; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI06G03810 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G03810
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRRM domain-containing protein
Genome locationChr6:3580124..3583480
RNA-Seq ExpressionCSPI06G03810
SyntenyCSPI06G03810
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004140894.1 uncharacterized RNA-binding protein C1827.05c [Cucumis sativus]3.2e-11599.06Show/hide
Query:  MGAKARKAMKKKLNKATPLSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFE
        MGAKARKAMKKKLNKATPLSSDKKESADFLPLEGGPGRKL VQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFE
Subjt:  MGAKARKAMKKKLNKATPLSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIDPEHVHPKLWKGFNYRHRPLNWSELERKHHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGSV
        SPEVAKIVADSMHNYLLYEHILKVHLIDPEHVHPKLWKGFNYRHRPLNWSELERKHHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVG V
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIDPEHVHPKLWKGFNYRHRPLNWSELERKHHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGSV

Query:  QPTPKKIKFDED
        QPTPKKIKFDED
Subjt:  QPTPKKIKFDED

XP_008456579.1 PREDICTED: uncharacterized RNA-binding protein C1827.05c [Cucumis melo]7.4e-11296.7Show/hide
Query:  MGAKARKAMKKKLNKATPLSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFE
        MGAKA+KAMKKKL KATPLSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKS+HFGYVEFE
Subjt:  MGAKARKAMKKKLNKATPLSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIDPEHVHPKLWKGFNYRHRPLNWSELERKHHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGSV
        SPEVAKIVADSMHNYLLYEHILKVHLI PEHVHPKLWKGFNYRH PLNWSELERK HNKERTL EHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGSV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIDPEHVHPKLWKGFNYRHRPLNWSELERKHHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGSV

Query:  QPTPKKIKFDED
        QPTPKKIKFDED
Subjt:  QPTPKKIKFDED

XP_022922397.1 uncharacterized RNA-binding protein C1827.05c-like [Cucurbita moschata]5.5e-10792.45Show/hide
Query:  MGAKARKAMKKKLNKATPLSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFE
        MGAKA+KAMKKKLNKAT L S+KKESADFLPLEGGPGRKLP QKPLESTATVLYI RIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKS+HFGY+EF+
Subjt:  MGAKARKAMKKKLNKATPLSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIDPEHVHPKLWKGFNYRHRPLNWSELERKHHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGSV
        SPEVAKIVADSMHNYLLYEHILKVHLI PEHVHPKLWKGFNYRH PLNWSELERK HNKERTL EH+KLV+RILKR+QARQKRIRAAGIDYECPEIVGSV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIDPEHVHPKLWKGFNYRHRPLNWSELERKHHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGSV

Query:  QPTPKKIKFDED
        QPTPKKIKFDED
Subjt:  QPTPKKIKFDED

XP_022993750.1 uncharacterized RNA-binding protein C1827.05c-like [Cucurbita maxima]7.2e-10790.57Show/hide
Query:  MGAKARKAMKKKLNKATPLSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFE
        MGAKA+KAMKKKL+KAT   SDKKESADFLPLEGGPGRKLP QKPLE+TATVLYIGRIPHGFFEKEMEGFFGQFGKVKR+RIARN+KTGKS+HFGY+EFE
Subjt:  MGAKARKAMKKKLNKATPLSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIDPEHVHPKLWKGFNYRHRPLNWSELERKHHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGSV
        SPEVAKIVADSMHNYLLYEH+LKVHLI PEHVHPKLWKGFNYRH+PL+WSELERK HNKERTL+EHKKLV+RILKRDQAR+KRIRAAGIDYECPEIVGSV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIDPEHVHPKLWKGFNYRHRPLNWSELERKHHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGSV

Query:  QPTPKKIKFDED
        QP PKKIKFDED
Subjt:  QPTPKKIKFDED

XP_038885284.1 MKI67 FHA domain-interacting nucleolar phosphoprotein [Benincasa hispida]3.8e-10892.92Show/hide
Query:  MGAKARKAMKKKLNKATPLSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFE
        MGAKA+KAMKKKL+KAT LS  K+ESADFLPLEGGPGRKLP QKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKS+HFGY+EFE
Subjt:  MGAKARKAMKKKLNKATPLSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIDPEHVHPKLWKGFNYRHRPLNWSELERKHHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGSV
        SPEVAKIVADSMHNYLLYEHILKVHLI PEHVHPKLWKGFNYRH PLNWSELERK HNKERTL+EHKKLVDRI+KRDQARQKRIRAAGIDYECPEIVGSV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIDPEHVHPKLWKGFNYRHRPLNWSELERKHHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGSV

Query:  QPTPKKIKFDED
        QP PKKIKFDED
Subjt:  QPTPKKIKFDED

TrEMBL top hitse value%identityAlignment
A0A0A0KCE3 RRM domain-containing protein1.6e-11599.06Show/hide
Query:  MGAKARKAMKKKLNKATPLSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFE
        MGAKARKAMKKKLNKATPLSSDKKESADFLPLEGGPGRKL VQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFE
Subjt:  MGAKARKAMKKKLNKATPLSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIDPEHVHPKLWKGFNYRHRPLNWSELERKHHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGSV
        SPEVAKIVADSMHNYLLYEHILKVHLIDPEHVHPKLWKGFNYRHRPLNWSELERKHHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVG V
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIDPEHVHPKLWKGFNYRHRPLNWSELERKHHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGSV

Query:  QPTPKKIKFDED
        QPTPKKIKFDED
Subjt:  QPTPKKIKFDED

A0A1S3C4U7 uncharacterized RNA-binding protein C1827.05c3.6e-11296.7Show/hide
Query:  MGAKARKAMKKKLNKATPLSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFE
        MGAKA+KAMKKKL KATPLSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKS+HFGYVEFE
Subjt:  MGAKARKAMKKKLNKATPLSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIDPEHVHPKLWKGFNYRHRPLNWSELERKHHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGSV
        SPEVAKIVADSMHNYLLYEHILKVHLI PEHVHPKLWKGFNYRH PLNWSELERK HNKERTL EHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGSV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIDPEHVHPKLWKGFNYRHRPLNWSELERKHHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGSV

Query:  QPTPKKIKFDED
        QPTPKKIKFDED
Subjt:  QPTPKKIKFDED

A0A6J1E350 uncharacterized RNA-binding protein C1827.05c-like2.7e-10792.45Show/hide
Query:  MGAKARKAMKKKLNKATPLSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFE
        MGAKA+KAMKKKLNKAT L S+KKESADFLPLEGGPGRKLP QKPLESTATVLYI RIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKS+HFGY+EF+
Subjt:  MGAKARKAMKKKLNKATPLSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIDPEHVHPKLWKGFNYRHRPLNWSELERKHHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGSV
        SPEVAKIVADSMHNYLLYEHILKVHLI PEHVHPKLWKGFNYRH PLNWSELERK HNKERTL EH+KLV+RILKR+QARQKRIRAAGIDYECPEIVGSV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIDPEHVHPKLWKGFNYRHRPLNWSELERKHHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGSV

Query:  QPTPKKIKFDED
        QPTPKKIKFDED
Subjt:  QPTPKKIKFDED

A0A6J1JIS9 uncharacterized RNA-binding protein C1827.05c-like4.3e-10591.04Show/hide
Query:  MGAKARKAMKKKLNKATPLSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFE
        MGAKA+KAMKKKL+KAT L S++ ESADFLPLEGGPGRKLP QKPLESTATVLYI RIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGY+EF+
Subjt:  MGAKARKAMKKKLNKATPLSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIDPEHVHPKLWKGFNYRHRPLNWSELERKHHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGSV
        SPEVAKIVADSMHNYLLYEHILKVHLI PEHVHPKLWKGFNYRH PLNWSELERK HNKERTL EH+KLV+RILKR+QARQKRIRAA IDYECPEIVGSV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIDPEHVHPKLWKGFNYRHRPLNWSELERKHHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGSV

Query:  QPTPKKIKFDED
        QPTPKKIKFDED
Subjt:  QPTPKKIKFDED

A0A6J1JZE0 uncharacterized RNA-binding protein C1827.05c-like3.5e-10790.57Show/hide
Query:  MGAKARKAMKKKLNKATPLSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFE
        MGAKA+KAMKKKL+KAT   SDKKESADFLPLEGGPGRKLP QKPLE+TATVLYIGRIPHGFFEKEMEGFFGQFGKVKR+RIARN+KTGKS+HFGY+EFE
Subjt:  MGAKARKAMKKKLNKATPLSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIDPEHVHPKLWKGFNYRHRPLNWSELERKHHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGSV
        SPEVAKIVADSMHNYLLYEH+LKVHLI PEHVHPKLWKGFNYRH+PL+WSELERK HNKERTL+EHKKLV+RILKRDQAR+KRIRAAGIDYECPEIVGSV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIDPEHVHPKLWKGFNYRHRPLNWSELERKHHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGSV

Query:  QPTPKKIKFDED
        QP PKKIKFDED
Subjt:  QPTPKKIKFDED

SwissProt top hitse value%identityAlignment
O74978 Uncharacterized RNA-binding protein C1827.05c4.8e-2940Show/hide
Query:  RKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIDPEHVHPKLW
        +K+   K L+    VLY+GR+PHGF+EK+M  +F QFG V RLR++RN+KTG SKH+ ++EFES +VA +VA++MHNYLLY  +L+  +I  + VH  ++
Subjt:  RKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIDPEHVHPKLW

Query:  KGFNYRHRPLNWSELERKHHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYE
        KG +   + +  + + R  H K  + E+  KL+ R  ++ + ++++++  GI  E
Subjt:  KGFNYRHRPLNWSELERKHHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYE

Q3SZM1 MKI67 FHA domain-interacting nucleolar phosphoprotein7.7e-2738.71Show/hide
Query:  QKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIDPEHVHPKLWKGFNY
        Q+  + T  V+Y+G +P   +E ++  +F QFG V R R++R+KKTG SK +G+VEFES +VAKI A++M+NYL  E +LK H I PE VH +L++ ++ 
Subjt:  QKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIDPEHVHPKLWKGFNY

Query:  RHRPLNWSELERKHHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYECPEIV
          +  ++  ++R  +N+ R+L +  ++ +R  K+++  +KR+   GIDY  P +V
Subjt:  RHRPLNWSELERKHHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYECPEIV

Q6GL69 MKI67 FHA domain-interacting nucleolar phosphoprotein-like1.8e-2846.15Show/hide
Query:  VLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIDPEHVHPKLWKGFNYRHRPLNWSE
        V+YIG IP   +E ++  +F QFG V RLR++R+KKTG SK + YVEFE  EVAKIVAD+M+NYL  E +LK   + PE VHP+L+ G   + R      
Subjt:  VLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIDPEHVHPKLWKGFNYRHRPLNWSE

Query:  LERKHHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYECP
        + R  +NK R+  E KK+  R+L ++   +KR+   GIDY+ P
Subjt:  LERKHHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYECP

Q7SYS2 MKI67 FHA domain-interacting nucleolar phosphoprotein-like2.8e-2943.18Show/hide
Query:  LSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFESPEVAKIVADSMHNYLLY
        LS D K   DF        RK   +K    T  V+YIG IP    E +++ +F QFG V RLR++R+KKTG SK + YVE+E  EVAKIVAD+M+NYL  
Subjt:  LSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFESPEVAKIVADSMHNYLLY

Query:  EHILKVHLIDPEHVHPKLWKGFNYRHRPLNWSELERKHHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYECP
        E +LK   + PE VHP+L+ G N R R      + R  +N +R  EE KK+  R++ ++   +KR+   GIDY+ P
Subjt:  EHILKVHLIDPEHVHPKLWKGFNYRHRPLNWSELERKHHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYECP

Q8JIY8 MKI67 FHA domain-interacting nucleolar phosphoprotein2.2e-2944.97Show/hide
Query:  VLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIDPEHVHPKLWKGFNYRHRPLNWSE
        VLY+G +P G FE +++ +F QFGKV RLR++R+KKTG SK +G+VEFE  EVAKIVA++M+NYL+ E I+K H+I PE VH KL+ G     +   +  
Subjt:  VLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIDPEHVHPKLWKGFNYRHRPLNWSE

Query:  LERKHHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGSV
        + R  +NK  T ++ KK+  ++L ++   +KR+ A GIDY+ P     +
Subjt:  LERKHHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGSV

Arabidopsis top hitse value%identityAlignment
AT3G07810.1 RNA-binding (RRM/RBD/RNP motifs) family protein4.5e-0634.78Show/hide
Query:  LESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFESPEVAKIVADSMHN
        ++S    L+IG I     E+ ++ +F  FG+V    I +++ TG+++ FG+V F  P VA+IV    HN
Subjt:  LESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFESPEVAKIVADSMHN

AT3G52660.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.6e-0627.41Show/hide
Query:  DKKESADFLPLEGGPGRKLPVQ-KPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFESPEVAKIVADSMHNYLLYEH
        +++E  D +  E    +K  V+   L    + +Y+G IP    E +++GF G  G+V  +RI R K +G  K + +V F S ++A    D+++N      
Subjt:  DKKESADFLPLEGGPGRKLPVQ-KPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFESPEVAKIVADSMHNYLLYEH

Query:  ILKVHLIDPEHVHPKLWKGFNYRHRPLNWSELERK
         +K      +H   +L+ G    + P NW E + K
Subjt:  ILKVHLIDPEHVHPKLWKGFNYRHRPLNWSELERK

AT3G52660.2 RNA-binding (RRM/RBD/RNP motifs) family protein2.6e-0627.41Show/hide
Query:  DKKESADFLPLEGGPGRKLPVQ-KPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFESPEVAKIVADSMHNYLLYEH
        +++E  D +  E    +K  V+   L    + +Y+G IP    E +++GF G  G+V  +RI R K +G  K + +V F S ++A    D+++N      
Subjt:  DKKESADFLPLEGGPGRKLPVQ-KPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFESPEVAKIVADSMHNYLLYEH

Query:  ILKVHLIDPEHVHPKLWKGFNYRHRPLNWSELERK
         +K      +H   +L+ G    + P NW E + K
Subjt:  ILKVHLIDPEHVHPKLWKGFNYRHRPLNWSELERK

AT4G26650.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.6e-0627.27Show/hide
Query:  PVQKPLESTATV--LYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFESPEVAKIVADSMH-----------------NYLLYEHI
        P ++ +ES + +  L+IG I     E+ ++ +FG++G +    I R++ TG+++ FG++ F  P VA+ V    H                   +L  H 
Subjt:  PVQKPLESTATV--LYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFESPEVAKIVADSMH-----------------NYLLYEHI

Query:  LKVHLIDPEH
          +HLI P H
Subjt:  LKVHLIDPEH

AT5G04600.1 RNA-binding (RRM/RBD/RNP motifs) family protein5.9e-7561.09Show/hide
Query:  MGAKARKAMKKKLNKAT--------PLSSDKKESADFLPLEGGPGRKLPV-QKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKS
        MGAKA+KA+KK + K          PL  + K SADFLPLEGGP RK PV   PL++ ATVLYIGRIPHGF+E E+E FF QFG VKR+R+ARNKKTGKS
Subjt:  MGAKARKAMKKKLNKAT--------PLSSDKKESADFLPLEGGPGRKLPV-QKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKS

Query:  KHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIDPEHVHPKLWKGFNYRHRPLNWSELERKHHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDY
        KHFG+++FE PEVA+I A +M++YLL EH+LKVH+I+PE+V P LW+GF    +P++  ++ER+  NKERTLEEH+K++ +I+K+DQ R+KRI AAGI+Y
Subjt:  KHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIDPEHVHPKLWKGFNYRHRPLNWSELERKHHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDY

Query:  ECPEIVGSVQPTPKKIKFDED
        ECPE+VG+ QP PK+IKF E+
Subjt:  ECPEIVGSVQPTPKKIKFDED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGCTAAGGCGAGGAAAGCTATGAAGAAGAAACTCAATAAGGCTACTCCTCTTTCATCCGACAAGAAGGAATCTGCCGATTTCTTGCCGTTGGAGGGTGGTCCTGG
GCGTAAGTTACCGGTACAGAAGCCATTGGAAAGTACTGCTACTGTTCTTTACATTGGCCGCATACCCCATGGTTTCTTCGAGAAGGAGATGGAAGGGTTTTTCGGACAGT
TTGGGAAAGTAAAAAGATTAAGAATTGCACGAAATAAAAAGACGGGGAAGTCGAAGCATTTTGGCTACGTTGAATTTGAATCTCCAGAGGTAGCAAAAATTGTAGCTGAT
TCCATGCATAACTATTTGTTGTATGAACACATTCTGAAAGTCCATCTAATTGATCCCGAGCATGTTCACCCCAAACTATGGAAAGGTTTTAACTATCGCCATAGGCCCTT
AAACTGGTCTGAACTTGAGCGTAAGCATCATAACAAGGAAAGGACATTGGAGGAACACAAGAAGTTGGTGGATAGAATATTGAAGCGGGATCAGGCTAGACAGAAGAGGA
TAAGGGCTGCTGGGATTGATTATGAGTGTCCAGAAATTGTGGGTAGTGTCCAACCAACTCCCAAGAAGATCAAATTCGATGAAGATTAG
mRNA sequenceShow/hide mRNA sequence
TGAATGGCGAAGATTAAGTCTCAGGCTAAAACGCAGCGTTTTAACCCGTCTTCGACCTACGTACTACGTAGCCTCCATTCTCTTGAGCTCTCTCATTCCGCCGCCGCCAA
CTCCTCTGCTTTCTTCCTTCTTCCTTCTTCTCCTCTTTCAGTTCAATGGGGGCTAAGGCGAGGAAAGCTATGAAGAAGAAACTCAATAAGGCTACTCCTCTTTCATCCGA
CAAGAAGGAATCTGCCGATTTCTTGCCGTTGGAGGGTGGTCCTGGGCGTAAGTTACCGGTACAGAAGCCATTGGAAAGTACTGCTACTGTTCTTTACATTGGCCGCATAC
CCCATGGTTTCTTCGAGAAGGAGATGGAAGGGTTTTTCGGACAGTTTGGGAAAGTAAAAAGATTAAGAATTGCACGAAATAAAAAGACGGGGAAGTCGAAGCATTTTGGC
TACGTTGAATTTGAATCTCCAGAGGTAGCAAAAATTGTAGCTGATTCCATGCATAACTATTTGTTGTATGAACACATTCTGAAAGTCCATCTAATTGATCCCGAGCATGT
TCACCCCAAACTATGGAAAGGTTTTAACTATCGCCATAGGCCCTTAAACTGGTCTGAACTTGAGCGTAAGCATCATAACAAGGAAAGGACATTGGAGGAACACAAGAAGT
TGGTGGATAGAATATTGAAGCGGGATCAGGCTAGACAGAAGAGGATAAGGGCTGCTGGGATTGATTATGAGTGTCCAGAAATTGTGGGTAGTGTCCAACCAACTCCCAAG
AAGATCAAATTCGATGAAGATTAGAATGAGGGTTCGGTTAATAGAAAGCTATTATATTATCACACCAGAGGAAGGAGGAAGCTCTTGCCTCGTTCCAGTTTCTTATGCTG
GAGGGGGGGTTACCTTCCCAATGACCTTGAATCTCCTAATTTTGATCTGTGAAATTTTGTGTCAAAACATACTTTTATTATGCTCTTTAGTAATATGTATTCCCCTTTAT
AAAAATGAAAAAAAGAGAAGTTATATTGAAGCTTTTATGTTTTACAATTCTGATCTTCTCAAAGACAGGAAAACTGAATGGTAAATTTGAAAGTTCCACCATGTCAGAT
Protein sequenceShow/hide protein sequence
MGAKARKAMKKKLNKATPLSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFESPEVAKIVAD
SMHNYLLYEHILKVHLIDPEHVHPKLWKGFNYRHRPLNWSELERKHHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGSVQPTPKKIKFDED