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CSPI06G02720 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G02720
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr6:2178959..2179231
RNA-Seq ExpressionCSPI06G02720
SyntenyCSPI06G02720
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646597.1 hypothetical protein Csa_005461 [Cucumis sativus]1.2e-1869.32Show/hide
Query:  DTMSVVANVCKRVLVTVLCGIFVLLVSHTIAVFALFLIVLPFGKVDGTSMGVAFVFYFVGLLCLVVVLQLAGVVSILEEFCGFKAMGE
        DTMSVV  V KR+LVT LC I V L+ H I   ALF+I+LP G VD T++GVAFVFYFVGLL LVVVLQLAGVVS+LEE  GFKAM +
Subjt:  DTMSVVANVCKRVLVTVLCGIFVLLVSHTIAVFALFLIVLPFGKVDGTSMGVAFVFYFVGLLCLVVVLQLAGVVSILEEFCGFKAMGE

KGN45907.2 hypothetical protein Csa_005633 [Cucumis sativus]2.6e-37100Show/hide
Query:  MDTMSVVANVCKRVLVTVLCGIFVLLVSHTIAVFALFLIVLPFGKVDGTSMGVAFVFYFVGLLCLVVVLQLAGVVSILEEFCGFKAMGEE
        MDTMSVVANVCKRVLVTVLCGIFVLLVSHTIAVFALFLIVLPFGKVDGTSMGVAFVFYFVGLLCLVVVLQLAGVVSILEEFCGFKAMGEE
Subjt:  MDTMSVVANVCKRVLVTVLCGIFVLLVSHTIAVFALFLIVLPFGKVDGTSMGVAFVFYFVGLLCLVVVLQLAGVVSILEEFCGFKAMGEE

XP_011658385.2 uncharacterized protein LOC105435982 [Cucumis sativus]1.2e-1869.32Show/hide
Query:  DTMSVVANVCKRVLVTVLCGIFVLLVSHTIAVFALFLIVLPFGKVDGTSMGVAFVFYFVGLLCLVVVLQLAGVVSILEEFCGFKAMGE
        DTMSVV  V KR+LVT LC I V L+ H I   ALF+I+LP G VD T++GVAFVFYFVGLL LVVVLQLAGVVS+LEE  GFKAM +
Subjt:  DTMSVVANVCKRVLVTVLCGIFVLLVSHTIAVFALFLIVLPFGKVDGTSMGVAFVFYFVGLLCLVVVLQLAGVVSILEEFCGFKAMGE

XP_038885959.1 uncharacterized protein LOC120076262 [Benincasa hispida]9.2e-1969.32Show/hide
Query:  DTMSVVANVCKRVLVTVLCGIFVLLVSHTIAVFALFLIVLPFGKVDGTSMGVAFVFYFVGLLCLVVVLQLAGVVSILEEFCGFKAMGE
        DTM+VVA V KRVLVT +C + V LV H IA FAL+LIVLP GK+D T+ GVAFVFYFVG L LVVV QLAGVVS+LEE  GFKA+ +
Subjt:  DTMSVVANVCKRVLVTVLCGIFVLLVSHTIAVFALFLIVLPFGKVDGTSMGVAFVFYFVGLLCLVVVLQLAGVVSILEEFCGFKAMGE

XP_038885960.1 uncharacterized protein LOC120076263 [Benincasa hispida]3.7e-2071.59Show/hide
Query:  DTMSVVANVCKRVLVTVLCGIFVLLVSHTIAVFALFLIVLPFGKVDGTSMGVAFVFYFVGLLCLVVVLQLAGVVSILEEFCGFKAMGE
        DTMS+VA V KRVLVT LC + V LV H IA FA FLIVLPFGKVD  +  VAFVFYFVGLL LVV  QLAGVVS+LEE CGFKA+ +
Subjt:  DTMSVVANVCKRVLVTVLCGIFVLLVSHTIAVFALFLIVLPFGKVDGTSMGVAFVFYFVGLLCLVVVLQLAGVVSILEEFCGFKAMGE

TrEMBL top hitse value%identityAlignment
A0A0A0K815 Uncharacterized protein1.2e-37100Show/hide
Query:  MDTMSVVANVCKRVLVTVLCGIFVLLVSHTIAVFALFLIVLPFGKVDGTSMGVAFVFYFVGLLCLVVVLQLAGVVSILEEFCGFKAMGEE
        MDTMSVVANVCKRVLVTVLCGIFVLLVSHTIAVFALFLIVLPFGKVDGTSMGVAFVFYFVGLLCLVVVLQLAGVVSILEEFCGFKAMGEE
Subjt:  MDTMSVVANVCKRVLVTVLCGIFVLLVSHTIAVFALFLIVLPFGKVDGTSMGVAFVFYFVGLLCLVVVLQLAGVVSILEEFCGFKAMGEE

A0A0A0K819 Uncharacterized protein5.8e-1969.32Show/hide
Query:  DTMSVVANVCKRVLVTVLCGIFVLLVSHTIAVFALFLIVLPFGKVDGTSMGVAFVFYFVGLLCLVVVLQLAGVVSILEEFCGFKAMGE
        DTMSVV  V KR+LVT LC I V L+ H I   ALF+I+LP G VD T++GVAFVFYFVGLL LVVVLQLAGVVS+LEE  GFKAM +
Subjt:  DTMSVVANVCKRVLVTVLCGIFVLLVSHTIAVFALFLIVLPFGKVDGTSMGVAFVFYFVGLLCLVVVLQLAGVVSILEEFCGFKAMGE

A0A0A0KJQ4 Uncharacterized protein2.2e-1867.44Show/hide
Query:  DTMSVVANVCKRVLVTVLCGIFVLLVSHTIAVFALFLIVLPFGKVDGTSMGVAFVFYFVGLLCLVVVLQLAGVVSILEEFCGFKAM
        DTMSVV  V KR+LVT LC I V L+ H I   ALF+I+LP G+VD T++GVAF+FYF+GL  LVVVLQLAGVVS+LEE  GFKAM
Subjt:  DTMSVVANVCKRVLVTVLCGIFVLLVSHTIAVFALFLIVLPFGKVDGTSMGVAFVFYFVGLLCLVVVLQLAGVVSILEEFCGFKAM

A0A1S3CMT6 uncharacterized protein LOC1035022621.3e-1867.05Show/hide
Query:  DTMSVVANVCKRVLVTVLCGIFVLLVSHTIAVFALFLIVLPFGKVDGTSMGVAFVFYFVGLLCLVVVLQLAGVVSILEEFCGFKAMGE
        D MSVV  V KR+LVT LC I V  + H I   ALF+I+LP GKVD T++GVAFVFYFVGLL LVVVLQL+GVVS+LEE  GFKAM +
Subjt:  DTMSVVANVCKRVLVTVLCGIFVLLVSHTIAVFALFLIVLPFGKVDGTSMGVAFVFYFVGLLCLVVVLQLAGVVSILEEFCGFKAMGE

A0A5D3DZ60 Putative transmembrane protein1.3e-1867.05Show/hide
Query:  DTMSVVANVCKRVLVTVLCGIFVLLVSHTIAVFALFLIVLPFGKVDGTSMGVAFVFYFVGLLCLVVVLQLAGVVSILEEFCGFKAMGE
        D MSVV  V KR+LVT LC I V  + H I   ALF+I+LP GKVD T++GVAFVFYFVGLL LVVVLQL+GVVS+LEE  GFKAM +
Subjt:  DTMSVVANVCKRVLVTVLCGIFVLLVSHTIAVFALFLIVLPFGKVDGTSMGVAFVFYFVGLLCLVVVLQLAGVVSILEEFCGFKAMGE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACACCATGAGCGTCGTAGCCAATGTTTGTAAACGAGTTCTCGTCACAGTTCTTTGTGGTATTTTTGTTTTGTTGGTTTCTCATACTATTGCTGTGTTTGCATTGTT
CTTGATTGTCTTGCCATTTGGGAAAGTTGATGGAACATCAATGGGTGTGGCTTTCGTTTTTTACTTTGTTGGGTTGTTGTGTTTGGTAGTGGTGTTACAATTGGCTGGTG
TTGTTTCTATTTTGGAAGAGTTTTGTGGGTTTAAAGCCATGGGCGAAGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGACACCATGAGCGTCGTAGCCAATGTTTGTAAACGAGTTCTCGTCACAGTTCTTTGTGGTATTTTTGTTTTGTTGGTTTCTCATACTATTGCTGTGTTTGCATTGTT
CTTGATTGTCTTGCCATTTGGGAAAGTTGATGGAACATCAATGGGTGTGGCTTTCGTTTTTTACTTTGTTGGGTTGTTGTGTTTGGTAGTGGTGTTACAATTGGCTGGTG
TTGTTTCTATTTTGGAAGAGTTTTGTGGGTTTAAAGCCATGGGCGAAGAGTAG
Protein sequenceShow/hide protein sequence
MDTMSVVANVCKRVLVTVLCGIFVLLVSHTIAVFALFLIVLPFGKVDGTSMGVAFVFYFVGLLCLVVVLQLAGVVSILEEFCGFKAMGEE