA DA+ P A V PAS  EWA EPVALAADGWDAA  P P    AV+A
Subjt:  MVDLFFYREPEEAKEPEEEEALPPADFGIADYSAAPLT-SDQWTSQIPDAQWGAADAIPPPAPVVPASGAEWAPEPVALAADGWDAAAAPPPPP--AVSA

Query:  EGTAPSSASWF
            PSSASWF
Subjt:  EGTAPSSASWF

TrEMBL top hitse value%identityAlignment
A0A0A0K8X1 40S ribosomal protein SA9.7e-17599.68Show/hide
Query:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAH
        MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAH
Subjt:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAH

Query:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
        AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
Subjt:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV

Query:  MVDLFFYREPEEAKEPEEEEALPPADFGIADYSAAPLTSDQWTSQIPDAQWGAADAIPPPAPVVPASGAEWAPEPVALAADGWDAAAAPPPPPAVSAEGT
        MVDLFFYREPEEAKEPEEEEALPPADFGIADYSAAPLTSDQWTSQIPDAQWGAADAIP PAPVVPASGAEWAPEPVALAADGWDAAAAPPPPPAVSAEGT
Subjt:  MVDLFFYREPEEAKEPEEEEALPPADFGIADYSAAPLTSDQWTSQIPDAQWGAADAIPPPAPVVPASGAEWAPEPVALAADGWDAAAAPPPPPAVSAEGT

Query:  APSSASWF
        APSSASWF
Subjt:  APSSASWF

A0A1S3CJX7 40S ribosomal protein SA1.4e-17097.4Show/hide
Query:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAH
        MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAH
Subjt:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAH

Query:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
        AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
Subjt:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV

Query:  MVDLFFYREPEEAKEPEEEEALPPADFGIADYSAAPLTSDQWTSQIPDAQWGAADAIPPPAPVVPASGAEWAPEPVALAADGWDAAAAPPPPPAVSAEGT
        MVDLFFYREPEEAKEPEEEEALPPADFGIADYSAAPL SDQWTSQIPDAQWGAADA+PPPA VVPASGAEWAPEPVAL ADGWD AAAPPPPPA SA+GT
Subjt:  MVDLFFYREPEEAKEPEEEEALPPADFGIADYSAAPLTSDQWTSQIPDAQWGAADAIPPPAPVVPASGAEWAPEPVALAADGWDAAAAPPPPPAVSAEGT

Query:  APSSASWF
        AP+SASWF
Subjt:  APSSASWF

A0A5D3DUK0 40S ribosomal protein SA1.4e-17097.4Show/hide
Query:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAH
        MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAH
Subjt:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAH

Query:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
        AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
Subjt:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV

Query:  MVDLFFYREPEEAKEPEEEEALPPADFGIADYSAAPLTSDQWTSQIPDAQWGAADAIPPPAPVVPASGAEWAPEPVALAADGWDAAAAPPPPPAVSAEGT
        MVDLFFYREPEEAKEPEEEEALPPADFGIADYSAAPL SDQWTSQIPDAQWGAADA+PPPA VVPASGAEWAPEPVAL ADGWD AAAPPPPPA SA+GT
Subjt:  MVDLFFYREPEEAKEPEEEEALPPADFGIADYSAAPLTSDQWTSQIPDAQWGAADAIPPPAPVVPASGAEWAPEPVALAADGWDAAAAPPPPPAVSAEGT

Query:  APSSASWF
        AP+SASWF
Subjt:  APSSASWF

A0A6J1EC15 40S ribosomal protein SA8.8e-15288.35Show/hide
Query:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAH
        MATGAAP RQLSQKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKL +AARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TG H
Subjt:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAH

Query:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
        AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
Subjt:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV

Query:  MVDLFFYREPEEAKEPEEEEALPPADFGIADYSAAPL-TSDQWTSQIPDAQWGAADAIPPPAPVVPASGAEWAPEPVALAADGWDAAAAPPPPPAVSAEG
        MVDLFFYREPEEAKE EEEEALPP DFGIADY AAPL  SDQW +QI DAQWGAAD +P PA    AS  EWAPEPV LAA+ W+AA APPPP   +A+G
Subjt:  MVDLFFYREPEEAKEPEEEEALPPADFGIADYSAAPL-TSDQWTSQIPDAQWGAADAIPPPAPVVPASGAEWAPEPVALAADGWDAAAAPPPPPAVSAEG

