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CSPI06G05070 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G05070
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr6:4638999..4639286
RNA-Seq ExpressionCSPI06G05070
SyntenyCSPI06G05070
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054914.1 hypothetical protein E6C27_scaffold43052G00420 [Cucumis melo var. makuwa]4.9e-3990.53Show/hide
Query:  MGCSTANIVILTIFVASIALRLPTETTARAIADPYPLSWPRLVIYNTVMKVRLNDEAGSGEGNGDDESDPPLKEEKGSRKPWPKNPVSKSPPPPF
        MGCSTANI+ILTIFVASIALRLP+ETTARAIADPYPLSWP L IYNT+MKVRLNDEAGSGE NGDDESDPP KE K SRKPWPKNPVSKSPPPPF
Subjt:  MGCSTANIVILTIFVASIALRLPTETTARAIADPYPLSWPRLVIYNTVMKVRLNDEAGSGEGNGDDESDPPLKEEKGSRKPWPKNPVSKSPPPPF

KAE8637368.1 hypothetical protein CSA_004461, partial [Cucumis sativus]1.1e-3897.67Show/hide
Query:  MGCSTANIVILTIFVASIALRLPTETTARAIADPYPLSWPRLVIYNTVMKVRLNDEAGSGEGNGDDESDPPLKEEKGSRKPWPKNP
        MGCSTANIVILTIFVASIALRLPTETTARAIADPYPLSWPRL+IYNTVMKVRLNDEAGSGEG+GDDESDPPLKEEKGSRKPWPKNP
Subjt:  MGCSTANIVILTIFVASIALRLPTETTARAIADPYPLSWPRLVIYNTVMKVRLNDEAGSGEGNGDDESDPPLKEEKGSRKPWPKNP

KAE8646678.1 hypothetical protein Csa_023589, partial [Cucumis sativus]1.5e-3597.47Show/hide
Query:  SIALRLPTETTARAIADPYPLSWPRLVIYNTVMKVRLNDEAGSGEGNGDDESDPPLKEEKGSRKPWPKNPVSKSPPPPF
        SIALRLPTETTARAIADPYPLSWPRL+IYNTVMKVRLNDEAGSGEG+GDDESDPPLKEEKGSRKPWPKNPVSKSPPPPF
Subjt:  SIALRLPTETTARAIADPYPLSWPRLVIYNTVMKVRLNDEAGSGEGNGDDESDPPLKEEKGSRKPWPKNPVSKSPPPPF

KAG6578898.1 hypothetical protein SDJN03_23346, partial [Cucurbita argyrosperma subsp. sororia]1.1e-0948.04Show/hide
Query:  MGCSTANIVILTIFVASIALRLPTETTARAIADPYPLSWPRL------VIYNTVMKVRLNDEAGSGEGNGDDESD-PPLKEEKGSRKPWPKNPVSKSPPP
        MG STAN+ +  I VASIALRLP E  A A+  P PL  P        +++   +KV L  +A     +G+DE++ P  K+EKG RKPWPK PV K+PPP
Subjt:  MGCSTANIVILTIFVASIALRLPTETTARAIADPYPLSWPRL------VIYNTVMKVRLNDEAGSGEGNGDDESD-PPLKEEKGSRKPWPKNPVSKSPPP

Query:  PF
        PF
Subjt:  PF

KAG6578899.1 hypothetical protein SDJN03_23347, partial [Cucurbita argyrosperma subsp. sororia]5.1e-1249.04Show/hide
Query:  MGCSTANIVILTIFVASIALRLPTETTARAIADPYPLSWP------RLVIYNTVMKVRLNDEAGSGEGNGDDESDPP---LKEEKGSRKPWPKNPVSKSP
        MG STAN+ I+ I VASIALR P+ TTA A+  P PL  P        + +   +K+ L  +AG    NG+DES+PP    K  +G R+PWPK PV+KSP
Subjt:  MGCSTANIVILTIFVASIALRLPTETTARAIADPYPLSWP------RLVIYNTVMKVRLNDEAGSGEGNGDDESDPP---LKEEKGSRKPWPKNPVSKSP

Query:  PPPF
        PPPF
Subjt:  PPPF

TrEMBL top hitse value%identityAlignment
A0A0A0K9K2 Uncharacterized protein3.2e-4497.89Show/hide
Query:  MGCSTANIVILTIFVASIALRLPTETTARAIADPYPLSWPRLVIYNTVMKVRLNDEAGSGEGNGDDESDPPLKEEKGSRKPWPKNPVSKSPPPPF
        MGCSTANIVILTIFVASIALRLPTETTARAIADPYPLSWPRL+IYNTVMKVRLNDEAGSGEG+GDDESDPPLKEEKGSRKPWPKNPVSKSPPPPF
Subjt:  MGCSTANIVILTIFVASIALRLPTETTARAIADPYPLSWPRLVIYNTVMKVRLNDEAGSGEGNGDDESDPPLKEEKGSRKPWPKNPVSKSPPPPF

A0A5A7UIB8 Uncharacterized protein2.4e-3990.53Show/hide
Query:  MGCSTANIVILTIFVASIALRLPTETTARAIADPYPLSWPRLVIYNTVMKVRLNDEAGSGEGNGDDESDPPLKEEKGSRKPWPKNPVSKSPPPPF
        MGCSTANI+ILTIFVASIALRLP+ETTARAIADPYPLSWP L IYNT+MKVRLNDEAGSGE NGDDESDPP KE K SRKPWPKNPVSKSPPPPF
Subjt:  MGCSTANIVILTIFVASIALRLPTETTARAIADPYPLSWPRLVIYNTVMKVRLNDEAGSGEGNGDDESDPPLKEEKGSRKPWPKNPVSKSPPPPF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCTGTTCAACTGCCAATATTGTTATTTTAACTATTTTTGTAGCATCCATAGCTCTTAGGCTACCGACGGAAACCACCGCAAGAGCCATTGCCGACCCTTATCCTCT
CTCATGGCCGCGGTTGGTGATATACAATACGGTGATGAAAGTCAGGCTTAATGATGAAGCAGGGTCAGGAGAGGGAAATGGAGATGATGAATCTGATCCACCATTGAAGG
AAGAAAAGGGGAGCAGAAAACCTTGGCCGAAGAACCCTGTCTCTAAATCTCCACCACCACCATTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGCTGTTCAACTGCCAATATTGTTATTTTAACTATTTTTGTAGCATCCATAGCTCTTAGGCTACCGACGGAAACCACCGCAAGAGCCATTGCCGACCCTTATCCTCT
CTCATGGCCGCGGTTGGTGATATACAATACGGTGATGAAAGTCAGGCTTAATGATGAAGCAGGGTCAGGAGAGGGAAATGGAGATGATGAATCTGATCCACCATTGAAGG
AAGAAAAGGGGAGCAGAAAACCTTGGCCGAAGAACCCTGTCTCTAAATCTCCACCACCACCATTTTAG
Protein sequenceShow/hide protein sequence
MGCSTANIVILTIFVASIALRLPTETTARAIADPYPLSWPRLVIYNTVMKVRLNDEAGSGEGNGDDESDPPLKEEKGSRKPWPKNPVSKSPPPPF