; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI06G05840 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G05840
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr6:5216429..5216791
RNA-Seq ExpressionCSPI06G05840
SyntenyCSPI06G05840
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040002.1 hypothetical protein E6C27_scaffold122G002850 [Cucumis melo var. makuwa]3.3e-3275Show/hide
Query:  MVSFTHRNVVNQSMEIVLVVKLSHASMFLASNTIILILFGKKLKRLSSKEEEGERGKDCCSGCSDDHELNSYEMICVEDSCDEDYCEEGMIQDDLEKKAQ
        MVS  HRN + + +EI+ VVK S ASMFLASNTI+LILF +KLKRLSSKE+E    KD CS  SD  ELNS E+ICVEDSCDE  CEEG IQDDLEKKAQ
Subjt:  MVSFTHRNVVNQSMEIVLVVKLSHASMFLASNTIILILFGKKLKRLSSKEEEGERGKDCCSGCSDDHELNSYEMICVEDSCDEDYCEEGMIQDDLEKKAQ

Query:  EFIDMMNAFWREELIHDRFL
        EFIDMMNAFWREELIHDRFL
Subjt:  EFIDMMNAFWREELIHDRFL

KAE8646698.1 hypothetical protein Csa_005140 [Cucumis sativus]6.2e-5595Show/hide
Query:  MVSFTHRNVVNQSMEIVLVVKLSHASMFLASNTIILILFGKKLKRLSSKEEEGERGKDCCSGCSDDHELNSYEMICVEDSCDEDYCEEGMIQDDLEKKAQ
        MVSFTHRNVVNQSMEIVLVVK S AS+FLASNTIILILFGKKLK+LSSKEEE ER KDCCSGCSDDHELNSYEMICVEDSCDEDYCEEGMIQDDLEKKAQ
Subjt:  MVSFTHRNVVNQSMEIVLVVKLSHASMFLASNTIILILFGKKLKRLSSKEEEGERGKDCCSGCSDDHELNSYEMICVEDSCDEDYCEEGMIQDDLEKKAQ

Query:  EFIDMMNAFWREELIHDRFL
        EFIDMMNAFWREELIHDRFL
Subjt:  EFIDMMNAFWREELIHDRFL

KAG6593708.1 hypothetical protein SDJN03_13184, partial [Cucurbita argyrosperma subsp. sororia]2.8e-0751.72Show/hide
Query:  ILILFGKKLKRLSSKEEE-GERGKDCCSGCSDDHELNSYEMICVEDSCDEDYCEEGMIQDDLEKKAQEFIDMMNAFWREELIHDRFL
        + ILFG+K K+  S+E+  GE+ +        D EL ++  I V DSCDED  E    QDD EKKAQEFI+MM +FWREEL+ DRFL
Subjt:  ILILFGKKLKRLSSKEEE-GERGKDCCSGCSDDHELNSYEMICVEDSCDEDYCEEGMIQDDLEKKAQEFIDMMNAFWREELIHDRFL

TrEMBL top hitse value%identityAlignment
A0A0A0K9S4 Uncharacterized protein3.0e-5595Show/hide
Query:  MVSFTHRNVVNQSMEIVLVVKLSHASMFLASNTIILILFGKKLKRLSSKEEEGERGKDCCSGCSDDHELNSYEMICVEDSCDEDYCEEGMIQDDLEKKAQ
        MVSFTHRNVVNQSMEIVLVVK S AS+FLASNTIILILFGKKLK+LSSKEEE ER KDCCSGCSDDHELNSYEMICVEDSCDEDYCEEGMIQDDLEKKAQ
Subjt:  MVSFTHRNVVNQSMEIVLVVKLSHASMFLASNTIILILFGKKLKRLSSKEEEGERGKDCCSGCSDDHELNSYEMICVEDSCDEDYCEEGMIQDDLEKKAQ

Query:  EFIDMMNAFWREELIHDRFL
        EFIDMMNAFWREELIHDRFL
Subjt:  EFIDMMNAFWREELIHDRFL

A0A5A7T9A6 Uncharacterized protein1.6e-3275Show/hide
Query:  MVSFTHRNVVNQSMEIVLVVKLSHASMFLASNTIILILFGKKLKRLSSKEEEGERGKDCCSGCSDDHELNSYEMICVEDSCDEDYCEEGMIQDDLEKKAQ
        MVS  HRN + + +EI+ VVK S ASMFLASNTI+LILF +KLKRLSSKE+E    KD CS  SD  ELNS E+ICVEDSCDE  CEEG IQDDLEKKAQ
Subjt:  MVSFTHRNVVNQSMEIVLVVKLSHASMFLASNTIILILFGKKLKRLSSKEEEGERGKDCCSGCSDDHELNSYEMICVEDSCDEDYCEEGMIQDDLEKKAQ

Query:  EFIDMMNAFWREELIHDRFL
        EFIDMMNAFWREELIHDRFL
Subjt:  EFIDMMNAFWREELIHDRFL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAGTTTCACGCATCGAAACGTTGTCAATCAATCGATGGAAATCGTTTTGGTAGTGAAATTGAGTCATGCGTCGATGTTCCTTGCATCTAACACCATCATTTTGAT
CCTCTTTGGGAAGAAGTTGAAGCGGTTATCGAGCAAAGAAGAAGAAGGAGAAAGGGGTAAAGATTGTTGTAGTGGGTGTAGTGATGATCATGAGTTGAATAGTTATGAGA
TGATTTGTGTTGAAGATAGTTGTGATGAAGATTATTGTGAAGAAGGGATGATTCAAGATGATTTAGAGAAGAAGGCTCAAGAGTTTATTGATATGATGAATGCTTTTTGG
AGGGAAGAGTTGATTCATGATAGGTTTCTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGAGTTTCACGCATCGAAACGTTGTCAATCAATCGATGGAAATCGTTTTGGTAGTGAAATTGAGTCATGCGTCGATGTTCCTTGCATCTAACACCATCATTTTGAT
CCTCTTTGGGAAGAAGTTGAAGCGGTTATCGAGCAAAGAAGAAGAAGGAGAAAGGGGTAAAGATTGTTGTAGTGGGTGTAGTGATGATCATGAGTTGAATAGTTATGAGA
TGATTTGTGTTGAAGATAGTTGTGATGAAGATTATTGTGAAGAAGGGATGATTCAAGATGATTTAGAGAAGAAGGCTCAAGAGTTTATTGATATGATGAATGCTTTTTGG
AGGGAAGAGTTGATTCATGATAGGTTTCTTTAG
Protein sequenceShow/hide protein sequence
MVSFTHRNVVNQSMEIVLVVKLSHASMFLASNTIILILFGKKLKRLSSKEEEGERGKDCCSGCSDDHELNSYEMICVEDSCDEDYCEEGMIQDDLEKKAQEFIDMMNAFW
REELIHDRFL