Query:  TAPSSASWF
         APSSASWF
Subjt:  TAPSSASWF

A0A6J1I7P9 40S ribosomal protein SA8.8e-15288.35Show/hide
Query:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAH
        MATGAAP RQLSQKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKL +AARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TG H
Subjt:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAH

Query:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
        AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
Subjt:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV

Query:  MVDLFFYREPEEAKEPEEEEALPPADFGIADYSAAPL-TSDQWTSQIPDAQWGAADAIPPPAPVVPASGAEWAPEPVALAADGWDAAAAPPPPPAVSAEG
        MVDLFFYREPEEAKE EEEEALPP DFGIADY AAPL  SDQW +QI DAQWGAAD +P PA    AS  EWAPEPV LAA+ W+AA APPPP   +A+G
Subjt:  MVDLFFYREPEEAKEPEEEEALPPADFGIADYSAAPL-TSDQWTSQIPDAQWGAADAIPPPAPVVPASGAEWAPEPVALAADGWDAAAAPPPPPAVSAEG

Query:  TAPSSASWF
         APSSASWF
Subjt:  TAPSSASWF

SwissProt top hitse value%identityAlignment
A5BUU4 40S ribosomal protein SA1.5e-12776.83Show/hide
Query:  AAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAG
        A P R LSQKE DIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIV IENP+DIIVQSARPYGQRAVLKFAQ+TGAHAIAG
Subjt:  AAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAG

Query:  RHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVDL
        RHTPGTFTNQLQTSF+EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMR TI  GHKWDVMVDL
Subjt:  RHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVDL

Query:  FFYREPEEAKEPEEEEALPPADFGIADYSAAP---LTSDQWTSQIPDA-QWGAADAIPPPAPVVPASGAEWA-----PEPVALAADGWDAAAAPP---PP
        FFYREPEE KE E +E +   D+GI DY A     L    W + I DA QWGA   +P  AP+    G+ W      P  V +A DGWDAAAAPP   PP
Subjt:  FFYREPEEAKEPEEEEALPPADFGIADYSAAP---LTSDQWTSQIPDA-QWGAADAIPPPAPVVPASGAEWA-----PEPVALAADGWDAAAAPP---PP

Query:  PAVSAEGTAPSSASW
        P V  EG  P  A W
Subjt:  PAVSAEGTAPSSASW

O22518 40S ribosomal protein SA2.2e-12881.16Show/hide
Query:  AAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAG
        AAPPRQLSQKEADIQMMLAA+VHLGTKNCDFQMERY+FKRRNDGIYIINLGKTWEKLQLAARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGAHAIAG
Subjt:  AAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAG

Query:  RHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVDL
        RHTPGTFTNQLQTSF+EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIR G KWDVMVDL
Subjt:  RHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVDL

Query:  FFYREPEEAKEPEEEEALPPADFGIADYSAAPLTSD-QWTSQIPDAQWGAADAIPPPAPVVPASGAEWAPEPVALAADGWDAAAAPPPPPAV
        FFYREPEEAK+ EEEEA P  D+ I D++A  + +D QW   I D  W  +DA+P P P VP  G  W     A AA G D   A PPP  +
Subjt:  FFYREPEEAKEPEEEEALPPADFGIADYSAAPLTSD-QWTSQIPDAQWGAADAIPPPAPVVPASGAEWAPEPVALAADGWDAAAAPPPPPAV

O65751 40S ribosomal protein SA4.0e-12579.38Show/hide
Query:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAH
        MAT  AP RQL+QKEADIQMMLAA+VHLGTKNC+FQMERY+FKRRNDGIYIINLGKTW+KL LAAR+IV IEN QDIIVQSARPYGQRAVLKFAQ+TGAH
Subjt:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAH

Query:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
        AIAGRHTPGTFTNQLQTSF+EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPM YVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIR G KWDV
Subjt:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV

