; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI06G05590 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G05590
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUbiquitin-related modifier 1 homolog
Genome locationChr6:5060558..5061487
RNA-Seq ExpressionCSPI06G05590
SyntenyCSPI06G05590
Gene Ontology termsGO:0002098 - tRNA wobble uridine modification (biological process)
GO:0032447 - protein urmylation (biological process)
GO:0034227 - tRNA thio-modification (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005829 - cytosol (cellular component)
GO:0031386 - protein tag (molecular function)
InterPro domainsIPR012675 - Beta-grasp domain superfamily
IPR015221 - Ubiquitin-related modifier 1
IPR016155 - Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040023.1 ubiquitin-related modifier 1-like protein 2 [Cucumis melo var. makuwa]1.0e-5098.02Show/hide
Query:  MTLILDFKCSGGLELLCNSVKIHNVSIDPENGVGKFIMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHG
        MTL LDFKCSGGLELLCNSVKIHNVSIDPENGVGK IMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHG
Subjt:  MTLILDFKCSGGLELLCNSVKIHNVSIDPENGVGKFIMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHG

Query:  G
        G
Subjt:  G

KAG7026033.1 Ubiquitin-related modifier 1-like 2, partial [Cucurbita argyrosperma subsp. argyrosperma]8.1e-4892.08Show/hide
Query:  MTLILDFKCSGGLELLCNSVKIHNVSIDPENGVGKFIMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHG
        MT+IL FKCSGGLELLC+SVKIHNVSI+PENG GK +MKDLLSWVR+NLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHG
Subjt:  MTLILDFKCSGGLELLCNSVKIHNVSIDPENGVGKFIMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHG

Query:  G
        G
Subjt:  G

XP_004144991.1 ubiquitin-related modifier 1 homolog 2 [Cucumis sativus]3.4e-4693.07Show/hide
Query:  MTLILDFKCSGGLELLCNSVKIHNVSIDPENGVGKFIMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHG
        M L L+F   GGLELLCNSVKIHNVSIDPENGVGKFIMKDLLSWVR+NLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHG
Subjt:  MTLILDFKCSGGLELLCNSVKIHNVSIDPENGVGKFIMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHG

Query:  G
        G
Subjt:  G

XP_022145475.1 ubiquitin-related modifier 1 homolog 2 isoform X1 [Momordica charantia]2.1e-4893.07Show/hide
Query:  MTLILDFKCSGGLELLCNSVKIHNVSIDPENGVGKFIMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHG
        MT++L FKCSGGLELLCNSVKIHNVSIDPENG GK IMKDLLSWVR NLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDT LEEKDVVVFISTLHG
Subjt:  MTLILDFKCSGGLELLCNSVKIHNVSIDPENGVGKFIMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHG

Query:  G
        G
Subjt:  G

XP_038876424.1 ubiquitin-related modifier 1 homolog 2 isoform X2 [Benincasa hispida]4.3e-4995.05Show/hide
Query:  MTLILDFKCSGGLELLCNSVKIHNVSIDPENGVGKFIMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHG
        MT+IL FKCSGGLELLC+SVKIHNVSIDPENGVGK IMKDLLSWVR NLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHG
Subjt:  MTLILDFKCSGGLELLCNSVKIHNVSIDPENGVGKFIMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHG

Query:  G
        G
Subjt:  G

TrEMBL top hitse value%identityAlignment
A0A0A0KCT7 Ubiquitin-related modifier 1 homolog5.8e-5299.01Show/hide
Query:  MTLILDFKCSGGLELLCNSVKIHNVSIDPENGVGKFIMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHG
        MTLILDFKCSGGLELLCNSVKIHNVSIDPENGVGKFIMKDLLSWVR+NLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHG
Subjt:  MTLILDFKCSGGLELLCNSVKIHNVSIDPENGVGKFIMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHG

Query:  G
        G
Subjt:  G

A0A1S3CCC7 Ubiquitin-related modifier 1 homolog3.7e-4693.07Show/hide
Query:  MTLILDFKCSGGLELLCNSVKIHNVSIDPENGVGKFIMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHG
        M L L+F   GGLELLCNSVKIHNVSIDPENGVGK IMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHG
Subjt:  MTLILDFKCSGGLELLCNSVKIHNVSIDPENGVGKFIMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHG

Query:  G
        G
Subjt:  G

A0A5D3DLM7 Ubiquitin-related modifier 1 homolog4.9e-5198.02Show/hide
Query:  MTLILDFKCSGGLELLCNSVKIHNVSIDPENGVGKFIMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHG
        MTL LDFKCSGGLELLCNSVKIHNVSIDPENGVGK IMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHG
Subjt:  MTLILDFKCSGGLELLCNSVKIHNVSIDPENGVGKFIMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHG

Query:  G
        G
Subjt:  G

A0A6J1CUK8 Ubiquitin-related modifier 1 homolog1.0e-4893.07Show/hide
Query:  MTLILDFKCSGGLELLCNSVKIHNVSIDPENGVGKFIMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHG
        MT++L FKCSGGLELLCNSVKIHNVSIDPENG GK IMKDLLSWVR NLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDT LEEKDVVVFISTLHG
Subjt:  MTLILDFKCSGGLELLCNSVKIHNVSIDPENGVGKFIMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHG

Query:  G
        G
Subjt:  G

A0A6J1KGQ8 Ubiquitin-related modifier 1 homolog1.5e-4489.11Show/hide
Query:  MTLILDFKCSGGLELLCNSVKIHNVSIDPENGVGKFIMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHG
        M L L+F   GGLELLC+SVKIHNVSI+PENGVGK +MKDLLSWVR+NLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHG
Subjt:  MTLILDFKCSGGLELLCNSVKIHNVSIDPENGVGKFIMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHG

Query:  G
        G
Subjt:  G

SwissProt top hitse value%identityAlignment
A0MDQ1 Ubiquitin-related modifier 1 homolog 19.3e-3976.7Show/hide
Query:  MTLILDFKCSGGLELLCNSVKIHNVSIDPENGVGK--FIMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTL
        M L L+F   GGLELLC+S KIH V++D  NG     F MK LLSWVR NLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDT +E+KDVVVFISTL
Subjt:  MTLILDFKCSGGLELLCNSVKIHNVSIDPENGVGK--FIMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTL

Query:  HGG
        HGG
Subjt:  HGG

B3H7G2 Ubiquitin-related modifier 1 homolog 23.2e-3978.22Show/hide
Query:  MTLILDFKCSGGLELLCNSVKIHNVSIDPENGVGKFIMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHG
        M   L+F   GGLELLC+SVKIH V+I+  N      MKDLLSWVR NLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLE+KDV+VFISTLHG
Subjt:  MTLILDFKCSGGLELLCNSVKIHNVSIDPENGVGKFIMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHG

Query:  G
        G
Subjt:  G

B6SXH2 Ubiquitin-related modifier 1 homolog2.6e-3369.9Show/hide
Query:  MTLILDFKCSGGLELLC-NSVKIHNVSI-DPENGVGKFIMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTL
        M L L+F   GGLELL  NS K+H V +  P++G GK  MK LLSWV+ NLIKERPEMF+K D+VRPGVLVL+NDCDWEL G LD  LEEKDVVVFISTL
Subjt:  MTLILDFKCSGGLELLC-NSVKIHNVSI-DPENGVGKFIMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTL

Query:  HGG
        HGG
Subjt:  HGG

Q0D6M1 Ubiquitin-related modifier 1 homolog4.8e-3569.61Show/hide
Query:  MTLILDFKCSGGLELLC-NSVKIHNVSIDPENGVGKFIMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLH
        M L L+F   GGLELL   S K+H V + P +G GK +MK LL+WV++NLIKERPEMF+KGD+VRPGVLVL+NDCDWEL G LD  LEEKDVVVFISTLH
Subjt:  MTLILDFKCSGGLELLC-NSVKIHNVSIDPENGVGKFIMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLH

Query:  GG
        GG
Subjt:  GG

Q7GBC8 Ubiquitin-related modifier 1 homolog4.8e-3569.61Show/hide
Query:  MTLILDFKCSGGLELLC-NSVKIHNVSIDPENGVGKFIMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLH
        M L L+F   GGLELL   S K+H V + P +G GK +MK LL+WV++NLIKERPEMF+KGD+VRPGVLVL+NDCDWEL G LD  LEEKDVVVFISTLH
Subjt:  MTLILDFKCSGGLELLC-NSVKIHNVSIDPENGVGKFIMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLH

Query:  GG
        GG
Subjt:  GG

Arabidopsis top hitse value%identityAlignment
AT2G45695.1 Ubiquitin related modifier 16.6e-4076.7Show/hide
Query:  MTLILDFKCSGGLELLCNSVKIHNVSIDPENGVGK--FIMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTL
        M L L+F   GGLELLC+S KIH V++D  NG     F MK LLSWVR NLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDT +E+KDVVVFISTL
Subjt:  MTLILDFKCSGGLELLCNSVKIHNVSIDPENGVGK--FIMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTL

Query:  HGG
        HGG
Subjt:  HGG

AT3G61113.1 Ubiquitin related modifier 12.3e-4078.22Show/hide
Query:  MTLILDFKCSGGLELLCNSVKIHNVSIDPENGVGKFIMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHG
        M   L+F   GGLELLC+SVKIH V+I+  N      MKDLLSWVR NLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLE+KDV+VFISTLHG
Subjt:  MTLILDFKCSGGLELLCNSVKIHNVSIDPENGVGKFIMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHG

Query:  G
        G
Subjt:  G


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATTAATATTAGACTTTAAATGCAGTGGGGGGTTGGAGTTACTATGTAACTCTGTAAAGATCCATAATGTCAGCATTGATCCCGAAAATGGAGTGGGAAAGTTCAT
TATGAAGGATTTGCTCTCTTGGGTTCGAGCTAACCTGATCAAGGAAAGGCCGGAAATGTTTATGAAAGGCGACACTGTAAGACCTGGTGTTCTGGTGCTTGTAAATGATT
GTGATTGGGAGCTTAGTGGGCAGCTTGACACAACATTGGAAGAGAAAGACGTGGTAGTGTTCATATCCACCTTGCATGGAGGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGACATTAATATTAGACTTTAAATGCAGTGGGGGGTTGGAGTTACTATGTAACTCTGTAAAGATCCATAATGTCAGCATTGATCCCGAAAATGGAGTGGGAAAGTTCAT
TATGAAGGATTTGCTCTCTTGGGTTCGAGCTAACCTGATCAAGGAAAGGCCGGAAATGTTTATGAAAGGCGACACTGTAAGACCTGGTGTTCTGGTGCTTGTAAATGATT
GTGATTGGGAGCTTAGTGGGCAGCTTGACACAACATTGGAAGAGAAAGACGTGGTAGTGTTCATATCCACCTTGCATGGAGGCTAGCTTCTTCAGTAAAACCTTTTTCAT
TATGTATCTACTAAACAGTGTATTTTTTATGAACTTCCTCCCACCATATGATATGGACACATTATTACCTTAAAATGTATACATGGTAATCTCGATCAAATTTTGCTCTG
AGGCTTGTGAAATCATTTCTTTGGGTGGATACTCATGTTGATTAACTGAATAAAGTTGAAGGAAGGGTATATTTTAGGACGTGTTAGTTATATTCTAAGTTTCTATTGTT
TCAACAGTTCTTTTCAGTCTTTAAAAAAGACAGTCCTGTTGTAGTTCGTGAGGCCACACGTGCCTGCATTCTTCAACTATTCTTGATGGATGTCCTGGC
Protein sequenceShow/hide protein sequence
MTLILDFKCSGGLELLCNSVKIHNVSIDPENGVGKFIMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG