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CSPI06G03760 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G03760
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptiontrihelix transcription factor GT-2
Genome locationChr6:3498495..3498698
RNA-Seq ExpressionCSPI06G03760
SyntenyCSPI06G03760
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607678.1 Trihelix transcription factor GT-2, partial [Cucurbita argyrosperma subsp. sororia]2.3e-0663.79Show/hide
Query:  MLGDSTTSVLGGGAGGDSAVPATTTHRQDGLIVDM--------DENNNNSGEDERGRS
        MLGDSTTSVLGGGAG DSAVP  TT++QDGL+ D+        ++NN   GEDERGRS
Subjt:  MLGDSTTSVLGGGAGGDSAVPATTTHRQDGLIVDM--------DENNNNSGEDERGRS

XP_004140891.1 trihelix transcription factor GT-2 [Cucumis sativus]3.4e-18100Show/hide
Query:  MLGDSTTSVLGGGAGGDSAVPATTTHRQDGLIVDMDENNNNSGEDERGRSS
        MLGDSTTSVLGGGAGGDSAVPATTTHRQDGLIVDMDENNNNSGEDERGRSS
Subjt:  MLGDSTTSVLGGGAGGDSAVPATTTHRQDGLIVDMDENNNNSGEDERGRSS

XP_008445774.1 PREDICTED: trihelix transcription factor GT-2 [Cucumis melo]4.6e-1590.2Show/hide
Query:  MLGDSTTSVLGGGAGGDSAVPATTTHRQDGLIVDMDENNNNSGEDERGRSS
        MLGDS TSVLGGGAGGD+AVPATTT RQDGL+ DMDENNNNSGEDERGRSS
Subjt:  MLGDSTTSVLGGGAGGDSAVPATTTHRQDGLIVDMDENNNNSGEDERGRSS

XP_022926243.1 trihelix transcription factor GT-2-like [Cucurbita moschata]2.3e-0663.79Show/hide
Query:  MLGDSTTSVLGGGAGGDSAVPATTTHRQDGLIVDM--------DENNNNSGEDERGRS
        MLGDSTTSVLGGGAG DSAVP  TT++QDGL+ D+        ++NN   GEDERGRS
Subjt:  MLGDSTTSVLGGGAGGDSAVPATTTHRQDGLIVDM--------DENNNNSGEDERGRS

XP_022981410.1 trihelix transcription factor GT-2-like [Cucurbita maxima]4.6e-0765.52Show/hide
Query:  MLGDSTTSVLGGGAGGDSAVPATTTHRQDGLIVDM--------DENNNNSGEDERGRS
        MLG+STTSVLGGGAG DSAVP TT H QDGL+ D+        ++NN  SGEDERGRS
Subjt:  MLGDSTTSVLGGGAGGDSAVPATTTHRQDGLIVDM--------DENNNNSGEDERGRS

TrEMBL top hitse value%identityAlignment
A0A0A0KCE1 Uncharacterized protein1.6e-18100Show/hide
Query:  MLGDSTTSVLGGGAGGDSAVPATTTHRQDGLIVDMDENNNNSGEDERGRSS
        MLGDSTTSVLGGGAGGDSAVPATTTHRQDGLIVDMDENNNNSGEDERGRSS
Subjt:  MLGDSTTSVLGGGAGGDSAVPATTTHRQDGLIVDMDENNNNSGEDERGRSS

A0A1S3BE70 trihelix transcription factor GT-22.2e-1590.2Show/hide
Query:  MLGDSTTSVLGGGAGGDSAVPATTTHRQDGLIVDMDENNNNSGEDERGRSS
        MLGDS TSVLGGGAGGD+AVPATTT RQDGL+ DMDENNNNSGEDERGRSS
Subjt:  MLGDSTTSVLGGGAGGDSAVPATTTHRQDGLIVDMDENNNNSGEDERGRSS

A0A5D3BJ45 Trihelix transcription factor GT-22.2e-1590.2Show/hide
Query:  MLGDSTTSVLGGGAGGDSAVPATTTHRQDGLIVDMDENNNNSGEDERGRSS
        MLGDS TSVLGGGAGGD+AVPATTT RQDGL+ DMDENNNNSGEDERGRSS
Subjt:  MLGDSTTSVLGGGAGGDSAVPATTTHRQDGLIVDMDENNNNSGEDERGRSS

A0A6J1EHH3 trihelix transcription factor GT-2-like1.1e-0663.79Show/hide
Query:  MLGDSTTSVLGGGAGGDSAVPATTTHRQDGLIVDM--------DENNNNSGEDERGRS
        MLGDSTTSVLGGGAG DSAVP  TT++QDGL+ D+        ++NN   GEDERGRS
Subjt:  MLGDSTTSVLGGGAGGDSAVPATTTHRQDGLIVDM--------DENNNNSGEDERGRS

A0A6J1IZF3 trihelix transcription factor GT-2-like2.2e-0765.52Show/hide
Query:  MLGDSTTSVLGGGAGGDSAVPATTTHRQDGLIVDM--------DENNNNSGEDERGRS
        MLG+STTSVLGGGAG DSAVP TT H QDGL+ D+        ++NN  SGEDERGRS
Subjt:  MLGDSTTSVLGGGAGGDSAVPATTTHRQDGLIVDM--------DENNNNSGEDERGRS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTGGAGACTCCACTACTTCCGTCTTGGGCGGCGGCGCCGGAGGAGACTCCGCCGTACCGGCGACTACGACACATCGTCAAGATGGGCTTATAGTGGACATGGATGA
GAATAATAACAATTCTGGTGAAGATGAGAGAGGGAGAAGCAGCCTTTTAGCTGCGGAATCTTTGGTCTTTAATGGGTTATTTTTTAAAAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTTGGAGACTCCACTACTTCCGTCTTGGGCGGCGGCGCCGGAGGAGACTCCGCCGTACCGGCGACTACGACACATCGTCAAGATGGGCTTATAGTGGACATGGATGA
GAATAATAACAATTCTGGTGAAGATGAGAGAGGGAGAAGCAGCCTTTTAGCTGCGGAATCTTTGGTCTTTAATGGGTTATTTTTTAAAAATTAA
Protein sequenceShow/hide protein sequence
MLGDSTTSVLGGGAGGDSAVPATTTHRQDGLIVDMDENNNNSGEDERGRSSLLAAESLVFNGLFFKN