Query:  MVDLFFYREPEEAKEPEEEEALPPADFGIADYSAAPLTSD-QWTSQIPDAQWGAADAIPPPAPVVPASGAEWAPEPVALAADGWDAAAAPP
        MVDLFFYREPEEAK+PEE+E   P D+ IAD++ + + SD QW + I D  W   DA+P P P VPA    WA  P A+A D W  A  PP
Subjt:  MVDLFFYREPEEAKEPEEEEALPPADFGIADYSAAPLTSD-QWTSQIPDAQWGAADAIPPPAPVVPASGAEWAPEPVALAADGWDAAAAPP

O80377 40S ribosomal protein SA1.1e-12779.28Show/hide
Query:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAH
        MA+GA   R+LS  EADIQMM AAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL LAARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGAH
Subjt:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAH

Query:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
        AIAGRHTPGTFTNQLQTSF+EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRG I  GHKW+V
Subjt:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV

Query:  MVDLFFYREPEEAKEPEEEEALPPADFGIADYSAAPL-TSDQWTSQIPDAQWGAADAIPPPAPVVPASGAEWAPEPVALAADGWDAAAAPPPPPAVSAEG
        MVDLFFYREPEE K+ EEE+ LP  D+ +ADY+AAP+  +DQW + IPDAQWG  D + P    VPA    W  +   +A DGWDAAAAPP P AV  + 
Subjt:  MVDLFFYREPEEAKEPEEEEALPPADFGIADYSAAPL-TSDQWTSQIPDAQWGAADAIPPPAPVVPASGAEWAPEPVALAADGWDAAAAPPPPPAVSAEG

Query:  TAPS
         AP+
Subjt:  TAPS

Q08682 40S ribosomal protein Sa-13.3e-11974.83Show/hide
Query:  MAT-GAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGA
        MAT G+A   QLSQKEAD++MM AAEVHLGTKNC++QMERYVFKRRNDGIYI NLGKTWEKLQ+AARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGA
Subjt:  MAT-GAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGA

Query:  HAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWD
        +AIAGRHTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKE ALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI AG KWD
Subjt:  HAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWD

Query:  VMVDLFFYREPEEAKEPEEEEALPPADFG-IADYSAAPLTSDQW-TSQIPDAQW-GAADAIPPPAPVVPASGAEWAPEPVALAADGWDAAAAPPPPPAVS
        VMVDLFFYREPEE K  +E+EA P A++G +       +  DQW T+QIPDA W G   A   P    PA+ A W+    A A  GW+AAA P   PA  
Subjt:  VMVDLFFYREPEEAKEPEEEEALPPADFG-IADYSAAPLTSDQW-TSQIPDAQW-GAADAIPPPAPVVPASGAEWAPEPVALAADGWDAAAAPPPPPAVS

Query:  AE
         E
Subjt:  AE

Arabidopsis top hitse value%identityAlignment
AT1G72370.1 40s ribosomal protein SA2.3e-12074.83Show/hide
Query:  MAT-GAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGA
        MAT G+A   QLSQKEAD++MM AAEVHLGTKNC++QMERYVFKRRNDGIYI NLGKTWEKLQ+AARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGA
Subjt:  MAT-GAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGA

Query:  HAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWD
        +AIAGRHTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKE ALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI AG KWD
Subjt:  HAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWD

Query:  VMVDLFFYREPEEAKEPEEEEALPPADFG-IADYSAAPLTSDQW-TSQIPDAQW-GAADAIPPPAPVVPASGAEWAPEPVALAADGWDAAAAPPPPPAVS
        VMVDLFFYREPEE K  +E+EA P A++G +       +  DQW T+QIPDA W G   A   P    PA+ A W+    A A  GW+AAA P   PA  
Subjt:  VMVDLFFYREPEEAKEPEEEEALPPADFG-IADYSAAPLTSDQW-TSQIPDAQW-GAADAIPPPAPVVPASGAEWAPEPVALAADGWDAAAAPPPPPAVS

Query:  AE
         E
Subjt:  AE

AT1G72370.2 40s ribosomal protein SA7.4e-11974.5Show/hide
Query:  MAT-GAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGA
        MAT G+A   QLSQKEAD++MM AAEVHLGTKNC++QMERYVFKRRNDGIYI NLGKTWEKLQ+AARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGA
Subjt:  MAT-GAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGA

Query:  HAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWD
        +AIAGRHTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKE ALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI AG KWD
Subjt:  HAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWD

Query:  VMVDLFFYREPEEAKEPEEEEALPPADFG-IADYSAAPLTSDQW-TSQIPDAQW-GAADAIPPPAPVVPASGAEWAPEPVALAADGWDAAAAPPPPPAVS
        VMVDLFFYREPEE K  +E+EA P A++G +       +  DQW T+QIPDA W G   A   P    PA+ A W+      A  GW+AAA P   PA  
Subjt:  VMVDLFFYREPEEAKEPEEEEALPPADFG-IADYSAAPLTSDQW-TSQIPDAQW-GAADAIPPPAPVVPASGAEWAPEPVALAADGWDAAAAPPPPPAVS

Query:  AE
         E
Subjt:  AE

AT3G04770.1 40s ribosomal protein SA B5.3e-10186.93Show/hide
Query:  AAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAG
        A   RQ+S+KEADIQMML+A+VHLGTKNC++QMERYVFKRR+DGIYIINLGKTW+KLQ+AARVIV IENP+DIIVQSARPYGQRAVLKFAQ+TG +AIAG
Subjt:  AAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAG

Query:  RHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVD
        RHTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPM +VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI A  KWDVMV+
Subjt:  RHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVD

AT3G04770.2 40s ribosomal protein SA B2.9e-11574.13Show/hide
Query:  AAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAG
        A   RQ+S+KEADIQMML+A+VHLGTKNC++QMERYVFKRR+DGIYIINLGKTW+KLQ+AARVIV IENP+DIIVQSARPYGQRAVLKFAQ+TG +AIAG
Subjt:  AAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAG

Query:  RHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVDL
        RHTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPM +VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI A  KWDVMVDL
Subjt:  RHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVDL

Query:  FFYREPEEAKEPEEEEALPPADFGIADYSAAPLTSDQW-TSQIPDAQWGAADAIPPPAPVVPASGAEWAPEPVALAADGWDAAAAP
        FFYREPEEAK+  +EEA   AD+G+       +  DQW T+QI DA W  +  +  P    PA G       V +AA GW+AA+ P
Subjt:  FFYREPEEAKEPEEEEALPPADFGIADYSAAPLTSDQW-TSQIPDAQWGAADAIPPPAPVVPASGAEWAPEPVALAADGWDAAAAP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACCGGAGCTGCACCGCCTCGTCAACTCTCACAGAAGGAGGCCGACATTCAGATGATGTTGGCTGCCGAAGTTCATCTTGGCACAAAAAACTGCGATTTTCAAAT
GGAACGATATGTTTTTAAGCGCCGAAATGATGGAATCTACATCATTAACCTTGGGAAAACATGGGAGAAACTTCAGCTGGCTGCAAGAGTTATTGTGGGTATTGAGAATC
CTCAAGATATCATTGTTCAGTCTGCTCGACCCTATGGTCAGAGGGCTGTTTTGAAGTTCGCTCAGCACACTGGTGCTCATGCTATTGCTGGGAGGCACACTCCTGGAACA
TTCACCAACCAGCTTCAGACATCATTCAACGAGCCACGCCTGCTTATACTTACTGATCCTAGAACTGATCATCAGCCAATTAAGGAAGCTGCACTTGGTAACATTCCCAC
AATAGCCTTTTGTGACACTGATTCTCCAATGCGGTATGTTGATATTGGAATCCCGGCCAACAACAAGGGAAAACATAGCATAGGATGTTTGTTCTGGCTTTTGGCAAGGA
TGGTTCTACAAATGCGTGGGACAATTCGTGCTGGCCACAAATGGGATGTGATGGTGGATTTGTTTTTCTATCGTGAACCTGAGGAGGCTAAGGAGCCAGAAGAGGAAGAG
GCTCTTCCACCCGCAGATTTTGGCATTGCTGACTATAGTGCTGCTCCACTTACCTCAGACCAATGGACTTCACAAATTCCCGATGCCCAATGGGGTGCTGCAGATGCAAT
TCCTCCTCCTGCGCCTGTTGTACCTGCTTCCGGTGCTGAATGGGCTCCAGAGCCAGTTGCTTTGGCAGCAGATGGATGGGATGCCGCAGCAGCACCTCCGCCGCCGCCAG
CAGTTTCTGCTGAGGGAACGGCACCTTCCTCCGCCAGTTGGTTTTGA
mRNA sequenceShow/hide mRNA sequence
GAAGAAGGAAGAAGGAAGAAGGAAGAAGGAATTTATTAACTTAATTTATAGTCGAGGGCATTATAGTAATTTAGTAATCTAGGGTTTTTATGCATAAATATTAGTCTTCC
TCTTAACCTTCTTCAGTTGCAGCCGCCGAAGAGCTCCAAATCCTCTTTTCATTCACTTCATCGATTCCCAGATTCCGCCATGGCGACCGGAGCTGCACCGCCTCGTCAAC
TCTCACAGAAGGAGGCCGACATTCAGATGATGTTGGCTGCCGAAGTTCATCTTGGCACAAAAAACTGCGATTTTCAAATGGAACGATATGTTTTTAAGCGCCGAAATGAT
GGAATCTACATCATTAACCTTGGGAAAACATGGGAGAAACTTCAGCTGGCTGCAAGAGTTATTGTGGGTATTGAGAATCCTCAAGATATCATTGTTCAGTCTGCTCGACC
CTATGGTCAGAGGGCTGTTTTGAAGTTCGCTCAGCACACTGGTGCTCATGCTATTGCTGGGAGGCACACTCCTGGAACATTCACCAACCAGCTTCAGACATCATTCAACG
AGCCACGCCTGCTTATACTTACTGATCCTAGAACTGATCATCAGCCAATTAAGGAAGCTGCACTTGGTAACATTCCCACAATAGCCTTTTGTGACACTGATTCTCCAATG
CGGTATGTTGATATTGGAATCCCGGCCAACAACAAGGGAAAACATAGCATAGGATGTTTGTTCTGGCTTTTGGCAAGGATGGTTCTACAAATGCGTGGGACAATTCGTGC
TGGCCACAAATGGGATGTGATGGTGGATTTGTTTTTCTATCGTGAACCTGAGGAGGCTAAGGAGCCAGAAGAGGAAGAGGCTCTTCCACCCGCAGATTTTGGCATTGCTG
ACTATAGTGCTGCTCCACTTACCTCAGACCAATGGACTTCACAAATTCCCGATGCCCAATGGGGTGCTGCAGATGCAATTCCTCCTCCTGCGCCTGTTGTACCTGCTTCC
GGTGCTGAATGGGCTCCAGAGCCAGTTGCTTTGGCAGCAGATGGATGGGATGCCGCAGCAGCACCTCCGCCGCCGCCAGCAGTTTCTGCTGAGGGAACGGCACCTTCCTC
CGCCAGTTGGTTTTGAGAGAGGAAAAGTTTAAAGTTCCGTACCGAATTGTACTCTAATGGATTAATTATTATGAGTTTTCTTGTTTATTTAGGAATGACATCGGTCCTTT
TTGGTTGGAAAATTGATTTCTTTTTTTATAGTCCAGTTTTAGATTTTAAGATTGAATTTTCCGACTTCCATTACATATCTTAAGTCCCAACAAACAATATATTAATTTTG
GATGGCTAAAGGTGGCATGTTTTCTTTGAAAGTTTTGGTGAAGTGAGCGTAACAACTAGAGTCGAGTTAATAGTGGTTTAATCTTTTACGGGAATATTTGAACCTCAATA
TTTGATGTGTTTTGTGTTGTACTGATAATGTTAGAGATGTTCAATTTATCAATGGGATGGTGCCGTGGCATGAACATCAGTTCACTTAAATGATATTTTTTCATAAATAA
TGCA
Protein sequenceShow/hide protein sequence
MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGT
FTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEPEEEE
ALPPADFGIADYSAAPLTSDQWTSQIPDAQWGAADAIPPPAPVVPASGAEWAPEPVALAADGWDAAAAPPPPPAVSAEGTAPSSASWF