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CSPI06G03520 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G03520
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr6:3183657..3184624
RNA-Seq ExpressionCSPI06G03520
SyntenyCSPI06G03520
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033089.1 uncharacterized protein E6C27_scaffold269G002160 [Cucumis melo var. makuwa]8.6e-1144.44Show/hide
Query:  DNDDEEEFLSGESPIRASTNSLLLHTSVHAEVGENC---------------------LLRVGLHL----ELG-VVFWL--------LSTQHGRRTELTAL
        DNDDEEEFLSGESPIRASTNSLLLHTSV+AE    C                      +RV L       LG ++ WL         STQHGRR ELT L
Subjt:  DNDDEEEFLSGESPIRASTNSLLLHTSVHAEVGENC---------------------LLRVGLHL----ELG-VVFWL--------LSTQHGRRTELTAL

Query:  YQFMIGFSFHDELEVFSCSGLSTNLVEMSGAPADL
        YQ +                   NLVEMS   ADL
Subjt:  YQFMIGFSFHDELEVFSCSGLSTNLVEMSGAPADL
KGN45991.1 hypothetical protein Csa_005715 [Cucumis sativus]1.9e-1097.44Show/hide
Query:  MDEEKKGDNDDEEEFLSGESPIRASTNSLLLHTSVHAEV
        MDEEKKGDNDDEEEFLSGESPIRASTNSLLLHTSVHAE+
Subjt:  MDEEKKGDNDDEEEFLSGESPIRASTNSLLLHTSVHAEV
TrEMBL top hitse value%identityAlignment
A0A0A0KE21 Uncharacterized protein9.3e-1197.44Show/hide
Query:  MDEEKKGDNDDEEEFLSGESPIRASTNSLLLHTSVHAEV
        MDEEKKGDNDDEEEFLSGESPIRASTNSLLLHTSVHAE+
Subjt:  MDEEKKGDNDDEEEFLSGESPIRASTNSLLLHTSVHAEV
A0A5A7SV80 Uncharacterized protein4.2e-1144.44Show/hide
Query:  DNDDEEEFLSGESPIRASTNSLLLHTSVHAEVGENC---------------------LLRVGLHL----ELG-VVFWL--------LSTQHGRRTELTAL
        DNDDEEEFLSGESPIRASTNSLLLHTSV+AE    C                      +RV L       LG ++ WL         STQHGRR ELT L
Subjt:  DNDDEEEFLSGESPIRASTNSLLLHTSVHAEVGENC---------------------LLRVGLHL----ELG-VVFWL--------LSTQHGRRTELTAL

Query:  YQFMIGFSFHDELEVFSCSGLSTNLVEMSGAPADL
        YQ +                   NLVEMS   ADL
Subjt:  YQFMIGFSFHDELEVFSCSGLSTNLVEMSGAPADL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGAAGAAAAAAAAGGTGACAACGACGATGAAGAAGAATTTCTCAGTGGTGAGAGCCCCATCAGAGCTTCCACCAACAGCCTTTTGCTTCACACCTCTGTACATGC
TGAGGTGGGGGAGAATTGTCTGCTTCGTGTTGGTTTGCATCTTGAACTTGGAGTTGTTTTCTGGCTTCTTTCCACACAGCATGGCAGAAGAACCGAACTTACTGCCTTGT
ACCAATTTATGATTGGTTTTTCTTTTCATGATGAATTGGAGGTGTTTTCTTGTTCTGGATTGAGTACTAACTTAGTTGAGATGTCCGGTGCGCCGGCTGATCTCCAATCC
TAG
mRNA sequenceShow/hide mRNA sequence
ATGGATGAAGAAAAAAAAGGTGACAACGACGATGAAGAAGAATTTCTCAGTGGTGAGAGCCCCATCAGAGCTTCCACCAACAGCCTTTTGCTTCACACCTCTGTACATGC
TGAGGTGGGGGAGAATTGTCTGCTTCGTGTTGGTTTGCATCTTGAACTTGGAGTTGTTTTCTGGCTTCTTTCCACACAGCATGGCAGAAGAACCGAACTTACTGCCTTGT
ACCAATTTATGATTGGTTTTTCTTTTCATGATGAATTGGAGGTGTTTTCTTGTTCTGGATTGAGTACTAACTTAGTTGAGATGTCCGGTGCGCCGGCTGATCTCCAATCC
TAG
Protein sequenceShow/hide protein sequence
MDEEKKGDNDDEEEFLSGESPIRASTNSLLLHTSVHAEVGENCLLRVGLHLELGVVFWLLSTQHGRRTELTALYQFMIGFSFHDELEVFSCSGLSTNLVEMSGAPADLQS