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CSPI06G04270 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G04270
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionNADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3
Genome locationChr6:3960841..3963382
RNA-Seq ExpressionCSPI06G04270
SyntenyCSPI06G04270
Gene Ontology termsGO:0032981 - mitochondrial respiratory chain complex I assembly (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005743 - mitochondrial inner membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR007523 - NDUFAF3/Mth938 domain-containing protein
IPR036748 - MTH938-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646648.1 hypothetical protein Csa_005003 [Cucumis sativus]1.6e-3194.87Show/hide
Query:  LCSFCLSIFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS
        + S  LSIFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS
Subjt:  LCSFCLSIFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS

KDO85372.1 hypothetical protein CISIN_1g030786mg [Citrus sinensis]3.7e-3194.59Show/hide
Query:  CLSIFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS
        CLSIFQ+VRPIPEILILGCGRY EPVNPELRQFIRSTGMKLEA+D+RNAASTYNILNEEGRIVAAALLPYGVSS
Subjt:  CLSIFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS

XP_008460070.1 PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Cucumis melo]1.6e-3198.63Show/hide
Query:  LSIFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS
        LSIFQIVRPIPEIL+LGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS
Subjt:  LSIFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS

XP_031743290.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Cucumis sativus]1.6e-3194.87Show/hide
Query:  LCSFCLSIFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS
        + S  LSIFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS
Subjt:  LCSFCLSIFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS

XP_038906819.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Benincasa hispida]1.3e-31100Show/hide
Query:  LSIFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS
        LSIFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS
Subjt:  LSIFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS

TrEMBL top hitse value%identityAlignment
A0A067H377 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 31.8e-3194.59Show/hide
Query:  CLSIFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS
        CLSIFQ+VRPIPEILILGCGRY EPVNPELRQFIRSTGMKLEA+D+RNAASTYNILNEEGRIVAAALLPYGVSS
Subjt:  CLSIFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS

A0A067HC80 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 31.8e-3194.59Show/hide
Query:  CLSIFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS
        CLSIFQ+VRPIPEILILGCGRY EPVNPELRQFIRSTGMKLEA+D+RNAASTYNILNEEGRIVAAALLPYGVSS
Subjt:  CLSIFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS

A0A1S3CB84 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 38.0e-3298.63Show/hide
Query:  LSIFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS
        LSIFQIVRPIPEIL+LGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS
Subjt:  LSIFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS

A0A5A7TES8 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 38.0e-3298.63Show/hide
Query:  LSIFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS
        LSIFQIVRPIPEIL+LGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS
Subjt:  LSIFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS

V4VZ28 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 31.8e-3194.59Show/hide
Query:  CLSIFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS
        CLSIFQ+VRPIPEILILGCGRY EPVNPELRQFIRSTGMKLEA+D+RNAASTYNILNEEGRIVAAALLPYGVSS
Subjt:  CLSIFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS

SwissProt top hitse value%identityAlignment
A1L1F1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 37.0e-0941.18Show/hide
Query:  LSIFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLP
        LS+F ++ P  E+L+LG G  TE ++ E+ + ++  G+ +E  DT NA +T+N L+ E R+ AAAL+P
Subjt:  LSIFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLP

O08776 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 32.0e-0841.79Show/hide
Query:  SIFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLP
        SIF ++ P  EI+++G G  TE ++ ++ Q +R  G+ +E  DT NA +T+N L  EGR+  AAL+P
Subjt:  SIFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLP

Q2HJI2 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 33.5e-0840.3Show/hide
Query:  SIFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLP
        S+F ++ P  EI+++G G  TE + P + + +R  G+ +E  DT NA +T+N L  EGR+  AAL+P
Subjt:  SIFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLP

Q6DFN1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 32.4e-0944.12Show/hide
Query:  LSIFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLP
        LS+F ++ P  EIL++G G   E ++P + +F+R  G+ +E  DT NA +T+N L  E RI AAAL+P
Subjt:  LSIFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLP

Q9JKL4 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 33.1e-0941.79Show/hide
Query:  SIFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLP
        S+F ++ P  EI+++G G  TE ++P++ Q +R  G+ +E  DT NA +T+N L  EGR+  AAL+P
Subjt:  SIFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLP

Arabidopsis top hitse value%identityAlignment
AT2G44525.1 Protein of unknown function (DUF498/DUF598)1.8e-2879.45Show/hide
Query:  LSIFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS
        LSIFQ VRPIPE+LI+GCGR   PV PE+RQF++S GMKLE VD+RNAASTYNILNEEGR+VAAALLPYGV+S
Subjt:  LSIFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS

AT3G60150.1 Protein of unknown function (DUF498/DUF598)7.4e-3080.82Show/hide
Query:  LSIFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS
        LSIFQ VRPIPE+LI+GCGRY  P+NP++RQF++S GMKLE VD+RNAASTYNILNEEGRIVAAALLPYGV+S
Subjt:  LSIFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTTTTCTTGTTCCTAACTTACAATACTCAATTTACTTCCTTTGTTCTTTTTGCTTATCTATCTTCCAGATTGTGCGCCCTATTCCAGAAATTCTAATACTTGGCTG
TGGGAGATATACTGAACCAGTAAATCCTGAATTGAGGCAGTTCATTCGTTCCACTGGCATGAAGTTGGAAGCTGTAGACACGAGAAATGCGGCATCAACTTATAATATCC
TAAATGAGGAGGGTAGAATTGTAGCTGCAGCGCTTCTGCCTTATGGAGTTTCTTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTTTTCTTGTTCCTAACTTACAATACTCAATTTACTTCCTTTGTTCTTTTTGCTTATCTATCTTCCAGATTGTGCGCCCTATTCCAGAAATTCTAATACTTGGCTG
TGGGAGATATACTGAACCAGTAAATCCTGAATTGAGGCAGTTCATTCGTTCCACTGGCATGAAGTTGGAAGCTGTAGACACGAGAAATGCGGCATCAACTTATAATATCC
TAAATGAGGAGGGTAGAATTGTAGCTGCAGCGCTTCTGCCTTATGGAGTTTCTTCATGA
Protein sequenceShow/hide protein sequence
MPFLVPNLQYSIYFLCSFCLSIFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS