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CSPI06G03240 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G03240
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr6:2860305..2861171
RNA-Seq ExpressionCSPI06G03240
SyntenyCSPI06G03240
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063931.1 putative Clavata3/esr-related 43 [Cucumis melo var. makuwa]2.5e-3588.37Show/hide
Query:  MYDGSATPSRRRRLLSYFFIMFFFIWVVVGNQAARTIARPLRERENPDMGAVGSKEKYFNGRRSLGSREFEENKRTVPSCPDPLHN
        MYD  ATPSRRRRLLSYFFI+ FFIWVVVGNQAA  +ARPL E ENPDMGAVGSKEKYFNG RSLGSREFEENKRTVPSCPDPLHN
Subjt:  MYDGSATPSRRRRLLSYFFIMFFFIWVVVGNQAARTIARPLRERENPDMGAVGSKEKYFNGRRSLGSREFEENKRTVPSCPDPLHN

KAG6579278.1 CLAVATA3/ESR (CLE)-related protein 27, partial [Cucurbita argyrosperma subsp. sororia]1.2e-1857.84Show/hide
Query:  MVGFPAMYDGSAT-PSRRRRLLSYFFIMFFFIWVVV--GNQAARTIARPLRERENPDM---GAVGSKEK----YFNGRRSLGSREFEENKRTVPSCPDPL
        MV FPAM  G AT P RRRR LS FF++ FFIWVV       A  +ARP    + P+    G  GSKEK    YFNG RS GSR F+E KRTVPSCPDPL
Subjt:  MVGFPAMYDGSAT-PSRRRRLLSYFFIMFFFIWVVV--GNQAARTIARPLRERENPDM---GAVGSKEK----YFNGRRSLGSREFEENKRTVPSCPDPL

Query:  HN
        HN
Subjt:  HN

KAG6601785.1 CLAVATA3/ESR (CLE)-related protein 27, partial [Cucurbita argyrosperma subsp. sororia]1.4e-1150.55Show/hide
Query:  GSATPSRRRRLLSYFFIMFFFIWVVVGNQAARTIARPLRERENPDM----GAVGSKE----KYFNGRRSLGSREFEENKRTVPSCPDPLHN
        G  TP+R+RR LS   +M  FIWVV  +Q     AR   E   P+     G  GSKE    KYFNG R      FE+NKRTVPSCPDPLHN
Subjt:  GSATPSRRRRLLSYFFIMFFFIWVVVGNQAARTIARPLRERENPDM----GAVGSKE----KYFNGRRSLGSREFEENKRTVPSCPDPLHN

KAG7016789.1 hypothetical protein SDJN02_21899, partial [Cucurbita argyrosperma subsp. argyrosperma]5.7e-1655.43Show/hide
Query:  GSATPSRRRRLLSYFFIMFFFIWVVV--GNQAARTIARPLRERENPDM---GAVGSKEK----YFNGRRSLGSREFEENKRTVPSCPDPLHN
        G+  P RRRR LS FF++ FFIWVV       A  +ARP    + P+    G  GSKEK    YFNG RS GSR F+E KRTVPSCPDPLHN
Subjt:  GSATPSRRRRLLSYFFIMFFFIWVVV--GNQAARTIARPLRERENPDM---GAVGSKEK----YFNGRRSLGSREFEENKRTVPSCPDPLHN

PLY91246.1 hypothetical protein LSAT_3X59220 [Lactuca sativa]1.0e-0442.05Show/hide
Query:  PSRRRRLLSYFFIMF--FFIWVVVGNQAA--RTIARPLRERENPDMGAVGSKE---KYFNGR--RSLGSREFEENKRTVPSCPDPLHN
        P RRR  L   FI+F    IW++  +  +   T   P      PD  AV   E   K+FNGR       + F+ENKR VPSCPDPLHN
Subjt:  PSRRRRLLSYFFIMF--FFIWVVVGNQAA--RTIARPLRERENPDMGAVGSKE---KYFNGR--RSLGSREFEENKRTVPSCPDPLHN

TrEMBL top hitse value%identityAlignment
A0A2J6LV71 Uncharacterized protein4.9e-0542.05Show/hide
Query:  PSRRRRLLSYFFIMF--FFIWVVVGNQAA--RTIARPLRERENPDMGAVGSKE---KYFNGR--RSLGSREFEENKRTVPSCPDPLHN
        P RRR  L   FI+F    IW++  +  +   T   P      PD  AV   E   K+FNGR       + F+ENKR VPSCPDPLHN
Subjt:  PSRRRRLLSYFFIMF--FFIWVVVGNQAA--RTIARPLRERENPDMGAVGSKE---KYFNGR--RSLGSREFEENKRTVPSCPDPLHN

A0A5A7VDX3 Putative Clavata3/esr-related 431.2e-3588.37Show/hide
Query:  MYDGSATPSRRRRLLSYFFIMFFFIWVVVGNQAARTIARPLRERENPDMGAVGSKEKYFNGRRSLGSREFEENKRTVPSCPDPLHN
        MYD  ATPSRRRRLLSYFFI+ FFIWVVVGNQAA  +ARPL E ENPDMGAVGSKEKYFNG RSLGSREFEENKRTVPSCPDPLHN
Subjt:  MYDGSATPSRRRRLLSYFFIMFFFIWVVVGNQAARTIARPLRERENPDMGAVGSKEKYFNGRRSLGSREFEENKRTVPSCPDPLHN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGGTTTTCCTGCAATGTACGACGGCAGCGCCACTCCCTCACGTCGGCGGCGACTTCTCTCATATTTCTTCATAATGTTTTTCTTCATCTGGGTGGTGGTCGGCAA
CCAAGCAGCCAGAACTATCGCTAGACCGTTACGGGAAAGGGAAAATCCAGATATGGGGGCTGTCGGAAGCAAGGAGAAGTATTTCAATGGAAGAAGAAGTTTGGGTTCAA
GAGAGTTTGAAGAGAACAAACGAACGGTCCCCAGCTGCCCCGATCCTCTGCATAACTAG
mRNA sequenceShow/hide mRNA sequence
CTACTCCCCCCTCAAACACACTCTCTCTCTTTCTGTCTCCATCTTTCTCTCTCTAGCCGTTAATCGTCAACTCAATTGCCCATATAACTTTCTGAATCAAGCCCCATCCA
TAATTTATAAATTATCATCAAATCCAAATCCCATTAACCATTCCAAAAGGAAACAATCCCAATGGTGGGTTTTCCTGCAATGTACGACGGCAGCGCCACTCCCTCACGTC
GGCGGCGACTTCTCTCATATTTCTTCATAATGTTTTTCTTCATCTGGGTGGTGGTCGGCAACCAAGCAGCCAGAACTATCGCTAGACCGTTACGGGAAAGGGAAAATCCA
GATATGGGGGCTGTCGGAAGCAAGGAGAAGTATTTCAATGGAAGAAGAAGTTTGGGTTCAAGAGAGTTTGAAGAGAACAAACGAACGGTCCCCAGCTGCCCCGATCCTCT
GCATAACTAGTACAATAGTTTTTGTGTTTTTTGTTACTTCTTTTTCCCAAAAATACCCATGGTTTTCTTTTTCTTTTTTCTTTTGTGATTGTGAAAAACAGAGGGTATTT
TGGGACTGTTAATTTAGAGTATGTTATTATGAATGAAAGGGAAAAAGAACGGAGGGTTTTTGATTTGTACAGAAAAGTAGAAAATCGGAAATACTACTTTTGGAGAAATT
TGGCAGAGGAGAAAGAAGAGGAAGAATGGCAGAGATGCGATTTGCAATCACAGAATCGTGTCTTTTTTATTTATTCATATATATAATTTTATTTTGGCAGATTAATATAA
AAGAAAGAGAGAGAGATAGTACGCATTTTATTTTTCATAATTATTGCATATATATATTTAAAAAAGTGAAAGTTTTTTGTCCTGTGTCCTGCGAAGG
Protein sequenceShow/hide protein sequence
MVGFPAMYDGSATPSRRRRLLSYFFIMFFFIWVVVGNQAARTIARPLRERENPDMGAVGSKEKYFNGRRSLGSREFEENKRTVPSCPDPLHN