; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI06G05320 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G05320
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr6:4840837..4841453
RNA-Seq ExpressionCSPI06G05320
SyntenyCSPI06G05320
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033453.1 hypothetical protein E6C27_scaffold111G001140 [Cucumis melo var. makuwa]4.0e-4783.57Show/hide
Query:  MDQIKDASSFFLWEDSADSEVDKLLSHPPHELESAVDDADDQEDACSCSCNNNDFSID-----DFQDAYDGDNGDG--DQDIGLIRDGGRRRSGAG--YE
        MDQIKDASSFFLWEDSADSEVDKLLSH PHELESAVDD DDQEDACSCSCNNNDFSID     DFQD  DGDNGD   DQDI LI DGGRRRSGA   Y 
Subjt:  MDQIKDASSFFLWEDSADSEVDKLLSHPPHELESAVDDADDQEDACSCSCNNNDFSID-----DFQDAYDGDNGDG--DQDIGLIRDGGRRRSGAG--YE

Query:  EEEEEEEEEESSNNDVGVIRNMNEMEDKVFWDTCMAGGYP
         EEEEEEEEE S++DVGVIRNMNEMEDK+FWDTCMAGGYP
Subjt:  EEEEEEEEEESSNNDVGVIRNMNEMEDKVFWDTCMAGGYP

KAE8646684.1 hypothetical protein Csa_005604 [Cucumis sativus]1.7e-5396.55Show/hide
Query:  SADSEVDKLLSHPPHELESAVDDADDQEDACSCSCNNNDFSIDDFQDAYDGDNGDGDQDIGLIRDGGRRRSGAGYEEEEEEEEEEESSNNDVGVIRNMNE
        SADSEVDKLLSHPPH+LESAVDDADDQEDACSCSCNNNDFSIDDFQDAYDGDNGDGDQDIGLI DGGRRRSGAGY EEEEEEEEEESSNNDVG IRNMNE
Subjt:  SADSEVDKLLSHPPHELESAVDDADDQEDACSCSCNNNDFSIDDFQDAYDGDNGDGDQDIGLIRDGGRRRSGAGYEEEEEEEEEEESSNNDVGVIRNMNE

Query:  MEDKVFWDTCMAGGYP
        MEDKVFWDTCMAGGYP
Subjt:  MEDKVFWDTCMAGGYP

KAG6575041.1 hypothetical protein SDJN03_25680, partial [Cucurbita argyrosperma subsp. sororia]2.5e-2560.87Show/hide
Query:  IKDASSFFLWEDSADSEVDKLLSHPPHELESAVDDADDQEDACSCSCNN--NDFSIDDFQDAYDGDNGDGDQDIGLIRDGGR-------RRSGAGYE-EE
        + +ASS FLWED+ADSEVD+LLSH PH+LESAV   DD EDA SCSC++   D S  D QD  DGD GD D+ +G   D  R       R SGA  E   
Subjt:  IKDASSFFLWEDSADSEVDKLLSHPPHELESAVDDADDQEDACSCSCNN--NDFSIDDFQDAYDGDNGDGDQDIGLIRDGGR-------RRSGAGYE-EE

Query:  EEEEEEEESSNNDVGVIRNMNEMEDKVFWDTCMAGGYP
        EE+EEEEE SNN+VG IR+MNEMEDK+FWDTCM GGYP
Subjt:  EEEEEEEESSNNDVGVIRNMNEMEDKVFWDTCMAGGYP

XP_020425650.1 uncharacterized protein LOC18790634 [Prunus persica]5.8e-0640Show/hide
Query:  DASSFFLWEDSADSEVDKLLSHPPHELESAVDDADDQEDACSCS---CNNNDFSIDDFQDAYDGDNGDGDQDIGLIRDGGRRRSGAGYEEEEEEEEEEES
        D S FFLWE SADSE D           S ++ A + EDA SCS    +++ F   +  D+Y  +  +  Q     + G +  +G+GYEE+EEEE E   
Subjt:  DASSFFLWEDSADSEVDKLLSHPPHELESAVDDADDQEDACSCS---CNNNDFSIDDFQDAYDGDNGDGDQDIGLIRDGGRRRSGAGYEEEEEEEEEEES

