; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI06G04500 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G04500
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionWD repeat protein
Genome locationChr6:4120746..4124540
RNA-Seq ExpressionCSPI06G04500
SyntenyCSPI06G04500
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004140944.1 uncharacterized protein LOC101218374 [Cucumis sativus]3.0e-10499.48Show/hide
Query:  MDQSESEIREVEETNSKSELQPLLEKHNPSSNSKSVKTKVPEIEIHLFRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFN
        MDQSESEIREVEETNSKSELQPLLE HNPSSNSKSVKTKVPEIEIHLFRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFN
Subjt:  MDQSESEIREVEETNSKSELQPLLEKHNPSSNSKSVKTKVPEIEIHLFRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFN

Query:  PRNGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFLSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTKDLLKKYGW
        PRNGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFLSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTKDLLKKYGW
Subjt:  PRNGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFLSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTKDLLKKYGW

XP_008456707.1 PREDICTED: uncharacterized protein LOC103496571 [Cucumis melo]1.8e-10195.83Show/hide
Query:  MDQSESEIREVEETNSKSELQPLLEKHNPSSNSKSVKTKVPEIEIHLFRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFN
        MDQSE+EIREV+ETNSKSELQPLLE  NPSSNSK+VKTKVPE+EIHL+RQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFN
Subjt:  MDQSESEIREVEETNSKSELQPLLEKHNPSSNSKSVKTKVPEIEIHLFRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFN

Query:  PRNGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFLSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTKDLLKKYGW
        PRNGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFLSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRT+DLLKKYGW
Subjt:  PRNGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFLSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTKDLLKKYGW

XP_022990468.1 uncharacterized protein LOC111487320 [Cucurbita maxima]6.3e-9489.58Show/hide
Query:  QSESEIREVEETNSKSELQPLLEKHNPSSNSKSVKTKVPEIEIHLFRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPR
        QSESEIRE+EET+S SELQPLL+  NPSSNS++VKTKVPE+EIHL+RQGKGPIDVFKSSLGGW+QDQLEVR+ILDKYGFKSVFAFKPDSGRGVPIRFNPR
Subjt:  QSESEIREVEETNSKSELQPLLEKHNPSSNSKSVKTKVPEIEIHLFRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPR

Query:  NGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFL--SRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTKDLLKKYGW
        NGRSILTYRDGAEI+IDGEPKDSLIKPVTRI+F VAIITILIT L  SR+SQGWMKKLNITGNFPPWILACVVIVFTRSRKRT+DLLKKYGW
Subjt:  NGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFL--SRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTKDLLKKYGW

XP_023518857.1 uncharacterized protein LOC111782248 [Cucurbita pepo subsp. pepo]3.1e-9389.06Show/hide
Query:  QSESEIREVEETNSKSELQPLLEKHNPSSNSKSVKTKVPEIEIHLFRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPR
        QSESEIRE+EET+S SELQPLL+  N SSNSK+VKTKVPE+EIHL+RQGKGPIDVFKSSLGGW+QDQLEVR+ILDKYGFKSVFAFKPDSGRGVPIRFNPR
Subjt:  QSESEIREVEETNSKSELQPLLEKHNPSSNSKSVKTKVPEIEIHLFRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPR

Query:  NGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFL--SRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTKDLLKKYGW
        NGRSILTYRDGAEI+IDGEPKDSLIKPVTRI+F VAIITI+IT L  SR+SQGWMKKLNITGNFPPWILACVVIVFTRSRKRT+DLLKKYGW
Subjt:  NGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFL--SRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTKDLLKKYGW

XP_038884244.1 uncharacterized protein LOC120075142 [Benincasa hispida]1.1e-9892.71Show/hide
Query:  MDQSESEIREVEETNSKSELQPLLEKHNPSSNSKSVKTKVPEIEIHLFRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFN
        MDQSESEIREVE+T+SKSELQPLLE  NP+ NSK V+TKVPE+EIHL+RQGKGPIDVFKSSLGGWDQDQLEVRDIL+KYGFKSVFAFKPDSGRGVPIRFN
Subjt:  MDQSESEIREVEETNSKSELQPLLEKHNPSSNSKSVKTKVPEIEIHLFRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFN

Query:  PRNGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFLSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTKDLLKKYGW
        PRNGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVA+ITILITFLSRDSQGWMKK NITGNFPPWILACVVIVFTRSRKRT+DLLKKYGW
Subjt:  PRNGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFLSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTKDLLKKYGW

TrEMBL top hitse value%identityAlignment
A0A0A0K9G4 Uncharacterized protein1.5e-10499.48Show/hide
Query:  MDQSESEIREVEETNSKSELQPLLEKHNPSSNSKSVKTKVPEIEIHLFRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFN
        MDQSESEIREVEETNSKSELQPLLE HNPSSNSKSVKTKVPEIEIHLFRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFN
Subjt:  MDQSESEIREVEETNSKSELQPLLEKHNPSSNSKSVKTKVPEIEIHLFRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFN

Query:  PRNGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFLSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTKDLLKKYGW
        PRNGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFLSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTKDLLKKYGW
Subjt:  PRNGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFLSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTKDLLKKYGW

A0A1S3C3V7 uncharacterized protein LOC1034965718.9e-10295.83Show/hide
Query:  MDQSESEIREVEETNSKSELQPLLEKHNPSSNSKSVKTKVPEIEIHLFRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFN
        MDQSE+EIREV+ETNSKSELQPLLE  NPSSNSK+VKTKVPE+EIHL+RQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFN
Subjt:  MDQSESEIREVEETNSKSELQPLLEKHNPSSNSKSVKTKVPEIEIHLFRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFN

Query:  PRNGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFLSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTKDLLKKYGW
        PRNGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFLSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRT+DLLKKYGW
Subjt:  PRNGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFLSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTKDLLKKYGW

A0A6J1BYH2 uncharacterized protein LOC1110067352.4e-9186.77Show/hide
Query:  QSESEIREVEETNSKSELQPLLEKHNPSSNSKSVKTKVPEIEIHLFRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPR
        Q+ESEIRE+EET S SE QPLL+  NPSS+SK+VKTKVPE+EIHL+RQGKGPIDVFKSSLGGWDQDQLE+R+ILDKYGFKS FAFKP++GRGVPIRFNPR
Subjt:  QSESEIREVEETNSKSELQPLLEKHNPSSNSKSVKTKVPEIEIHLFRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPR

Query:  NGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFLSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTKDLLKKYG
        NGRSILTYRDGAEI+IDGEPKDSLIKP+TRIIFGVAI+TILITFLSR+SQG MKKLNI+GNFPPWILACVVIVFTRSRKRT+DLLKK+G
Subjt:  NGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFLSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTKDLLKKYG

A0A6J1HAT7 uncharacterized protein LOC1114611106.4e-9288.02Show/hide
Query:  QSESEIREVEETNSKSELQPLLEKHNPSSNSKSVKTKVPEIEIHLFRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPR
        QSESEIRE+EET+S SELQPLL+  NPSSNSK+VKTKVPE+EIHL+RQGKGPIDVFKSSLGGW+QDQLEVR+ILDKYGFKSVFAFKPDSGRGVPIRFNPR
Subjt:  QSESEIREVEETNSKSELQPLLEKHNPSSNSKSVKTKVPEIEIHLFRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPR

Query:  NGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFL--SRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTKDLLKKYGW
        NGRSILTYR GAEI+IDGEPKDSLIKPVT I+F VAIITI+IT L  SR SQGWMK LNITGNFPPWILACVVIVFTRSRKRT+DLLKKYGW
Subjt:  NGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFL--SRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTKDLLKKYGW

A0A6J1JTD1 uncharacterized protein LOC1114873203.1e-9489.58Show/hide
Query:  QSESEIREVEETNSKSELQPLLEKHNPSSNSKSVKTKVPEIEIHLFRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPR
        QSESEIRE+EET+S SELQPLL+  NPSSNS++VKTKVPE+EIHL+RQGKGPIDVFKSSLGGW+QDQLEVR+ILDKYGFKSVFAFKPDSGRGVPIRFNPR
Subjt:  QSESEIREVEETNSKSELQPLLEKHNPSSNSKSVKTKVPEIEIHLFRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPR

Query:  NGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFL--SRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTKDLLKKYGW
        NGRSILTYRDGAEI+IDGEPKDSLIKPVTRI+F VAIITILIT L  SR+SQGWMKKLNITGNFPPWILACVVIVFTRSRKRT+DLLKKYGW
Subjt:  NGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFL--SRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTKDLLKKYGW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G71780.1 unknown protein1.4e-6763.44Show/hide
Query:  REVEETNSKSELQPLLEKHNPSS--NSKSVKTKVPEIEIHLFRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPRNGRS
        +E+EET       PLLE   P S   S +   KVPE+EIHL++ GKGPIDVFKS+LGG++QDQLEVR IL+KYG K++FAF  + GR VPIRF+PRNGRS
Subjt:  REVEETNSKSELQPLLEKHNPSS--NSKSVKTKVPEIEIHLFRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPRNGRS

Query:  ILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFLSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTKDLLKKYGW
        +L YRDGA I+IDGEP+DSL+KP+TRII GV I+T+LITFL +D   W+K     G FPPW+LAC+VIVFTR+RKRT+D  KKYGW
Subjt:  ILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFLSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTKDLLKKYGW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCAAAGCGAGAGCGAAATTCGAGAAGTTGAAGAAACAAATTCCAAATCGGAGTTGCAACCTCTTCTTGAGAAACACAATCCAAGTTCGAACTCCAAATCTGTGAA
GACCAAGGTTCCGGAGATTGAGATCCATCTTTTTCGTCAGGGAAAAGGTCCGATCGATGTGTTTAAATCAAGCCTTGGTGGTTGGGATCAAGATCAGCTTGAGGTCCGAG
ATATTCTGGACAAATACGGATTCAAGTCCGTATTCGCCTTCAAACCTGACTCTGGTCGTGGCGTCCCCATTCGATTCAACCCTAGAAATGGCAGGTCTATACTGACTTAC
AGAGATGGAGCCGAAATTTTCATTGACGGAGAGCCTAAGGATTCCCTGATCAAACCAGTAACCAGGATCATTTTTGGCGTGGCAATTATAACCATTTTGATAACATTTCT
CTCTCGAGACTCACAAGGGTGGATGAAGAAACTTAATATCACTGGGAACTTCCCTCCTTGGATTCTAGCTTGTGTCGTTATCGTTTTTACTCGCTCAAGGAAGAGAACTA
AGGACTTACTTAAAAAGTACGGTTGGTAA
mRNA sequenceShow/hide mRNA sequence
GAACAAATAAAGTTCCCACAACTGACAACCGTACATCAAAACACAGGGCGCGAAATGGATCAAAGCGAGAGCGAAATTCGAGAAGTTGAAGAAACAAATTCCAAATCGGA
GTTGCAACCTCTTCTTGAGAAACACAATCCAAGTTCGAACTCCAAATCTGTGAAGACCAAGGTTCCGGAGATTGAGATCCATCTTTTTCGTCAGGGAAAAGGTCCGATCG
ATGTGTTTAAATCAAGCCTTGGTGGTTGGGATCAAGATCAGCTTGAGGTCCGAGATATTCTGGACAAATACGGATTCAAGTCCGTATTCGCCTTCAAACCTGACTCTGGT
CGTGGCGTCCCCATTCGATTCAACCCTAGAAATGGCAGGTCTATACTGACTTACAGAGATGGAGCCGAAATTTTCATTGACGGAGAGCCTAAGGATTCCCTGATCAAACC
AGTAACCAGGATCATTTTTGGCGTGGCAATTATAACCATTTTGATAACATTTCTCTCTCGAGACTCACAAGGGTGGATGAAGAAACTTAATATCACTGGGAACTTCCCTC
CTTGGATTCTAGCTTGTGTCGTTATCGTTTTTACTCGCTCAAGGAAGAGAACTAAGGACTTACTTAAAAAGTACGGTTGGTAATTGTCTAGTGCTTCATCAACTTTTGTT
CCTTCAAAAAAGAAAAGAAAAAAAAGTCAATCCTCCAATAGAAAGTGGAAATTGATTCTAGGTTCTCAATTTCGAACTTCCAAAAATAGGAGACAGAATACTGTACCGTA
TTGCTAGCAAAAGCGAACCATTCTCGGTCCATCGGTACCATAAATTCCCCGTCTTAATTTGTTCTTCGATATGTGTAGATAAGCAGCCTCTGTTTGCTGGACTGAAATTT
GTTTGAGTTTGAGCCATAGTTTTAACTTTTTAGGTTGGGTGAAAGCTTTCATCACTTTGAGTTGCATTATTCGGATTTGCTCACGAAGTAAATTTAGATTCTGTTTTATG
TTTGGTTTATAAATTCACTACTGTGTTGTATTAATTTGATCAAAACCCTATCAACATTATGCTCTTGTTTAGATTCTGTTTAAAAAGGCTGCTTAATATTTAATTGTAAA
TTAAGTGTGAGTTAAGTTTATAATGCCTTTGG
Protein sequenceShow/hide protein sequence
MDQSESEIREVEETNSKSELQPLLEKHNPSSNSKSVKTKVPEIEIHLFRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPRNGRSILTY
RDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFLSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTKDLLKKYGW