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CSPI06G04640 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G04640
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionProlamin_like domain-containing protein
Genome locationChr6:4223355..4223759
RNA-Seq ExpressionCSPI06G04640
SyntenyCSPI06G04640
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR008502 - Prolamin-like domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046835.1 hypothetical protein E6C27_scaffold216G001330 [Cucumis melo var. makuwa]1.1e-6090.32Show/hide
Query:  MRAMVILLSAINLAKLVQPSGVDEDYNSSIWNDWLDEDRAFTLRPCLDRMRSAKCQVELYNYYFNISKKELDLNCCVFVKVMGKKCAQAFTFWYQFPGLE
        MRA+VILL AINL+KLVQ SGVDEDYNS IW+ W+DEDR +TLRPCLDRMRSAKCQVELYNYYFNISKKELDLNCCVFVKVMGKKCAQAFTFWYQFPGLE
Subjt:  MRAMVILLSAINLAKLVQPSGVDEDYNSSIWNDWLDEDRAFTLRPCLDRMRSAKCQVELYNYYFNISKKELDLNCCVFVKVMGKKCAQAFTFWYQFPGLE

Query:  IYEPNPMKVYNNCATRLSAPPPAP
        IYEPNPMKVYNNC TRL APPPAP
Subjt:  IYEPNPMKVYNNCATRLSAPPPAP

KAA0046841.1 hypothetical protein E6C27_scaffold216G001410 [Cucumis melo var. makuwa]4.1e-4770.15Show/hide
Query:  MANVKTNTMRAMVILLSAINLAKLVQPS--GVDEDYNSSIWNDWLDEDRAFTLRPCLDRMRSAKCQVELYNYYFNISKKELDLNCCVFVKVMGKKCAQAF
        MAN        + ILL A+NLA LV PS   VD+DYNS IWN W+DEDRA  LRPCLD M+SAKCQV+LYNYYFNISKKELDL CCVFVK+MGK CA AF
Subjt:  MANVKTNTMRAMVILLSAINLAKLVQPS--GVDEDYNSSIWNDWLDEDRAFTLRPCLDRMRSAKCQVELYNYYFNISKKELDLNCCVFVKVMGKKCAQAF

Query:  TFWYQFPGLEIYEPNPMKVYNNCATRLSAPPPAP
          WY+FPGLE+YEPNPM VYNNC  RL A PP P
Subjt:  TFWYQFPGLEIYEPNPMKVYNNCATRLSAPPPAP

KAE8646662.1 hypothetical protein Csa_004797, partial [Cucumis sativus]7.9e-5994.83Show/hide
Query:  MANVKTNTMRAMVILLSAINLAKLVQPSGVDEDYNSSIWNDWLDEDRAFTLRPCLDRMRSAKCQVELYNYYFNISKKELDLNCCVFVKVMGKKCAQAFTF
        MAN+KTN MRAM+ILLS INLAKLVQP GVDEDYNSSIWNDWLDEDRAFTLRPCLDRMRSAKCQVELYNYYFNISK+ELDLNCCVFVKVMGKKCAQAFTF
Subjt:  MANVKTNTMRAMVILLSAINLAKLVQPSGVDEDYNSSIWNDWLDEDRAFTLRPCLDRMRSAKCQVELYNYYFNISKKELDLNCCVFVKVMGKKCAQAFTF

Query:  WYQFPGLEIYEPNPMK
        WYQFPGLEIYEPNPMK
Subjt:  WYQFPGLEIYEPNPMK

KAG6578867.1 hypothetical protein SDJN03_23315, partial [Cucurbita argyrosperma subsp. sororia]2.4e-4774.19Show/hide
Query:  MRAMVILLSAINLAKLVQPSGVDEDYNSSIWNDWLDEDRAFTLRPCLDRMRSAKCQVELYNYYFNISKKELDLNCCVFVKVMGKKCAQAFTFWYQFPGLE
        M AMVILL AINLA L QPS  D+DYNS IW+ W+DEDR   LRPCLD M+SAKCQVELYNYYFNISKKELDLNCCVFVKVMGK+CA+AF  W++FP  E
Subjt:  MRAMVILLSAINLAKLVQPSGVDEDYNSSIWNDWLDEDRAFTLRPCLDRMRSAKCQVELYNYYFNISKKELDLNCCVFVKVMGKKCAQAFTFWYQFPGLE

Query:  IYEPNPMKVYNNCATRLSAPPPAP
        ++E NPMKVY NC  RL A PPAP
Subjt:  IYEPNPMKVYNNCATRLSAPPPAP

KGN50979.1 hypothetical protein Csa_008880 [Cucumis sativus]5.7e-4164.89Show/hide
Query:  NVKTNTMRAMVIL-LSAINLAKLVQPSGVDEDYNSSIWNDWLDEDRAFTLRPCLDRMRSAKCQVELYNYYFNISKKELDLNCCVFVKVMGKKCAQAFTFW
        N  T  +  +V+L L  ++   LVQPS VD++  SSIW+DWLDEDRA TL PCL  MRS KCQVELYNYYFNISKKELDL+CCV+V  MGKKCA AF FW
Subjt:  NVKTNTMRAMVIL-LSAINLAKLVQPSGVDEDYNSSIWNDWLDEDRAFTLRPCLDRMRSAKCQVELYNYYFNISKKELDLNCCVFVKVMGKKCAQAFTFW

Query:  YQFPGLEIYEPNPMKVYNNCATRLSAPPPAP
        + FP LE  +PNPMKVYNNC  RL+ P P P
Subjt:  YQFPGLEIYEPNPMKVYNNCATRLSAPPPAP

TrEMBL top hitse value%identityAlignment
A0A0A0KEB8 Prolamin_like domain-containing protein2.0e-6896.97Show/hide
Query:  MANVKTNTMRAMVILLSAINLAKLVQPSGVDEDYNSSIWNDWLDEDRAFTLRPCLDRMRSAKCQVELYNYYFNISKKELDLNCCVFVKVMGKKCAQAFTF
        MAN KTN MRAMVILLSAINLAKLVQ SGVDEDYNSSIWNDWLDEDRAFTLRPCLDRMRSAKCQVELYNYYFNISKKELDLNCCVFVKVMGKKCAQAFTF
Subjt:  MANVKTNTMRAMVILLSAINLAKLVQPSGVDEDYNSSIWNDWLDEDRAFTLRPCLDRMRSAKCQVELYNYYFNISKKELDLNCCVFVKVMGKKCAQAFTF

Query:  WYQFPGLEIYEPNPMKVYNNCATRLSAPPPAP
        WYQFPGLEIYEPNPMKVYNNCATRLSAPPP P
Subjt:  WYQFPGLEIYEPNPMKVYNNCATRLSAPPPAP

A0A0A0KQ41 Prolamin_like domain-containing protein2.7e-4164.89Show/hide
Query:  NVKTNTMRAMVIL-LSAINLAKLVQPSGVDEDYNSSIWNDWLDEDRAFTLRPCLDRMRSAKCQVELYNYYFNISKKELDLNCCVFVKVMGKKCAQAFTFW
        N  T  +  +V+L L  ++   LVQPS VD++  SSIW+DWLDEDRA TL PCL  MRS KCQVELYNYYFNISKKELDL+CCV+V  MGKKCA AF FW
Subjt:  NVKTNTMRAMVIL-LSAINLAKLVQPSGVDEDYNSSIWNDWLDEDRAFTLRPCLDRMRSAKCQVELYNYYFNISKKELDLNCCVFVKVMGKKCAQAFTFW

Query:  YQFPGLEIYEPNPMKVYNNCATRLSAPPPAP
        + FP LE  +PNPMKVYNNC  RL+ P P P
Subjt:  YQFPGLEIYEPNPMKVYNNCATRLSAPPPAP

A0A0A0L535 Prolamin_like domain-containing protein2.4e-2952.07Show/hide
Query:  MVILLS--AINLAKLVQPSGVDEDYNSSIWNDWLDEDRAFTLRPCLDRMRSAKCQVELYNYYFNISKKELDLNCCVFVKVMGKKCAQAFTFWYQFPGLEI
        +V++LS   ++   LV PS +D++  SSIW+ W+D+DRA  L  CL  M+S KCQVELYNYYFN SKKE+DL+CCV+V  +G++CA +F  W+   G + 
Subjt:  MVILLS--AINLAKLVQPSGVDEDYNSSIWNDWLDEDRAFTLRPCLDRMRSAKCQVELYNYYFNISKKELDLNCCVFVKVMGKKCAQAFTFWYQFPGLEI

Query:  YEPNPMKVYNNCATRLSAPPP
         +PNPMK+YNNC  RL+ P P
Subjt:  YEPNPMKVYNNCATRLSAPPP

A0A5A7TZR1 Prolamin_like domain-containing protein2.0e-4770.15Show/hide
Query:  MANVKTNTMRAMVILLSAINLAKLVQPS--GVDEDYNSSIWNDWLDEDRAFTLRPCLDRMRSAKCQVELYNYYFNISKKELDLNCCVFVKVMGKKCAQAF
        MAN        + ILL A+NLA LV PS   VD+DYNS IWN W+DEDRA  LRPCLD M+SAKCQV+LYNYYFNISKKELDL CCVFVK+MGK CA AF
Subjt:  MANVKTNTMRAMVILLSAINLAKLVQPS--GVDEDYNSSIWNDWLDEDRAFTLRPCLDRMRSAKCQVELYNYYFNISKKELDLNCCVFVKVMGKKCAQAF

Query:  TFWYQFPGLEIYEPNPMKVYNNCATRLSAPPPAP
          WY+FPGLE+YEPNPM VYNNC  RL A PP P
Subjt:  TFWYQFPGLEIYEPNPMKVYNNCATRLSAPPPAP

A0A5D3C280 Prolamin_like domain-containing protein5.3e-6190.32Show/hide
Query:  MRAMVILLSAINLAKLVQPSGVDEDYNSSIWNDWLDEDRAFTLRPCLDRMRSAKCQVELYNYYFNISKKELDLNCCVFVKVMGKKCAQAFTFWYQFPGLE
        MRA+VILL AINL+KLVQ SGVDEDYNS IW+ W+DEDR +TLRPCLDRMRSAKCQVELYNYYFNISKKELDLNCCVFVKVMGKKCAQAFTFWYQFPGLE
Subjt:  MRAMVILLSAINLAKLVQPSGVDEDYNSSIWNDWLDEDRAFTLRPCLDRMRSAKCQVELYNYYFNISKKELDLNCCVFVKVMGKKCAQAFTFWYQFPGLE

Query:  IYEPNPMKVYNNCATRLSAPPPAP
        IYEPNPMKVYNNC TRL APPPAP
Subjt:  IYEPNPMKVYNNCATRLSAPPPAP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAATGTCAAAACCAACACAATGAGAGCAATGGTGATTCTCTTATCCGCAATAAACTTGGCAAAATTAGTTCAACCTTCTGGGGTAGACGAAGACTACAATTCATC
CATATGGAATGATTGGTTAGACGAAGATAGAGCATTCACTCTACGACCATGTTTGGATAGGATGAGAAGTGCAAAATGTCAAGTGGAACTATACAATTACTACTTCAATA
TAAGTAAGAAGGAATTGGATTTGAATTGTTGTGTCTTCGTAAAAGTCATGGGAAAGAAGTGTGCACAAGCTTTCACTTTTTGGTACCAATTTCCTGGTTTGGAAATCTAC
GAGCCTAATCCTATGAAGGTTTATAATAATTGTGCTACGCGACTTAGTGCGCCCCCACCTGCACCTAAAGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAATGTCAAAACCAACACAATGAGAGCAATGGTGATTCTCTTATCCGCAATAAACTTGGCAAAATTAGTTCAACCTTCTGGGGTAGACGAAGACTACAATTCATC
CATATGGAATGATTGGTTAGACGAAGATAGAGCATTCACTCTACGACCATGTTTGGATAGGATGAGAAGTGCAAAATGTCAAGTGGAACTATACAATTACTACTTCAATA
TAAGTAAGAAGGAATTGGATTTGAATTGTTGTGTCTTCGTAAAAGTCATGGGAAAGAAGTGTGCACAAGCTTTCACTTTTTGGTACCAATTTCCTGGTTTGGAAATCTAC
GAGCCTAATCCTATGAAGGTTTATAATAATTGTGCTACGCGACTTAGTGCGCCCCCACCTGCACCTAAAGCTTAA
Protein sequenceShow/hide protein sequence
MANVKTNTMRAMVILLSAINLAKLVQPSGVDEDYNSSIWNDWLDEDRAFTLRPCLDRMRSAKCQVELYNYYFNISKKELDLNCCVFVKVMGKKCAQAFTFWYQFPGLEIY
EPNPMKVYNNCATRLSAPPPAPKA