Query:  SNNDVGVIRNMNEM-EDKVFWDTCMAGGYP
        S     V ++M+EM ED++FW+TCMA GYP
Subjt:  SNNDVGVIRNMNEM-EDKVFWDTCMAGGYP

XP_034198362.1 uncharacterized protein LOC117613862 [Prunus dulcis]5.2e-0740.77Show/hide
Query:  DASSFFLWEDSADSEVDKLLSHPPHELESAVDDADDQEDACSCS---CNNNDFSIDDFQDAYDGDNGDGDQDIGLIRDGGRRRSGAGYEEEEEEEEEEES
        D S FFLWEDSADSE D        +  S ++ A + EDA SCS    +++ F   +  D+Y  +  +  Q     + G +  +G+GYEE+EEEE E   
Subjt:  DASSFFLWEDSADSEVDKLLSHPPHELESAVDDADDQEDACSCS---CNNNDFSIDDFQDAYDGDNGDGDQDIGLIRDGGRRRSGAGYEEEEEEEEEEES

Query:  SNNDVGVIRNMNEM-EDKVFWDTCMAGGYP
        S     V ++M+EM ED++FW+TCMA GYP
Subjt:  SNNDVGVIRNMNEM-EDKVFWDTCMAGGYP

TrEMBL top hitse value%identityAlignment
A0A0A0KBF3 Uncharacterized protein5.6e-6396.95Show/hide
Query:  MDQIKDASSFFLWEDSADSEVDKLLSHPPHELESAVDDADDQEDACSCSCNNNDFSIDDFQDAYDGDNGDGDQDIGLIRDGGRRRSGAGYEEEEEEEEEE
        MDQIKDASSFFLWEDSADSEVDKLLSHPPH+LESAVDDADDQEDACSCSCNNNDFSIDDFQDAYDGDNGDGDQDIGLI DGGRRRSGAGY EEEEEEEEE
Subjt:  MDQIKDASSFFLWEDSADSEVDKLLSHPPHELESAVDDADDQEDACSCSCNNNDFSIDDFQDAYDGDNGDGDQDIGLIRDGGRRRSGAGYEEEEEEEEEE

Query:  ESSNNDVGVIRNMNEMEDKVFWDTCMAGGYP
        ESSNNDVG IRNMNEMEDKVFWDTCMAGGYP
Subjt:  ESSNNDVGVIRNMNEMEDKVFWDTCMAGGYP

A0A251QXF0 Uncharacterized protein2.8e-0640Show/hide
Query:  DASSFFLWEDSADSEVDKLLSHPPHELESAVDDADDQEDACSCS---CNNNDFSIDDFQDAYDGDNGDGDQDIGLIRDGGRRRSGAGYEEEEEEEEEEES
        D S FFLWE SADSE D           S ++ A + EDA SCS    +++ F   +  D+Y  +  +  Q     + G +  +G+GYEE+EEEE E   
Subjt:  DASSFFLWEDSADSEVDKLLSHPPHELESAVDDADDQEDACSCS---CNNNDFSIDDFQDAYDGDNGDGDQDIGLIRDGGRRRSGAGYEEEEEEEEEEES

Query:  SNNDVGVIRNMNEM-EDKVFWDTCMAGGYP
        S     V ++M+EM ED++FW+TCMA GYP
Subjt:  SNNDVGVIRNMNEM-EDKVFWDTCMAGGYP

A0A2H5N748 Uncharacterized protein8.2e-0637.78Show/hide
Query:  DASSFFLWEDSADSEVDKLLSHPPHELESAVDDADDQEDACSCSCNNNDFSIDDFQDAYDGDNGDGDQD-IGLIRDGGRRRSGAGYEE---EEEEEEEEE
        D SSF L E+SADSEVD L       L  AV    D++DA SCSC+  +   +     +D  N + + D  G   D  R+ +  G  +    +  ++EEE
Subjt:  DASSFFLWEDSADSEVDKLLSHPPHELESAVDDADDQEDACSCSCNNNDFSIDDFQDAYDGDNGDGDQD-IGLIRDGGRRRSGAGYEE---EEEEEEEEE

Query:  SSNNDVGVIRNM-----NEMEDKVFWDTCMAGGYP
         S+ D+G+  N+     +EMED++FW+TCMA GYP
Subjt:  SSNNDVGVIRNM-----NEMEDKVFWDTCMAGGYP

A0A5A7SSL9 Uncharacterized protein1.9e-4783.57Show/hide
Query:  MDQIKDASSFFLWEDSADSEVDKLLSHPPHELESAVDDADDQEDACSCSCNNNDFSID-----DFQDAYDGDNGDG--DQDIGLIRDGGRRRSGAG--YE
        MDQIKDASSFFLWEDSADSEVDKLLSH PHELESAVDD DDQEDACSCSCNNNDFSID     DFQD  DGDNGD   DQDI LI DGGRRRSGA   Y 
Subjt:  MDQIKDASSFFLWEDSADSEVDKLLSHPPHELESAVDDADDQEDACSCSCNNNDFSID-----DFQDAYDGDNGDG--DQDIGLIRDGGRRRSGAG--YE

Query:  EEEEEEEEEESSNNDVGVIRNMNEMEDKVFWDTCMAGGYP
         EEEEEEEEE S++DVGVIRNMNEMEDK+FWDTCMAGGYP
Subjt:  EEEEEEEEEESSNNDVGVIRNMNEMEDKVFWDTCMAGGYP

A0A5E4EN68 PREDICTED: LOC1106016472.5e-0740.77Show/hide
Query:  DASSFFLWEDSADSEVDKLLSHPPHELESAVDDADDQEDACSCS---CNNNDFSIDDFQDAYDGDNGDGDQDIGLIRDGGRRRSGAGYEEEEEEEEEEES
        D S FFLWEDSADSE D        +  S ++ A + EDA SCS    +++ F   +  D+Y  +  +  Q     + G +  +G+GYEE+EEEE E   
Subjt:  DASSFFLWEDSADSEVDKLLSHPPHELESAVDDADDQEDACSCS---CNNNDFSIDDFQDAYDGDNGDGDQDIGLIRDGGRRRSGAGYEEEEEEEEEEES

Query:  SNNDVGVIRNMNEM-EDKVFWDTCMAGGYP
        S     V ++M+EM ED++FW+TCMA GYP
Subjt:  SNNDVGVIRNMNEM-EDKVFWDTCMAGGYP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACCAAATCAAAGATGCTTCTTCGTTTTTTCTATGGGAAGATAGTGCAGATTCTGAGGTTGATAAATTACTGTCTCATCCTCCGCATGAATTAGAGTCTGCTGTGGA
TGATGCTGATGATCAGGAAGATGCTTGCTCCTGCAGTTGCAATAACAATGATTTTTCTATCGATGATTTTCAAGATGCATATGACGGGGATAATGGTGATGGAGATCAAG
ACATTGGTTTGATCCGTGACGGCGGAAGGCGGCGGAGCGGGGCTGGTTACGAAGAAGAGGAGGAAGAAGAAGAAGAAGAAGAGTCGAGTAATAATGATGTGGGTGTGATT
CGGAATATGAATGAAATGGAAGATAAGGTCTTTTGGGACACTTGCATGGCTGGAGGGTACCCCTGA
mRNA sequenceShow/hide mRNA sequence
AATAATCAATATCCCACCATATATGGACCAAATCAAAGATGCTTCTTCGTTTTTTCTATGGGAAGATAGTGCAGATTCTGAGGTTGATAAATTACTGTCTCATCCTCCGC
ATGAATTAGAGTCTGCTGTGGATGATGCTGATGATCAGGAAGATGCTTGCTCCTGCAGTTGCAATAACAATGATTTTTCTATCGATGATTTTCAAGATGCATATGACGGG
GATAATGGTGATGGAGATCAAGACATTGGTTTGATCCGTGACGGCGGAAGGCGGCGGAGCGGGGCTGGTTACGAAGAAGAGGAGGAAGAAGAAGAAGAAGAAGAGTCGAG
TAATAATGATGTGGGTGTGATTCGGAATATGAATGAAATGGAAGATAAGGTCTTTTGGGACACTTGCATGGCTGGAGGGTACCCCTGATGAGTAATCTTTGCTTCTTCTG
TCCTAAACCCTAAATCTGATTTTTAGTTACAAAACCATGTTCTATTCTATTTGGATCCATTCATATTTGAATTTCTAAATTTGTTTGTTTTTTTCTCTAATGAGTTGCTA
CAAGTTTGGAAGGGAAAAATTTAGAACTTACAACGGTCTCTCAATGCATATACGTCAATTCCGTTCA
Protein sequenceShow/hide protein sequence
MDQIKDASSFFLWEDSADSEVDKLLSHPPHELESAVDDADDQEDACSCSCNNNDFSIDDFQDAYDGDNGDGDQDIGLIRDGGRRRSGAGYEEEEEEEEEEESSNNDVGVI
RNMNEMEDKVFWDTCMAGGYP