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CSPI06G03400 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G03400
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionpolcalcin Syr v 3-like
Genome locationChr6:3050052..3050303
RNA-Seq ExpressionCSPI06G03400
SyntenyCSPI06G03400
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646616.1 hypothetical protein Csa_005682 [Cucumis sativus]5.8e-3698.73Show/hide
Query:  MADSDGNKMECERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGYISLEELCDFQRANPDLMKE
        MADSDGN+MECERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGYISLEELCDFQRANPDLMKE
Subjt:  MADSDGNKMECERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGYISLEELCDFQRANPDLMKE

XP_008445690.1 PREDICTED: polcalcin Syr v 3-like [Cucumis melo]2.0e-3695.24Show/hide
Query:  MADSDGNKMECERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGYISLEELCDFQRANPDLMKEVCKRL
        MADSDG KMECERIFKRFD+NGDGKISLSELE ALHALGSSAPEEVGRRMSEIDKDGNG+ISLEELCDFQRANPDLMKEVCKRL
Subjt:  MADSDGNKMECERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGYISLEELCDFQRANPDLMKEVCKRL

XP_022150429.1 polcalcin Syr v 3-like [Momordica charantia]3.3e-3184.52Show/hide
Query:  MADSDGNKMECERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGYISLEELCDFQRANPDLMKEVCKRL
        MAD   N+ ECERIF RFD NGDG+ISLSELE+AL ALGSS+PEEV RRMSEIDKDG+GYISLEELCDFQRANPDLMKEVCKRL
Subjt:  MADSDGNKMECERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGYISLEELCDFQRANPDLMKEVCKRL

XP_022929895.1 polcalcin Phl p 7-like [Cucurbita moschata]1.9e-3183.33Show/hide
Query:  MADSDGNKMECERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGYISLEELCDFQRANPDLMKEVCKRL
        MA+S+  + ECERIF RFD NGDGKISLSELE ALHALGSS+PEEV RRMSEIDKDGNG+ISL+ELC+FQRANPDLMKEVCKRL
Subjt:  MADSDGNKMECERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGYISLEELCDFQRANPDLMKEVCKRL

XP_038886760.1 polcalcin Phl p 7-like [Benincasa hispida]2.3e-3285.71Show/hide
Query:  MADSDGNKMECERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGYISLEELCDFQRANPDLMKEVCKRL
        MADS+G + ECERIFKRFD +GDGKISLSELE+AL ALGSS+PEEV RRMSEIDKDGNG+ISL+ELCDFQRANPDLMKEVCKRL
Subjt:  MADSDGNKMECERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGYISLEELCDFQRANPDLMKEVCKRL

TrEMBL top hitse value%identityAlignment
A0A0A0KAW9 Uncharacterized protein2.1e-3998.81Show/hide
Query:  MADSDGNKMECERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGYISLEELCDFQRANPDLMKEVCKRL
        MADSDGN+MECERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGYISLEELCDFQRANPDLMKEVCKRL
Subjt:  MADSDGNKMECERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGYISLEELCDFQRANPDLMKEVCKRL

A0A1S3BDB5 polcalcin Syr v 3-like9.7e-3795.24Show/hide
Query:  MADSDGNKMECERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGYISLEELCDFQRANPDLMKEVCKRL
        MADSDG KMECERIFKRFD+NGDGKISLSELE ALHALGSSAPEEVGRRMSEIDKDGNG+ISLEELCDFQRANPDLMKEVCKRL
Subjt:  MADSDGNKMECERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGYISLEELCDFQRANPDLMKEVCKRL

A0A5A7V7E6 Polcalcin Syr v 3-like9.7e-3795.24Show/hide
Query:  MADSDGNKMECERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGYISLEELCDFQRANPDLMKEVCKRL
        MADSDG KMECERIFKRFD+NGDGKISLSELE ALHALGSSAPEEVGRRMSEIDKDGNG+ISLEELCDFQRANPDLMKEVCKRL
Subjt:  MADSDGNKMECERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGYISLEELCDFQRANPDLMKEVCKRL

A0A6J1DA15 polcalcin Syr v 3-like1.6e-3184.52Show/hide
Query:  MADSDGNKMECERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGYISLEELCDFQRANPDLMKEVCKRL
        MAD   N+ ECERIF RFD NGDG+ISLSELE+AL ALGSS+PEEV RRMSEIDKDG+GYISLEELCDFQRANPDLMKEVCKRL
Subjt:  MADSDGNKMECERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGYISLEELCDFQRANPDLMKEVCKRL

A0A6J1EVJ6 polcalcin Phl p 7-like9.4e-3283.33Show/hide
Query:  MADSDGNKMECERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGYISLEELCDFQRANPDLMKEVCKRL
        MA+S+  + ECERIF RFD NGDGKISLSELE ALHALGSS+PEEV RRMSEIDKDGNG+ISL+ELC+FQRANPDLMKEVCKRL
Subjt:  MADSDGNKMECERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGYISLEELCDFQRANPDLMKEVCKRL

SwissProt top hitse value%identityAlignment
O81092 Polcalcin Ole e 32.0e-1859.76Show/hide
Query:  MADSDGNKMECERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGYISLEELCDFQRANPDLMKEVCK
        MAD      E ERIFKRFD NGDGKIS SEL   L  LGS  PEE+ R M+EID DG+G+IS EE   F RAN  L+K+V K
Subjt:  MADSDGNKMECERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGYISLEELCDFQRANPDLMKEVCK

O82040 Polcalcin Phl p 75.7e-1861.64Show/hide
Query:  ECERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGYISLEELCDFQRANPDLMKEVCK
        + ERIFKRFD NGDGKISLSEL  AL  LGS++ +EV R M+EID DG+G+I   E   F  ANP LMK+V K
Subjt:  ECERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGYISLEELCDFQRANPDLMKEVCK

P58171 Polcalcin Syr v 31.1e-1864.38Show/hide
Query:  ECERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGYISLEELCDFQRANPDLMKEVCK
        E ERIFKRFD NGDGKIS SEL   L  LGS  PEE+ R M+EID DG+G+IS EE  DF RAN  L+K+V K
Subjt:  ECERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGYISLEELCDFQRANPDLMKEVCK

Q39419 Polcalcin Bet v 42.6e-1858.75Show/hide
Query:  DSDGNKMECERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGYISLEELCDFQRANPDLMKEVCK
        D   +K E ERIFKRFD NGDGKIS +EL  AL  LGS  P+EV   M+EID DG+G+IS +E  DF RAN  L+K+V K
Subjt:  DSDGNKMECERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGYISLEELCDFQRANPDLMKEVCK

Q84V36 Polcalcin Che a 35.7e-1864.79Show/hide
Query:  ERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGYISLEELCDFQRANPDLMKEVCK
        ERIFKRFD NGDGKIS SEL  AL  LGS  P+EV R M+EID DG+G+IS +E  DF RAN  L+K+V K
Subjt:  ERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGYISLEELCDFQRANPDLMKEVCK

Arabidopsis top hitse value%identityAlignment
AT1G24620.1 EF hand calcium-binding protein family3.1e-1147.76Show/hide
Query:  ECERIFKRFDVNGDGKISLSELEAALHALGSSAP-EEVGRRMSEIDKDGNGYISLEELCDFQRANPD
        E E +FK+FDVNGDGKIS  EL A + +LG   P EE+ + ++EID+ G+GYI+ EE  +      D
Subjt:  ECERIFKRFDVNGDGKISLSELEAALHALGSSAP-EEVGRRMSEIDKDGNGYISLEELCDFQRANPD

AT1G73630.1 EF hand calcium-binding protein family5.0e-0943.94Show/hide
Query:  MECERIFKRFDVNGDGKISLSELEAALHALGSS-APEEVGRRMSEIDKDGNGYISLEELCDFQRAN
        ME +++F +FD NGDGKIS+SEL     ++G+S   EE+ R + EID D +G+I+ EE     R++
Subjt:  MECERIFKRFDVNGDGKISLSELEAALHALGSS-APEEVGRRMSEIDKDGNGYISLEELCDFQRAN

AT3G03430.1 Calcium-binding EF-hand family protein4.5e-1857.32Show/hide
Query:  MADSDGNKMECERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGYISLEELCDFQRANPDLMKEVCK
        MAD+   K E +RIFK+FD NGDGKIS +EL  AL  LGS   E++ R M+EID DG+GYIS +E  DF  AN  LMK+V K
Subjt:  MADSDGNKMECERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGYISLEELCDFQRANPDLMKEVCK

AT5G17480.1 pollen calcium-binding protein 15.9e-1857.32Show/hide
Query:  MADSDGNKMECERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGYISLEELCDFQRANPDLMKEVCK
        MAD+   K E +RIFK+FD NGDGKIS +ELE AL  LGS   ++V R M+EID DG+G IS +E  DF  AN  LMK+V K
Subjt:  MADSDGNKMECERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGYISLEELCDFQRANPDLMKEVCK

AT5G37770.1 EF hand calcium-binding protein family5.9e-1047.54Show/hide
Query:  GNKMECERIFKRFDVNGDGKISLSELEAALHALGSSA-PEEVGRRMSEIDKDGNGYISLEE
        G+  + +++F+RFD NGDGKIS+ EL+  + AL  +A PEE    M + D DGNG+I L+E
Subjt:  GNKMECERIFKRFDVNGDGKISLSELEAALHALGSSA-PEEVGRRMSEIDKDGNGYISLEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGACTCAGATGGAAACAAAATGGAATGCGAGCGAATCTTTAAGCGGTTCGATGTCAACGGCGACGGAAAGATCTCGCTATCGGAGCTTGAGGCCGCTCTGCACGC
CCTTGGCTCCTCCGCGCCGGAAGAGGTTGGACGACGAATGTCGGAGATCGACAAGGACGGAAACGGTTACATTTCGCTTGAGGAACTCTGTGATTTTCAGAGGGCTAATC
CTGATTTGATGAAGGAGGTTTGCAAGAGGCTT
mRNA sequenceShow/hide mRNA sequence
ATGGCAGACTCAGATGGAAACAAAATGGAATGCGAGCGAATCTTTAAGCGGTTCGATGTCAACGGCGACGGAAAGATCTCGCTATCGGAGCTTGAGGCCGCTCTGCACGC
CCTTGGCTCCTCCGCGCCGGAAGAGGTTGGACGACGAATGTCGGAGATCGACAAGGACGGAAACGGTTACATTTCGCTTGAGGAACTCTGTGATTTTCAGAGGGCTAATC
CTGATTTGATGAAGGAGGTTTGCAAGAGGCTT
Protein sequenceShow/hide protein sequence
MADSDGNKMECERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGYISLEELCDFQRANPDLMKEVCKRL